Csa4G615740.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAACCCTCTTCTTCCCTCCCCGTTCGTTTTTGTTTCTCTCTTATTCCTTCTCTCATGGCTAACCCACTTCGCCAAAGTAACACGATACCAAGATTTGTGCAAGCACAACCCTACAAAATGGGCTTGAGCAGGGGTGTCGGAATAGAGGCAAAAAAAATCGCAGGATTCCTGGGGAGGTTGATGAACAAAAAGTGGATGAAGGAGAGAAATAGGGTCGTCTAAGCTGTGTGGAGGTGTTTGAAGCCGCCATTGATGAGCTTCACATGTCGTTTGGGGTTCTTAGAAGATTGAGTAGGAGGAATTTTGACACACAAATGGGGTATCTAACGACGTGGGTCAGCATTGCGCTAACGAATGAAGATATTTGCGTTAAAGGATTTGAAGGTGGAAGGGAAAAAATAGTGAATTTGCTAAGAAATGGAATGGTGAAAGTTGGTTATATTATGAGTAATGCACTTGCTTTGGTTAATAAATTGGTTGTCTCTATTTTTGAAATTGGACGGAGATTTGGAATTTCTCTTGAATTTGATGTGGAGATTGGATGTACATGTTATAAGATTATATAACTTGTAATTGTACTAATTGAAAGAATTAAAACTACATACTATTTTTTAAATGAAAATTACGTTTGGGGTTCTTTTTTTTTGTTGTGTGTGTTGAAATGAAATTATGACTGTTAATTGGGCTAGCTCCTAAAGGAGTCCCTCTAAATTTCATGTGTATCTTCCGTGGAATTCAGATTATAATGATGATGTTTTGGACAAGATAGGTTTCTTCTTTGTTGCATATGGAGATTGA ATGGCTAACCCTCTTCTTCCCTCCCCGTTCGTTTTTGTTTCTCTCTTATTCCTTCTCTCATGGCTAACCCACTTCGCCAAAGTGTTTGAAGCCGCCATTGATGAGCTTCACATGTCGTTTGGGGTTCTTAGAAGATTGAGTAGGAGGAATTTTGACACACAAATGGGGTATCTAACGACGTGGGTCAGCATTGCGCTAACGAATGAAGATATTTGCGTTAAAGGATTTGAAGGTGGAAGGGAAAAAATAGTGAATTTGCTAAGAAATGGAATGGTGAAAGTTGGTTATATTATGAGTAATGCACTTGCTTTGGTTAATAAATTGGTTGTCTCTATTTTTGAAATTGGACGGAGATTTGGAATTTCTCTTGAATTTGATGTGGAGATTGGATATTATAATGATGATGTTTTGGACAAGATAGGTTTCTTCTTTGTTGCATATGGAGATTGA ATGGCTAACCCTCTTCTTCCCTCCCCGTTCGTTTTTGTTTCTCTCTTATTCCTTCTCTCATGGCTAACCCACTTCGCCAAAGTGTTTGAAGCCGCCATTGATGAGCTTCACATGTCGTTTGGGGTTCTTAGAAGATTGAGTAGGAGGAATTTTGACACACAAATGGGGTATCTAACGACGTGGGTCAGCATTGCGCTAACGAATGAAGATATTTGCGTTAAAGGATTTGAAGGTGGAAGGGAAAAAATAGTGAATTTGCTAAGAAATGGAATGGTGAAAGTTGGTTATATTATGAGTAATGCACTTGCTTTGGTTAATAAATTGGTTGTCTCTATTTTTGAAATTGGACGGAGATTTGGAATTTCTCTTGAATTTGATGTGGAGATTGGATATTATAATGATGATGTTTTGGACAAGATAGGTTTCTTCTTTGTTGCATATGGAGATTGA MANPLLPSPFVFVSLLFLLSWLTHFAKVFEAAIDELHMSFGVLRRLSRRNFDTQMGYLTTWVSIALTNEDICVKGFEGGREKIVNLLRNGMVKVGYIMSNALALVNKLVVSIFEIGRRFGISLEFDVEIGYYNDDVLDKIGFFFVAYGD*
BLAST of Csa4G615740.1 vs. TrEMBL
Match: A0A0A0L1N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G615740 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 3.5e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TrEMBL
Match: A0A0A0KAX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397050 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 3.3e-28 Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TrEMBL
Match: I3SDE4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.1e-19 Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TrEMBL
Match: G7LBZ5_MEDTR (Plant invertase/pectin methylesterase inhibitor OS=Medicago truncatula GN=MTR_7g108790 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.1e-19 Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TrEMBL
Match: V7D1N5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G207300g PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.6e-19 Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TAIR10
Match: AT2G47670.1 (AT2G47670.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10 Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TAIR10
Match: AT3G62820.1 (AT3G62820.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TAIR10
Match: AT5G20740.1 (AT5G20740.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 57.4 bits (137), Expect = 8.9e-09 Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TAIR10
Match: AT5G62360.1 (AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 1
BLAST of Csa4G615740.1 vs. TAIR10
Match: AT1G62760.1 (AT1G62760.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 1
BLAST of Csa4G615740.1 vs. NCBI nr
Match: gi|700199796|gb|KGN54954.1| (hypothetical protein Csa_4G615740 [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 5.0e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G615740.1 vs. NCBI nr
Match: gi|659101359|ref|XP_008451567.1| (PREDICTED: 21 kDa protein [Cucumis melo]) HSP 1 Score: 133.7 bits (335), Expect = 2.8e-28 Identity = 68/88 (77.27%), Postives = 76/88 (86.36%), Query Frame = 1
BLAST of Csa4G615740.1 vs. NCBI nr
Match: gi|778728057|ref|XP_011659361.1| (PREDICTED: 21 kDa protein [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 4.7e-28 Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 1
BLAST of Csa4G615740.1 vs. NCBI nr
Match: gi|357511265|ref|XP_003625921.1| (plant invertase/pectin methylesterase inhibitor [Medicago truncatula]) HSP 1 Score: 103.6 bits (257), Expect = 3.1e-19 Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 1
BLAST of Csa4G615740.1 vs. NCBI nr
Match: gi|388500440|gb|AFK38286.1| (unknown [Lotus japonicus]) HSP 1 Score: 103.6 bits (257), Expect = 3.1e-19 Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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