Csa3G734350.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G734350.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 28141677 .. 28142046 (-)
Sequence length228
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCTCAGCTGATTCCTTCCACGATCCTGTTCGTATCCGGCAATTGTTTCTCTATTCTCTTCGATTCTTCGCCTTGAACCACAAACTATGGAATGTATTCTTTTCTCGCGGACAAAAAAGAGATCTAAACCTTTATAATTGTTTAATGTACGGTGCAGTTTATTGATGGATGGATGATATTTGCAGAATATGCAAGGCCTAGAAGTCCCCCAGGATATTCATCTTACCATTCTGATAAATGATGCTTGTAAGGAGATTCAACTCATCCATCCGACTTGGTTGGTTCAGAATTTTGGAGACTGTCCAACAAAATGAAAATTTTTATCGTATGTTCTTCGTGATAAAGTTATGTTTGCTACATTTTG

mRNA sequence

ATGGAAACCTCAGCTGATTCCTTCCACGATCCTGTTCGTATCCGGCAATTGTTTCTCTATTCTCTTCGATTCTTCGCCTTGAACCACAAACTATGGAATAATATGCAAGGCCTAGAAGTCCCCCAGGATATTCATCTTACCATTCTGATAAATGATGCTTGTAAGGAGATTCAACTCATCCATCCGACTTGGTTGGTTCAGAATTTTGGAGACTGTCCAACAAAATGA

Coding sequence (CDS)

ATGGAAACCTCAGCTGATTCCTTCCACGATCCTGTTCGTATCCGGCAATTGTTTCTCTATTCTCTTCGATTCTTCGCCTTGAACCACAAACTATGGAATAATATGCAAGGCCTAGAAGTCCCCCAGGATATTCATCTTACCATTCTGATAAATGATGCTTGTAAGGAGATTCAACTCATCCATCCGACTTGGTTGGTTCAGAATTTTGGAGACTGTCCAACAAAATGA

Protein sequence

METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLIHPTWLVQNFGDCPTK*
Homology
[Close]
BLAST of Csa3G734350.1 vs. TrEMBL
Match: A0A0A0LDQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734350 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60
          METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI
Sbjct: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60

Query: 61 HPTWLVQNFGDCPTK 76
          HPTWLVQNFGDCPTK
Sbjct: 61 HPTWLVQNFGDCPTK 75

[Close]
BLAST of Csa3G734350.1 vs. NCBI nr
Match: gi|700203749|gb|KGN58882.1| (hypothetical protein Csa_3G734350 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60
          METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI
Sbjct: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60

Query: 61 HPTWLVQNFGDCPTK 76
          HPTWLVQNFGDCPTK
Sbjct: 61 HPTWLVQNFGDCPTK 75

The following BLAST results are available for this feature:
BLAST of Csa3G734350.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDQ9_CUCSA2.6e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734350 PE=4 SV=1[more]
BLAST of Csa3G734350.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203749|gb|KGN58882.1|3.7e-37100.00hypothetical protein Csa_3G734350 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G734350Csa3G734350gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G734350.1Csa3G734350.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G734350.1.utr3p1Csa3G734350.1.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G734350.1.cds2Csa3G734350.1.cds2CDS
Csa3G734350.1.cds1Csa3G734350.1.cds1CDS