Csa4G605530.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCCCTATCTCCCAATCTGATCCTATTGAATCTTCCAATCCTGTTCTCGAATCCTCACCAAATCCATCTGTTCCGACCTCTACTCTTTTCTTGCTATCCAACATCTGCAATCTTGTACCCATCCGACTGGACTCTATGAATTATGTTTTATGGAAATATCAAGTTTCCTCCTTCCTCAAAGCTCATTCCCTCTTTGGTCACATTGATGATTCCCTTCCCTGCCCTCCAAAAAAATTATCATCGTCGACAGCTGGAACTAATCCTGAAATCAACCCTGAATATCTCCAATGA ATGGCCACCCCTATCTCCCAATCTGATCCTATTGAATCTTCCAATCCTGTTCTCGAATCCTCACCAAATCCATCTGTTCCGACCTCTACTCTTTTCTTGCTATCCAACATCTGCAATCTTGTACCCATCCGACTGGACTCTATGAATTATGTTTTATGGAAATATCAAGTTTCCTCCTTCCTCAAAGCTCATTCCCTCTTTGGTCACATTGATGATTCCCTTCCCTGCCCTCCAAAAAAATTATCATCGTCGACAGCTGGAACTAATCCTGAAATCAACCCTGAATATCTCCAATGA ATGGCCACCCCTATCTCCCAATCTGATCCTATTGAATCTTCCAATCCTGTTCTCGAATCCTCACCAAATCCATCTGTTCCGACCTCTACTCTTTTCTTGCTATCCAACATCTGCAATCTTGTACCCATCCGACTGGACTCTATGAATTATGTTTTATGGAAATATCAAGTTTCCTCCTTCCTCAAAGCTCATTCCCTCTTTGGTCACATTGATGATTCCCTTCCCTGCCCTCCAAAAAAATTATCATCGTCGACAGCTGGAACTAATCCTGAAATCAACCCTGAATATCTCCAATGA MATPISQSDPIESSNPVLESSPNPSVPTSTLFLLSNICNLVPIRLDSMNYVLWKYQVSSFLKAHSLFGHIDDSLPCPPKKLSSSTAGTNPEINPEYLQ*
BLAST of Csa4G605530.1 vs. TrEMBL
Match: A0A0A0L1J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G605530 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 2.9e-49 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1
BLAST of Csa4G605530.1 vs. TrEMBL
Match: A0A0A0KMJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G272910 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.2e-24 Identity = 65/101 (64.36%), Postives = 71/101 (70.30%), Query Frame = 1
BLAST of Csa4G605530.1 vs. TrEMBL
Match: A0A0A0LSF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380600 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.2e-13 Identity = 48/99 (48.48%), Postives = 55/99 (55.56%), Query Frame = 1
BLAST of Csa4G605530.1 vs. TrEMBL
Match: M5W6W4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021461mg PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.0e-06 Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 1
BLAST of Csa4G605530.1 vs. TrEMBL
Match: A5BMU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010513 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.0e-06 Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 1
BLAST of Csa4G605530.1 vs. NCBI nr
Match: gi|700199766|gb|KGN54924.1| (hypothetical protein Csa_4G605530 [Cucumis sativus]) HSP 1 Score: 202.2 bits (513), Expect = 4.2e-49 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1
BLAST of Csa4G605530.1 vs. NCBI nr
Match: gi|700195641|gb|KGN50818.1| (hypothetical protein Csa_5G272910 [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23 Identity = 65/101 (64.36%), Postives = 71/101 (70.30%), Query Frame = 1
BLAST of Csa4G605530.1 vs. NCBI nr
Match: gi|659094339|ref|XP_008448007.1| (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X2 [Cucumis melo]) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-15 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
BLAST of Csa4G605530.1 vs. NCBI nr
Match: gi|659094337|ref|XP_008448006.1| (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X1 [Cucumis melo]) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-15 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
BLAST of Csa4G605530.1 vs. NCBI nr
Match: gi|659094341|ref|XP_008448008.1| (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X3 [Cucumis melo]) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-15 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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