Csa4G279790 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G279790
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Calmodulin; contains IPR011992 (EF-hand-like domain)
Location	Chr4 : 10741956 .. 10745357 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTCCTCCTTCTCCTCCTTCTCCTCCTCGTCCTTGTTTATGATTCTCCTATTTATATCCCCTTCTCTGCTTTTACTATTCTGACTTCCTCCGCGTCTGGATCTCTCCCTTCTAGTTTTCATCCTCTTCCTCCTTCCCCTTCCTCTCTCATTTCCCTTCCTCATCAATTTCCATTTCCATGGCTGATCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGATGGCGATGGTCTGCTTCTCTTCTTTCAGATCCCCTTCTTCTTTCTCTTTTTAATGTTTTTTCGTTCCCCCATCCCCATTTTAGATCTATTTTCTTTCTCATGGAATTCCTATTTATCATTGCCCAGCCTACGATTATTATTTGTTTTTGTTTCGTGTTCCTGTCCTGGGTCTTCTTGATCCGTTTTTTTTTTTTTTTTTGTTCTATTGGATTGTCGATTACGATCAGCATTATGTGATTAGGAAGCTTGGTAATCGTGGATGGATGGATGGATATTGGATGCCATGTCCATGTCGATTTGAAATTTTTCTTAGGTTGTGTATTACAGTTTGGAATCTGGATAATGATGCATATTTACATAATTACATTTACATTTTAGTTCGTATATTAATACTCCCGCCTCGTCAGGCAGTAAATAACTCGTGGATCGTTGCTTTTCTGTATCTTTTGACTTTTGAGATGGTTTACGTAAGGAACGGGTCGTTTATGGTTTGCTTGTTTACCCTCCATATACATGTTACCATTTGATTGAATATCTTTAATAAGCATGCACGTCAGCATTAACATGGTAGACATGTCAATTAGTTAGGTAGAAGTTTGGAATTCATTTAGTTATCATATATCGTATGATCAGCAAATCTGGCAATTATCCTGGAATTTTATTTAGAATCATCTTATTTACACGACTTTTTCCTCTAATTTTATCGTCCGTCCTTCATTCTATGATAATTCAGCTGTTTGTTTTCAAAATAATTAAAGGCGTAATAAACAGGTTATTTCTAGAGAAAGCTGATATACAAACAACGCTAACCCATCATAACAATTTCTTCCTTTGAACTTGTTTAATGTTAAAGTTCGTCTAACGAATTCATAGCTGTACGAGTTGTTTAAGCAAGCAGTTGCAGCCTTCTAGTTTCTCTTGCTTCCTTATCTTGTGGGTTTGACTTGCTCTTTTGGTGTCTTTGTTGTTTTTTGTCTAGAAGTGTTTACTGTACGTAGAATCAGCGACTAAGACATCTGAAGTCCCCCATTGGGTTTAAAAATTATGAATTTGATCATGTTCCCTGCATACTATTTAGCAGATACTAATTGATTGTGCACATTCCATTGAGTGGAAATCTATCTCTAATGATGGCCTACTTATTTTGTTTATCTCCTTTTTCCAGTCTGAATTGTTAAGCATGGGTTAAATTAGATACATTCGTTGGTCTTTAAGAGAACTGAAGCTGTTTGGAACAGTTCACAATGAGCACAAGGATGTGTTCCCAACATTTTCAACTGTAGGAACATTGAGTGGAAAAACAATATTGGTCTTCTCCCACTAAGAAACCAAGGACGTTACCTGTAGGAGACAACCATGGAAGGATTTTTTTGGTACTCTACCCACCATCCAAGTGGGTCATTCCATATAAAATGTTGACTTTGCGGGGATTGTTTGACTTCCTGATAGCATTTAATCCAACCATGCTACTATTTTGAGATATGCTATTCCTAACAAGCACTCCTACTACATGCTGCTCAACCTAAAAAAGACTAACATGTATTGGTTTGTTTCTGTATGTCAAGCCTTACACTTATTTCGTGATTTGTATTTTGTTTGTTATATTTCTGTTGGGTAGGTTTGTTATATTCTTTTCTTGCAGTAGTTGATTTACTGGCTAATTATATGATCAACGTGTGTTTGAACCTTGCTTTTGTTTTGAATTGATTGCCTAGACCTGTTGGCATTTTATATTACTGGAAGTTTATACTTACTGCATGTTTCAGCCACACATGCAGTCGAACTTTATTCCATTCTCAGTTACTCCACTATCTTTGAAATTTCCATTTTTCTGAAACATATTCCTCTCAATTTTTGTTCTGAGTGTATGAAGCCTTGACGGGCTGGCAACTACTGGTCACTGCTTCTGCTTAGATAAATAATCAAATGGTGAGCCCATCCTATTGTTCTTTATTTAATAATGACTACCTTTCTTTTTCATTTTTTTATAGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGTTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTCCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAACTCAAGGAAGCTTTCCGCGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCACGTAATGACAAATCTAGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCTGACGTTGACGGTGATGGGCAAATCAACTATGAGGAATTTGTGAAAGTCATGATGGCCAAGTGAGAATCAAACTGAAACCTTATAAACCTTAATCTGCTTGAAAATGAAGAGGGATATGGGCAGATAAGTTGATGATATCATTTGTTTTCCCATTTAGGTTGTCTCCATTTTGTTTTACTATCTATGTTTGTCTCTCTCGTTTCCATTATTATTTGTGGTACTGTCTTTTCAGTATCCTGTTTCTTTGCTGCAACGATATCTGTAGTCTGGCATGGCTGTTCGTGTCGGTAGTCTCTCTAATTTTTCATATTTCTTTCTACCTGTGATGCTATGAACTCAGAAACCATTTGTTGATCGAATCAGAGGATTTTGCTTGTGGGAAGTTTTTTTTCTTTTTTTTTTT

mRNA sequence

ATGGCTGATCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGATGGCGATGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGTTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTCCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAACTCAAGGAAGCTTTCCGCGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCACGTAATGACAAATCTAGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCTGACGTTGACGGTGATGGGCAAATCAACTATGAGGAATTTGTGAAAGTCATGATGGCCAAGTGA

Coding sequence (CDS)

ATGGCTGATCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGATGGCGATGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGTTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTCCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAACTCAAGGAAGCTTTCCGCGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCACGTAATGACAAATCTAGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCTGACGTTGACGGTGATGGGCAAATCAACTATGAGGAATTTGTGAAAGTCATGATGGCCAAGTGA

Protein sequence

MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*

Homology

[Close]

BLAST of Csa4G279790 vs. Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80
Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80
Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80
Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80
Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-80
Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TrEMBL
Match: G3MHB1_9ACAR (Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 28  MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 87

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 88  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 147

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 148 EVDEMIREADVDGDGQINYEEFVKVMMAK 176

[Close]

BLAST of Csa4G279790 vs. TrEMBL
Match: Q6DN34_DAUCA (Calmodulin cam-202 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TrEMBL
Match: A0A061GVM0_THECC (Calmodulin 5 OS=Theobroma cacao GN=TCM_041153 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TrEMBL
Match: V7CY58_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G102700g PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TrEMBL
Match: R0GRM1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002202mg PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 298.1 bits (762), Expect = 3.0e-81
Identity = 149/149 (100.00%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5)

HSP 1 Score: 297.0 bits (759), Expect = 6.7e-81
Identity = 148/149 (99.33%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 68.6 bits (166), Expect = 3.9e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1


Query: 1   MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
           MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D
Sbjct: 73  MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVD 132

Query: 61  GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 100
           G+G I++ EF+ +M  K +        + +     K++NG
Sbjct: 133 GDGQINYEEFVKVMMAKRRGKRVMAAKRSSNSAEYKEKNG 172

[Close]

BLAST of Csa4G279790 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 297.0 bits (759), Expect = 6.7e-81
Identity = 148/149 (99.33%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6)

HSP 1 Score: 296.6 bits (758), Expect = 8.7e-81
Identity = 148/149 (99.33%), Postives = 147/149 (98.66%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL+DE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. TAIR10
Match: AT2G41110.2 (AT2G41110.2 calmodulin 2)

HSP 1 Score: 288.1 bits (736), Expect = 3.1e-78
Identity = 148/161 (91.93%), Postives = 147/161 (91.30%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGD------------GCITTKELGTVMRSLGQNPTEAE 60
           MADQLTDDQISEFKEAFSLFDKDGD            GCITTKELGTVMRSLGQNPTEAE
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGMLHPPFPSIIVGCITTKELGTVMRSLGQNPTEAE 60

Query: 61  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 120
           LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH
Sbjct: 61  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 120

Query: 121 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 150
           VMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 VMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 161

[Close]

BLAST of Csa4G279790 vs. NCBI nr
Match: gi|985436881|ref|XP_015383199.1| (PREDICTED: calmodulin-related protein-like [Citrus sinensis])

HSP 1 Score: 298.1 bits (762), Expect = 8.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. NCBI nr
Match: gi|985436881|ref|XP_015383199.1| (PREDICTED: calmodulin-related protein-like [Citrus sinensis])

HSP 1 Score: 248.8 bits (634), Expect = 5.9e-63
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 26  GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 85
           GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE
Sbjct: 181 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 240

Query: 86  LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
           LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV
Sbjct: 241 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 300

Query: 146 MMAK 150
           MMAK
Sbjct: 301 MMAK 304

HSP 2 Score: 98.6 bits (244), Expect = 9.9e-18
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 1


Query: 1   MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
           MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D
Sbjct: 73  MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132

Query: 61  GNGTIDFPEFLNLMARKMKDT---------DSEEELKEAFRVFDKDQNGFISAAELRHVM 120
           G+G I++ EF+ +M  K ++          +   +    F +  +   G I+  EL  VM
Sbjct: 133 GDGQINYEEFVKVMMAKPEEACVVVVGVCINCMLKFHIVFVINYEFLTGCITTKELGTVM 192

Query: 121 TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 150
            +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct: 193 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 231

HSP 3 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1


Query: 1   MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
           MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D
Sbjct: 228 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 287

Query: 61  GNGTIDFPEFLNLMARKMK 79
           G+G I++ EF+ +M  K +
Sbjct: 288 GDGQINYEEFVKVMMAKRR 306

HSP 4 Score: 298.1 bits (762), Expect = 8.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. NCBI nr
Match: gi|672183350|ref|XP_008811949.1| (PREDICTED: calmodulin-7 isoform X1 [Phoenix dactylifera])

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-09
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1


Query: 1   MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
           MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D
Sbjct: 73  MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132

Query: 61  GNGTIDFPEFLNLMARKMKDTDSEEE 86
           G+G I++ EF+ +M  K +    +E+
Sbjct: 133 GDGQINYEEFVKVMMAKKRQKRIQEK 158

HSP 2 Score: 298.1 bits (762), Expect = 8.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. NCBI nr
Match: gi|923610460|ref|XP_013744017.1| (PREDICTED: calmodulin-7-like [Brassica napus])

HSP 1 Score: 298.1 bits (762), Expect = 8.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Csa4G279790 vs. NCBI nr
Match: gi|296083945|emb|CBI24333.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 298.1 bits (762), Expect = 8.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 150
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

The following BLAST results are available for this feature:

BLAST of Csa4G279790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CALM_BRYDI	5.3e-80	100.00	Calmodulin OS=Bryonia dioica PE=2 SV=2	[more]
CALM1_DAUCA	5.3e-80	100.00	Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2	[more]
CALM1_PETHY	5.3e-80	100.00	Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2	[more]
CALM7_ARATH	5.3e-80	100.00	Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2	[more]
CALM_EUPCH	5.3e-80	100.00	Calmodulin OS=Euphorbia characias PE=2 SV=4	[more]

BLAST of Csa4G279790 vs. TrEMBL


Match Name	E-value	Identity	Description
G3MHB1_9ACAR	5.9e-78	100.00	Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1	[more]
Q6DN34_DAUCA	5.9e-78	100.00	Calmodulin cam-202 OS=Daucus carota PE=2 SV=1	[more]
A0A061GVM0_THECC	5.9e-78	100.00	Calmodulin 5 OS=Theobroma cacao GN=TCM_041153 PE=4 SV=1	[more]
V7CY58_PHAVU	5.9e-78	100.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G102700g PE=4 SV=1	[more]
R0GRM1_9BRAS	5.9e-78	100.00	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002202mg PE=4 SV=1	[more]

BLAST of Csa4G279790 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43810.1	3.0e-81	100.00	calmodulin 7	[more]
AT2G27030.3	6.7e-81	99.33	calmodulin 5	[more]
AT3G56800.1	6.7e-81	99.33	calmodulin 3	[more]
AT5G21274.1	8.7e-81	99.33	calmodulin 6	[more]
AT2G41110.2	3.1e-78	91.93	calmodulin 2	[more]

BLAST of Csa4G279790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|985436881\|ref\|XP_015383199.1\|	8.5e-78	100.00	PREDICTED: calmodulin-related protein-like [Citrus sinensis]	[more]
gi\|985436881\|ref\|XP_015383199.1\|	5.9e-63	100.00	PREDICTED: calmodulin-related protein-like [Citrus sinensis]	[more]
gi\|672183350\|ref\|XP_008811949.1\|	6.4e-09	41.86	PREDICTED: calmodulin-7 isoform X1 [Phoenix dactylifera]	[more]
gi\|923610460\|ref\|XP_013744017.1\|	8.5e-78	100.00	PREDICTED: calmodulin-7-like [Brassica napus]	[more]
gi\|296083945\|emb\|CBI24333.3\|	8.5e-78	100.00	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0005513	detection of calcium ion
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0009612	response to mechanical stimulus
biological_process	GO:0008150	biological_process
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005964	phosphorylase kinase complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004689	phosphorylase kinase activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0005509	calcium ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU085087	cucumber EST collection version 3.0	transcribed_cluster
CU097750	cucumber EST collection version 3.0	transcribed_cluster
CU104496	cucumber EST collection version 3.0	transcribed_cluster
CU104961	cucumber EST collection version 3.0	transcribed_cluster
CU150741	cucumber EST collection version 3.0	transcribed_cluster
CU161373	cucumber EST collection version 3.0	transcribed_cluster
CU172066	cucumber EST collection version 3.0	transcribed_cluster
CU176707	cucumber EST collection version 3.0	transcribed_cluster
CU177380	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G279790.1	Csa4G279790.1	mRNA
Csa4G279790.2	Csa4G279790.2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU104961	CU104961	transcribed_cluster
CU177380	CU177380	transcribed_cluster
CU150741	CU150741	transcribed_cluster
CU104496	CU104496	transcribed_cluster
CU172066	CU172066	transcribed_cluster
CU085087	CU085087	transcribed_cluster
CU097750	CU097750	transcribed_cluster
CU176707	CU176707	transcribed_cluster
CU161373	CU161373	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 83..146 score: 7.4E-18coord: 12..73 score: 3.1
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 48..76 score: 2.5E-8coord: 12..40 score: 6.9E-8coord: 85..113 score: 3.1E-8coord: 121..149 score: 3.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 44..79 score: 14.541coord: 81..116 score: 17.554coord: 8..43 score: 16.661coord: 117..152 score: 14
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 3..68 score: 5.1E-42coord: 69..147 score: 1.2
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 2..147 score: 1.0
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 130..142 score: -coord: 94..106 score: -coord: 21..33 score: -coord: 57..69 scor
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..158 score: 2.1E
None	No IPR available	PANTHER	PTHR23050:SF153	CALMODULIN-1-RELATED	coord: 1..158 score: 2.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G279790	Cla003151	Watermelon (97103) v1	cuwmB347
Csa4G279790	MELO3C014698	Melon (DHL92) v3.5.1	cumeB295
Csa4G279790	ClCG02G024150	Watermelon (Charleston Gray)	cuwcgB292
Csa4G279790	Lsi10G009450	Bottle gourd (USVL1VR-Ls)	culsiB246
Csa4G279790	MELO3C014698.2	Melon (DHL92) v3.6.1	cumedB279
Csa4G279790	Cla97C02G050380	Watermelon (97103) v2	cuwmbB287
Csa4G279790	Bhi10G000365	Wax gourd	cuwgoB390
Csa4G279790	CSPI04G12810	Wild cucumber (PI 183967)	cpicuB181
Csa4G279790	Cucsa.153010	Cucumber (Gy14) v1	cgycuB220
Csa4G279790	CmaCh20G000220	Cucurbita maxima (Rimu)	cmacuB549
Csa4G279790	CmoCh20G000190	Cucurbita moschata (Rifu)	cmocuB538
Csa4G279790	Cp4.1LG16g09340	Cucurbita pepo (Zucchini)	cpecuB278
Csa4G279790	CsGy4G012360	Cucumber (Gy14) v2	cgybcuB167
Csa4G279790	Carg06957	Silver-seed gourd	carcuB0552
Csa4G279790	Carg02764	Silver-seed gourd	carcuB0935

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G279790	Cucurbita pepo (Zucchini)	cpecuB728
Csa4G279790	Cucurbita maxima (Rimu)	cmacuB605
Csa4G279790	Cucurbita moschata (Rifu)	cmocuB596