Csa4G663650.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G663650.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	SnRK1-interacting protein 1
Location	Chr4 : 23033366 .. 23033995 (+)
Sequence length	630

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCCAAACGTATGCTCATTCCCAGCTCTCAGGACCTCACCTCACTGCCTTATCCTCCATACTCTCTTCCTACTCAACTAGTGAGATTCGACTCCCTCTAACTTCTACTACTTCAAGACGACGCCATCTTCGTCTTGTTTGCTCCAGCAGTGATGCTAATAGTAATAAGAAGGGAGTACCCAATTCCAACTATGTTGTTCCACTTAATAAATCTTTTTCCCCAGCTAACTCATCTTGCATCACTCGACCCCTTGCTGAGATCCTCCGCGATCTAAACAAGAGAATCCCCGATAACATCGCTCAGAAAGCCCCTCATTCTGACACCAATGATCGTTCTCCTGCCACTTTCATCCCTTGGTTTCATGCTAATAGGATGTTGAGTTTCTATGCCCCTGGATGGTGTGGAGAGATACGAGATGTCATATTTTCAGACAATGGTAGTGTAACTGTGGTATATCGTGTGACTGTTCGAGGATCGGATGGAGAAGCACATCGTGAATCGACAGGAACTGTCTCAGCTACTGATAGCAATATTGAGGATCCTGTAGCTGCTGCAGAGGAAATAGCTTTTTGCAAGGCTTGTGCGAGATTTGGCCTCGGTTTGTACCTCTATCATGAAGAATGA

mRNA sequence

ATGGCTCTCCAAACGTATGCTCATTCCCAGCTCTCAGGACCTCACCTCACTGCCTTATCCTCCATACTCTCTTCCTACTCAACTAGTGAGATTCGACTCCCTCTAACTTCTACTACTTCAAGACGACGCCATCTTCGTCTTGTTTGCTCCAGCAGTGATGCTAATAGTAATAAGAAGGGAGTACCCAATTCCAACTATGTTGTTCCACTTAATAAATCTTTTTCCCCAGCTAACTCATCTTGCATCACTCGACCCCTTGCTGAGATCCTCCGCGATCTAAACAAGAGAATCCCCGATAACATCGCTCAGAAAGCCCCTCATTCTGACACCAATGATCGTTCTCCTGCCACTTTCATCCCTTGGTTTCATGCTAATAGGATGTTGAGTTTCTATGCCCCTGGATGGTGTGGAGAGATACGAGATGTCATATTTTCAGACAATGGTAGTGTAACTGTGGTATATCGTGTGACTGTTCGAGGATCGGATGGAGAAGCACATCGTGAATCGACAGGAACTGTCTCAGCTACTGATAGCAATATTGAGGATCCTGTAGCTGCTGCAGAGGAAATAGCTTTTTGCAAGGCTTGTGCGAGATTTGGCCTCGGTTTGTACCTCTATCATGAAGAATGA

Coding sequence (CDS)

ATGGCTCTCCAAACGTATGCTCATTCCCAGCTCTCAGGACCTCACCTCACTGCCTTATCCTCCATACTCTCTTCCTACTCAACTAGTGAGATTCGACTCCCTCTAACTTCTACTACTTCAAGACGACGCCATCTTCGTCTTGTTTGCTCCAGCAGTGATGCTAATAGTAATAAGAAGGGAGTACCCAATTCCAACTATGTTGTTCCACTTAATAAATCTTTTTCCCCAGCTAACTCATCTTGCATCACTCGACCCCTTGCTGAGATCCTCCGCGATCTAAACAAGAGAATCCCCGATAACATCGCTCAGAAAGCCCCTCATTCTGACACCAATGATCGTTCTCCTGCCACTTTCATCCCTTGGTTTCATGCTAATAGGATGTTGAGTTTCTATGCCCCTGGATGGTGTGGAGAGATACGAGATGTCATATTTTCAGACAATGGTAGTGTAACTGTGGTATATCGTGTGACTGTTCGAGGATCGGATGGAGAAGCACATCGTGAATCGACAGGAACTGTCTCAGCTACTGATAGCAATATTGAGGATCCTGTAGCTGCTGCAGAGGAAATAGCTTTTTGCAAGGCTTGTGCGAGATTTGGCCTCGGTTTGTACCTCTATCATGAAGAATGA

Protein sequence

MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE*

Homology

[Close]

BLAST of Csa4G663650.1 vs. TrEMBL
Match: A0A0A0L5X0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G663650 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.3e-115
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60
           MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG
Sbjct: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

[Close]

BLAST of Csa4G663650.1 vs. TrEMBL
Match: M5XSU2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011537mg PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-67
Identity = 128/160 (80.00%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 50  SSSDANSNKKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSD 109
           SSSD      GVPNSNYVVPL+KSFS +NSSCITRPLAEILRDLNKRIPDNI Q  PH  
Sbjct: 54  SSSDGGKKAGGVPNSNYVVPLDKSFSSSNSSCITRPLAEILRDLNKRIPDNIIQAPPHHH 113

Query: 110 TNDRSPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRES 169
           +      TFIPW+HANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVT+RGSDGEAHRES
Sbjct: 114 S------TFIPWYHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTIRGSDGEAHRES 173

Query: 170 TGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           TGTVS +D    DPV AAEEIAFC+ACARFGLGLYLYHE+
Sbjct: 174 TGTVSPSDGRNADPVTAAEEIAFCRACARFGLGLYLYHED 207

[Close]

BLAST of Csa4G663650.1 vs. TrEMBL
Match: A0A067JHB6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23055 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-67
Identity = 142/208 (68.27%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 14  PHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCS-----------SSDANSNKKGVP 73
           P L  LS+   S S+ E +       + R  LRLVC+           SSD N  KKGVP
Sbjct: 16  PPLFPLSTCRMSSSSFEDKFGGVCVGNGRSKLRLVCAVGGNTANNNSNSSDGNK-KKGVP 75

Query: 74  NSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPAT-FIPW 133
           NSNYVVPL+KSFS + SSCITRPLAEILRDLNKRIPDNI + +        SP T +IPW
Sbjct: 76  NSNYVVPLDKSFSSSYSSCITRPLAEILRDLNKRIPDNIIKPS--------SPVTTYIPW 135

Query: 134 FHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNIE 193
           +HANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVT+RGSDGEA+RESTGTV ++D NI 
Sbjct: 136 YHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTIRGSDGEAYRESTGTVLSSDGNIV 195

Query: 194 DPVAAAEEIAFCKACARFGLGLYLYHEE 210
           DPVAAAEEIAFC+ACARFGLGLYLYHEE
Sbjct: 196 DPVAAAEEIAFCRACARFGLGLYLYHEE 214

[Close]

BLAST of Csa4G663650.1 vs. TrEMBL
Match: B9RG45_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1439020 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.5e-66
Identity = 134/185 (72.43%), Postives = 146/185 (78.92%), Query Frame = 1


Query: 40  SRRRHLRLVCSSSDANSN---------------KKGVPNSNYVVPLNKSFSPANSSCITR 99
           +RRR  R+VC S+  N+N               KKGVPNSNYVVPL+KSFS + SSCITR
Sbjct: 46  NRRRLRRVVCGSNGNNNNSEVGGGGTGTGNTNKKKGVPNSNYVVPLDKSFSSSYSSCITR 105

Query: 100 PLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIPWFHANRMLSFYAPGWCGEIRDVIF 159
           PLAEILRDLNKRIPDNI   +           TFIPW+HANRMLSFYAPGWCGEIRDVIF
Sbjct: 106 PLAEILRDLNKRIPDNIITPSN----------TFIPWYHANRMLSFYAPGWCGEIRDVIF 165

Query: 160 SDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLY 210
           SDNGSVTVVYRVT+RGSDGEA+RESTGTVS +D +I DPVAAAEEIAFCKACARFGLGLY
Sbjct: 166 SDNGSVTVVYRVTIRGSDGEAYRESTGTVSPSDGHIVDPVAAAEEIAFCKACARFGLGLY 220

[Close]

BLAST of Csa4G663650.1 vs. TrEMBL
Match: A0A0B0PCR4_GOSAR (Leucine--tRNA ligase OS=Gossypium arboreum GN=F383_30234 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.5e-66
Identity = 125/167 (74.85%), Postives = 146/167 (87.43%), Query Frame = 1


Query: 46  RLVCSSSDANSN---KKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIA 105
           RL CSS++ NSN   KKGVP+SNYVVPL KSFSP+NSSCITRPL EILRDLNKRIP NI 
Sbjct: 40  RLHCSSNNNNSNCDAKKGVPDSNYVVPLEKSFSPSNSSCITRPLIEILRDLNKRIPHNII 99

Query: 106 QKAPHSDTNDRSPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSD 165
           +  P+S       +TF+PW+HANRMLSFYAPGWCGE+RDVIF++NG++TVVYR+T+RGSD
Sbjct: 100 KSPPNS-------STFLPWYHANRMLSFYAPGWCGEVRDVIFANNGTITVVYRLTIRGSD 159

Query: 166 GEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           GEAHRESTGTVS++  N+ DPV+AAEEIAFC+ACARFGLGLYLYHEE
Sbjct: 160 GEAHRESTGTVSSSKINMVDPVSAAEEIAFCRACARFGLGLYLYHEE 199

[Close]

BLAST of Csa4G663650.1 vs. TAIR10
Match: AT5G47870.1 (AT5G47870.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-62
Identity = 122/196 (62.24%), Postives = 145/196 (73.98%), Query Frame = 1


Query: 17  TALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSN----KKGVPNSNYVVPLNK 76
           T+ +  +SS ST+  R+ L+   +   +  + CS           KK VPNSNYVVP++K
Sbjct: 8   TSAAFTISSPSTAAARIKLSPFRTVAVNRGVRCSGGGVGGGDAGKKKAVPNSNYVVPIDK 67

Query: 77  SFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIPWFHANRMLSFYA 136
             S   SS ITRPL EILRDLNK+IPDNI  K+    +   + + FIPW+HANRMLSFYA
Sbjct: 68  FSS---SSSITRPLIEILRDLNKKIPDNIV-KSHDPPSTSAATSGFIPWYHANRMLSFYA 127

Query: 137 PGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAF 196
           PGWCGE+RDVIFS+NG+VTVVYR+T+RGSDGEAHRESTGTV+ TD +IEDPV AAEEIAF
Sbjct: 128 PGWCGEVRDVIFSENGNVTVVYRLTIRGSDGEAHRESTGTVTTTDDHIEDPVTAAEEIAF 187

Query: 197 CKACARFGLGLYLYHE 209
           C+ACARFGLGLYLYHE
Sbjct: 188 CRACARFGLGLYLYHE 199

[Close]

BLAST of Csa4G663650.1 vs. TAIR10
Match: AT1G71310.2 (AT1G71310.2 cobalt ion binding)

HSP 1 Score: 132.5 bits (332), Expect = 3.0e-31
Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 1


Query: 79  SSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIPWFHANRMLSFYAPGWCGE 138
           +S I+RPLAEIL++LNK++PD++ +    +   D     +IPW   NR+++ +AP W GE
Sbjct: 47  TSGISRPLAEILKELNKKVPDSVIR----TRVEDGCSIKYIPWHIVNRIMNMHAPEWSGE 106

Query: 139 IRDVIFSDNG-SVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACA 198
           +R V +S +G +VTV YRVT+ G+D E  RESTGT S  D    D V  AE +AF +ACA
Sbjct: 107 VRSVTYSPDGNTVTVAYRVTLYGTDAEIFRESTGTTSVDDKGYGDAVQKAEAMAFRRACA 166

Query: 199 RFGLGLYLYHEE 210
           RFGLGL+LYHE+
Sbjct: 167 RFGLGLHLYHED 174

[Close]

BLAST of Csa4G663650.1 vs. NCBI nr
Match: gi|449455607|ref|XP_004145544.1| (PREDICTED: uncharacterized protein LOC101203655 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 1.9e-115
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60
           MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG
Sbjct: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

[Close]

BLAST of Csa4G663650.1 vs. NCBI nr
Match: gi|659104708|ref|XP_008452970.1| (PREDICTED: uncharacterized protein LOC103493818 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 3.1e-110
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 1


Query: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60
           MALQTYAHSQL GPH TALSSI SSYSTSEIRLPL+STTSRR HLRLVCSSSDANS+KKG
Sbjct: 1   MALQTYAHSQLLGPHPTALSSIHSSYSTSEIRLPLSSTTSRRPHLRLVCSSSDANSSKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDT+DRSP TFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRSPTTFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

[Close]

BLAST of Csa4G663650.1 vs. NCBI nr
Match: gi|802754196|ref|XP_012088661.1| (PREDICTED: uncharacterized protein LOC105647255 [Jatropha curcas])

HSP 1 Score: 262.7 bits (670), Expect = 5.5e-67
Identity = 142/208 (68.27%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 14  PHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCS-----------SSDANSNKKGVP 73
           P L  LS+   S S+ E +       + R  LRLVC+           SSD N  KKGVP
Sbjct: 16  PPLFPLSTCRMSSSSFEDKFGGVCVGNGRSKLRLVCAVGGNTANNNSNSSDGNK-KKGVP 75

Query: 74  NSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPAT-FIPW 133
           NSNYVVPL+KSFS + SSCITRPLAEILRDLNKRIPDNI + +        SP T +IPW
Sbjct: 76  NSNYVVPLDKSFSSSYSSCITRPLAEILRDLNKRIPDNIIKPS--------SPVTTYIPW 135

Query: 134 FHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNIE 193
           +HANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVT+RGSDGEA+RESTGTV ++D NI 
Sbjct: 136 YHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTIRGSDGEAYRESTGTVLSSDGNIV 195

Query: 194 DPVAAAEEIAFCKACARFGLGLYLYHEE 210
           DPVAAAEEIAFC+ACARFGLGLYLYHEE
Sbjct: 196 DPVAAAEEIAFCRACARFGLGLYLYHEE 214

[Close]

BLAST of Csa4G663650.1 vs. NCBI nr
Match: gi|596188147|ref|XP_007223444.1| (hypothetical protein PRUPE_ppa011537mg [Prunus persica])

HSP 1 Score: 262.7 bits (670), Expect = 5.5e-67
Identity = 128/160 (80.00%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 50  SSSDANSNKKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSD 109
           SSSD      GVPNSNYVVPL+KSFS +NSSCITRPLAEILRDLNKRIPDNI Q  PH  
Sbjct: 54  SSSDGGKKAGGVPNSNYVVPLDKSFSSSNSSCITRPLAEILRDLNKRIPDNIIQAPPHHH 113

Query: 110 TNDRSPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRES 169
           +      TFIPW+HANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVT+RGSDGEAHRES
Sbjct: 114 S------TFIPWYHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTIRGSDGEAHRES 173

Query: 170 TGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           TGTVS +D    DPV AAEEIAFC+ACARFGLGLYLYHE+
Sbjct: 174 TGTVSPSDGRNADPVTAAEEIAFCRACARFGLGLYLYHED 207

[Close]

BLAST of Csa4G663650.1 vs. NCBI nr
Match: gi|255543302|ref|XP_002512714.1| (PREDICTED: uncharacterized protein LOC8285737 [Ricinus communis])

HSP 1 Score: 260.0 bits (663), Expect = 3.6e-66
Identity = 134/185 (72.43%), Postives = 146/185 (78.92%), Query Frame = 1


Query: 40  SRRRHLRLVCSSSDANSN---------------KKGVPNSNYVVPLNKSFSPANSSCITR 99
           +RRR  R+VC S+  N+N               KKGVPNSNYVVPL+KSFS + SSCITR
Sbjct: 46  NRRRLRRVVCGSNGNNNNSEVGGGGTGTGNTNKKKGVPNSNYVVPLDKSFSSSYSSCITR 105

Query: 100 PLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIPWFHANRMLSFYAPGWCGEIRDVIF 159
           PLAEILRDLNKRIPDNI   +           TFIPW+HANRMLSFYAPGWCGEIRDVIF
Sbjct: 106 PLAEILRDLNKRIPDNIITPSN----------TFIPWYHANRMLSFYAPGWCGEIRDVIF 165

Query: 160 SDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLY 210
           SDNGSVTVVYRVT+RGSDGEA+RESTGTVS +D +I DPVAAAEEIAFCKACARFGLGLY
Sbjct: 166 SDNGSVTVVYRVTIRGSDGEAYRESTGTVSPSDGHIVDPVAAAEEIAFCKACARFGLGLY 220

The following BLAST results are available for this feature:

BLAST of Csa4G663650.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5X0_CUCSA	1.3e-115	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G663650 PE=4 SV=1	[more]
M5XSU2_PRUPE	3.8e-67	80.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011537mg PE=4 SV=1	[more]
A0A067JHB6_JATCU	3.8e-67	68.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23055 PE=4 SV=1	[more]
B9RG45_RICCO	2.5e-66	72.43	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1439020 PE=4 SV=1	[more]
A0A0B0PCR4_GOSAR	2.5e-66	74.85	Leucine--tRNA ligase OS=Gossypium arboreum GN=F383_30234 PE=4 SV=1	[more]

BLAST of Csa4G663650.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47870.1	1.1e-62	62.24	FUNCTIONS IN: molecular_function unknown	[more]
AT1G71310.2	3.0e-31	50.00	cobalt ion binding	[more]

BLAST of Csa4G663650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455607\|ref\|XP_004145544.1\|	1.9e-115	100.00	PREDICTED: uncharacterized protein LOC101203655 [Cucumis sativus]	[more]
gi\|659104708\|ref\|XP_008452970.1\|	3.1e-110	96.17	PREDICTED: uncharacterized protein LOC103493818 [Cucumis melo]	[more]
gi\|802754196\|ref\|XP_012088661.1\|	5.5e-67	68.27	PREDICTED: uncharacterized protein LOC105647255 [Jatropha curcas]	[more]
gi\|596188147\|ref\|XP_007223444.1\|	5.5e-67	80.00	hypothetical protein PRUPE_ppa011537mg [Prunus persica]	[more]
gi\|255543302\|ref\|XP_002512714.1\|	3.6e-66	72.43	PREDICTED: uncharacterized protein LOC8285737 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G663650	Csa4G663650	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa4G663650.1	Csa4G663650.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G663650.1.cds1	Csa4G663650.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34050	FAMILY NOT NAMED	coord: 9..209 score: 1.4E
None	No IPR available	PANTHER	PTHR34050:SF3	SUBFAMILY NOT NAMED	coord: 9..209 score: 1.4E