Csa3G734350 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G734350
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 28141677 .. 28142046 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCTCAGCTGATTCCTTCCACGATCCTGTTCGTATCCGGCAATTGTTTCTCTATTCTCTTCGATTCTTCGCCTTGAACCACAAACTATGGAATGTATTCTTTTCTCGCGGACAAAAAAGAGATCTAAACCTTTATAATTGTTTAATGTACGGTGCAGTTTATTGATGGATGGATGATATTTGCAGAATATGCAAGGCCTAGAAGTCCCCCAGGATATTCATCTTACCATTCTGATAAATGATGCTTGTAAGGAGATTCAACTCATCCATCCGACTTGGTTGGTTCAGAATTTTGGAGACTGTCCAACAAAATGAAAATTTTTATCGTATGTTCTTCGTGATAAAGTTATGTTTGCTACATTTTG

mRNA sequence

ATGGAAACCTCAGCTGATTCCTTCCACGATCCTGTTCGTATCCGGCAATTGTTTCTCTATTCTCTTCGATTCTTCGCCTTGAACCACAAACTATGGAATAATATGCAAGGCCTAGAAGTCCCCCAGGATATTCATCTTACCATTCTGATAAATGATGCTTGTAAGGAGATTCAACTCATCCATCCGACTTGGTTGGTTCAGAATTTTGGAGACTGTCCAACAAAATGA

Coding sequence (CDS)

ATGGAAACCTCAGCTGATTCCTTCCACGATCCTGTTCGTATCCGGCAATTGTTTCTCTATTCTCTTCGATTCTTCGCCTTGAACCACAAACTATGGAATAATATGCAAGGCCTAGAAGTCCCCCAGGATATTCATCTTACCATTCTGATAAATGATGCTTGTAAGGAGATTCAACTCATCCATCCGACTTGGTTGGTTCAGAATTTTGGAGACTGTCCAACAAAATGA

Protein sequence

METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLIHPTWLVQNFGDCPTK*
Homology
[Close]
BLAST of Csa3G734350 vs. TrEMBL
Match: A0A0A0LDQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734350 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60
          METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI
Sbjct: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60

Query: 61 HPTWLVQNFGDCPTK 76
          HPTWLVQNFGDCPTK
Sbjct: 61 HPTWLVQNFGDCPTK 75

[Close]
BLAST of Csa3G734350 vs. NCBI nr
Match: gi|700203749|gb|KGN58882.1| (hypothetical protein Csa_3G734350 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60
          METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI
Sbjct: 1  METSADSFHDPVRIRQLFLYSLRFFALNHKLWNNMQGLEVPQDIHLTILINDACKEIQLI 60

Query: 61 HPTWLVQNFGDCPTK 76
          HPTWLVQNFGDCPTK
Sbjct: 61 HPTWLVQNFGDCPTK 75

The following BLAST results are available for this feature:
BLAST of Csa3G734350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDQ9_CUCSA2.6e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734350 PE=4 SV=1[more]
BLAST of Csa3G734350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203749|gb|KGN58882.1|3.7e-37100.00hypothetical protein Csa_3G734350 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G734350.1Csa3G734350.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G734350Silver-seed gourdcarcuB0175
Csa3G734350Silver-seed gourdcarcuB0332
Csa3G734350Silver-seed gourdcarcuB0362
Csa3G734350Silver-seed gourdcarcuB0502
Csa3G734350Silver-seed gourdcarcuB0946
Csa3G734350Silver-seed gourdcarcuB1011
Csa3G734350Watermelon (97103) v2cuwmbB187
Csa3G734350Watermelon (97103) v2cuwmbB195
Csa3G734350Watermelon (97103) v2cuwmbB202
Csa3G734350Watermelon (97103) v2cuwmbB245
Csa3G734350Wax gourdcuwgoB235
Csa3G734350Wax gourdcuwgoB323
Csa3G734350Cucumber (Chinese Long) v2cucuB092
Csa3G734350Cucumber (Chinese Long) v2cucuB101
Csa3G734350Cucumber (Chinese Long) v2cucuB116
Csa3G734350Cucumber (Gy14) v1cgycuB054
Csa3G734350Cucumber (Gy14) v1cgycuB268
Csa3G734350Cucurbita maxima (Rimu)cmacuB240
Csa3G734350Cucurbita maxima (Rimu)cmacuB547
Csa3G734350Cucurbita maxima (Rimu)cmacuB595
Csa3G734350Cucurbita maxima (Rimu)cmacuB657
Csa3G734350Cucurbita maxima (Rimu)cmacuB815
Csa3G734350Cucurbita maxima (Rimu)cmacuB856
Csa3G734350Cucurbita moschata (Rifu)cmocuB227
Csa3G734350Cucurbita moschata (Rifu)cmocuB536
Csa3G734350Cucurbita moschata (Rifu)cmocuB584
Csa3G734350Cucurbita moschata (Rifu)cmocuB645
Csa3G734350Cucurbita moschata (Rifu)cmocuB807
Csa3G734350Cucurbita moschata (Rifu)cmocuB843
Csa3G734350Melon (DHL92) v3.5.1cumeB224
Csa3G734350Melon (DHL92) v3.5.1cumeB259
Csa3G734350Watermelon (Charleston Gray)cuwcgB195
Csa3G734350Watermelon (Charleston Gray)cuwcgB212
Csa3G734350Watermelon (Charleston Gray)cuwcgB220
Csa3G734350Watermelon (Charleston Gray)cuwcgB259
Csa3G734350Watermelon (97103) v1cuwmB224
Csa3G734350Watermelon (97103) v1cuwmB199
Csa3G734350Watermelon (97103) v1cuwmB265
Csa3G734350Watermelon (97103) v1cuwmB267
Csa3G734350Cucurbita pepo (Zucchini)cpecuB068
Csa3G734350Cucurbita pepo (Zucchini)cpecuB276
Csa3G734350Cucurbita pepo (Zucchini)cpecuB480
Csa3G734350Cucurbita pepo (Zucchini)cpecuB598
Csa3G734350Cucurbita pepo (Zucchini)cpecuB726
Csa3G734350Cucurbita pepo (Zucchini)cpecuB860
Csa3G734350Bottle gourd (USVL1VR-Ls)culsiB161
Csa3G734350Bottle gourd (USVL1VR-Ls)culsiB168
Csa3G734350Bottle gourd (USVL1VR-Ls)culsiB187
Csa3G734350Bottle gourd (USVL1VR-Ls)culsiB196
Csa3G734350Cucumber (Gy14) v2cgybcuB111
Csa3G734350Cucumber (Gy14) v2cgybcuB162
Csa3G734350Cucumber (Gy14) v2cgybcuB212
Csa3G734350Cucumber (Gy14) v2cgybcuB262
Csa3G734350Melon (DHL92) v3.6.1cumedB164
Csa3G734350Melon (DHL92) v3.6.1cumedB168
Csa3G734350Melon (DHL92) v3.6.1cumedB209
Csa3G734350Melon (DHL92) v3.6.1cumedB249