Csa4G279790.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCTCCTCCTTCTCCTCCTTCTCCTCCTCGTCCTTGTTTATGATTCTCCTATTTATATCCCCTTCTCTGCTTTTACTATTCTGACTTCCTCCGCGTCTGGATCTCTCCCTTCTAGTTTTCATCCTCTTCCTCCTTCCCCTTCCTCTCTCATTTCCCTTCCTCATCAATTTCCATTTCCATGGCTGATCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGATGGCGATGGTCTGCTTCTCTTCTTTCAGATCCCCTTCTTCTTTCTCTTTTTAATGTTTTTTCGTTCCCCCATCCCCATTTTAGATCTATTTTCTTTCTCATGGAATTCCTATTTATCATTGCCCAGCCTACGATTATTATTTGTTTTTGTTTCGTGTTCCTGTCCTGGGTCTTCTTGATCCGTTTTTTTTTTTTTTTTTGTTCTATTGGATTGTCGATTACGATCAGCATTATGTGATTAGGAAGCTTGGTAATCGTGGATGGATGGATGGATATTGGATGCCATGTCCATGTCGATTTGAAATTTTTCTTAGGTTGTGTATTACAGTTTGGAATCTGGATAATGATGCATATTTACATAATTACATTTACATTTTAGTTCGTATATTAATACTCCCGCCTCGTCAGGCAGTAAATAACTCGTGGATCGTTGCTTTTCTGTATCTTTTGACTTTTGAGATGGTTTACGTAAGGAACGGGTCGTTTATGGTTTGCTTGTTTACCCTCCATATACATGTTACCATTTGATTGAATATCTTTAATAAGCATGCACGTCAGCATTAACATGGTAGACATGTCAATTAGTTAGGTAGAAGTTTGGAATTCATTTAGTTATCATATATCGTATGATCAGCAAATCTGGCAATTATCCTGGAATTTTATTTAGAATCATCTTATTTACACGACTTTTTCCTCTAATTTTATCGTCCGTCCTTCATTCTATGATAATTCAGCTGTTTGTTTTCAAAATAATTAAAGGCGTAATAAACAGGTTATTTCTAGAGAAAGCTGATATACAAACAACGCTAACCCATCATAACAATTTCTTCCTTTGAACTTGTTTAATGTTAAAGTTCGTCTAACGAATTCATAGCTGTACGAGTTGTTTAAGCAAGCAGTTGCAGCCTTCTAGTTTCTCTTGCTTCCTTATCTTGTGGGTTTGACTTGCTCTTTTGGTGTCTTTGTTGTTTTTTGTCTAGAAGTGTTTACTGTACGTAGAATCAGCGACTAAGACATCTGAAGTCCCCCATTGGGTTTAAAAATTATGAATTTGATCATGTTCCCTGCATACTATTTAGCAGATACTAATTGATTGTGCACATTCCATTGAGTGGAAATCTATCTCTAATGATGGCCTACTTATTTTGTTTATCTCCTTTTTCCAGTCTGAATTGTTAAGCATGGGTTAAATTAGATACATTCGTTGGTCTTTAAGAGAACTGAAGCTGTTTGGAACAGTTCACAATGAGCACAAGGATGTGTTCCCAACATTTTCAACTGTAGGAACATTGAGTGGAAAAACAATATTGGTCTTCTCCCACTAAGAAACCAAGGACGTTACCTGTAGGAGACAACCATGGAAGGATTTTTTTGGTACTCTACCCACCATCCAAGTGGGTCATTCCATATAAAATGTTGACTTTGCGGGGATTGTTTGACTTCCTGATAGCATTTAATCCAACCATGCTACTATTTTGAGATATGCTATTCCTAACAAGCACTCCTACTACATGCTGCTCAACCTAAAAAAGACTAACATGTATTGGTTTGTTTCTGTATGTCAAGCCTTACACTTATTTCGTGATTTGTATTTTGTTTGTTATATTTCTGTTGGGTAGGTTTGTTATATTCTTTTCTTGCAGTAGTTGATTTACTGGCTAATTATATGATCAACGTGTGTTTGAACCTTGCTTTTGTTTTGAATTGATTGCCTAGACCTGTTGGCATTTTATATTACTGGAAGTTTATACTTACTGCATGTTTCAGCCACACATGCAGTCGAACTTTATTCCATTCTCAGTTACTCCACTATCTTTGAAATTTCCATTTTTCTGAAACATATTCCTCTCAATTTTTGTTCTGAGTGTATGAAGCCTTGACGGGCTGGCAACTACTGGTCACTGCTTCTGCTTAGATAAATAATCAAATGGTGAGCCCATCCTATTGTTCTTTATTTAATAATGACTACCTTTCTTTTTCATTTTTTTATAGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGTTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTCCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAACTCAAGGAAGCTTTCCGCGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCACGTAATGACAAATCTAGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCTGACGTTGACGGTGATGGGCAAATCAACTATGAGGAATTTGTGAAAGTCATGATGGCCAAGTGAGAATCAAACTGAAACCTTATAAACCTTAATCTGCTTGAAAATGAAGAGGGATATGGGCAGATAAGTTGATGATATCATTTGTTTTCCCATTTAGGTTGTCTCCATTTTGTTTTACTATCTATGTTTGTCTCTCTCGTTTCCATTATTATTTGTGGTACTGTCTTTTCAGTATCCTGTTTCTTTGCTGCAACGATATCTGTAGTCTGGCATGGCTGTTCGTGTCGGTAGTCTCTCTAATTTTTCATATTTCTTTCTACCTGTGATGCTATGAACTCAGAAACCATTTGTTGATCGAATCAGAGGATTTTGCTTGTGGGAAGTTTTTTTTCTTTTTTTTTTT ATGGCTGATCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGATGGCGATGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGTTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTCCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAACTCAAGGAAGCTTTCCGCGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCACGTAATGACAAATCTAGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCTGACGTTGACGGTGATGGGCAAATCAACTATGAGGAATTTGTGAAAGTCATGATGGCCAAGTGA ATGGCTGATCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGATGGCGATGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGTTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTCCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAACTCAAGGAAGCTTTCCGCGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCACGTAATGACAAATCTAGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCTGACGTTGACGGTGATGGGCAAATCAACTATGAGGAATTTGTGAAAGTCATGATGGCCAAGTGA MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*
BLAST of Csa4G279790.1 vs. Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2) HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80 Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2) HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80 Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2) HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80 Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2) HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80 Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4) HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80 Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TrEMBL
Match: G3MHB1_9ACAR (Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TrEMBL
Match: Q6DN34_DAUCA (Calmodulin cam-202 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TrEMBL
Match: A0A061GVM0_THECC (Calmodulin 5 OS=Theobroma cacao GN=TCM_041153 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TrEMBL
Match: V7CY58_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G102700g PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TrEMBL
Match: R0GRM1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002202mg PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7) HSP 1 Score: 298.1 bits (762), Expect = 3.0e-81 Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5) HSP 1 Score: 297.0 bits (759), Expect = 6.7e-81 Identity = 148/149 (99.33%), Postives = 147/149 (98.66%), Query Frame = 1
HSP 2 Score: 68.6 bits (166), Expect = 3.9e-12 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3) HSP 1 Score: 297.0 bits (759), Expect = 6.7e-81 Identity = 148/149 (99.33%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6) HSP 1 Score: 296.6 bits (758), Expect = 8.7e-81 Identity = 148/149 (99.33%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Csa4G279790.1 vs. TAIR10
Match: AT2G41110.2 (AT2G41110.2 calmodulin 2) HSP 1 Score: 288.1 bits (736), Expect = 3.1e-78 Identity = 148/161 (91.93%), Postives = 147/161 (91.30%), Query Frame = 1
BLAST of Csa4G279790.1 vs. NCBI nr
Match: gi|985436881|ref|XP_015383199.1| (PREDICTED: calmodulin-related protein-like [Citrus sinensis]) HSP 1 Score: 298.1 bits (762), Expect = 8.5e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. NCBI nr
Match: gi|985436881|ref|XP_015383199.1| (PREDICTED: calmodulin-related protein-like [Citrus sinensis]) HSP 1 Score: 248.8 bits (634), Expect = 5.9e-63 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1
HSP 2 Score: 98.6 bits (244), Expect = 9.9e-18 Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 1
HSP 3 Score: 68.2 bits (165), Expect = 1.4e-08 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1
HSP 4 Score: 298.1 bits (762), Expect = 8.5e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. NCBI nr
Match: gi|672183350|ref|XP_008811949.1| (PREDICTED: calmodulin-7 isoform X1 [Phoenix dactylifera]) HSP 1 Score: 69.3 bits (168), Expect = 6.4e-09 Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1
HSP 2 Score: 298.1 bits (762), Expect = 8.5e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. NCBI nr
Match: gi|923610460|ref|XP_013744017.1| (PREDICTED: calmodulin-7-like [Brassica napus]) HSP 1 Score: 298.1 bits (762), Expect = 8.5e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa4G279790.1 vs. NCBI nr
Match: gi|296083945|emb|CBI24333.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 298.1 bits (762), Expect = 8.5e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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