Csa3G232970.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G232970.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15111058 .. 15111554 (-)
Sequence length240
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCCCTTGATGAGAAAGACATCTATAAGAGCCAACATGAACAGATTGGAGTTTTCACATCAAATACTTTATAAATAATATTCTTTTTCAATTGATAACAAACAAGCACCATTTTCATATATATATATATATTTTAATCATCCATTATTGTCTATTTGAAGCTTAAATAAATTTCAATTTCTTCCTAACAAACCCTAGTTTCATCTTGTGGTGTAATTAATACCTCGTCAAAACTAAAACAAAAAAAAATCATGAGTTGACTTCAATGAAAACCAAAGAAGAATATTCAAACCTTAGATAAGTTCAGGGTGGAGCGAACGATGGAGAAATTGCAAGACGGAGGCAGAGACTGAGAAGGAGGAAAACAGCGGAGAGGCTGGCTGAAGGAGAGGCGAATGATGGAGAGGAGGTGAATGTCGAAGAGCTTGTTGAAGGAGACGGTTGCATGCGAAGCGAAGAGGTTGAAGGAGAGGTGCGTGAGAAGTGGAGCTGA

mRNA sequence

ATGGCAGCCCTTGATGAGAAAGACATCTATAAGAGCCAACATGAACAGATTGGAGGTGGAGCGAACGATGGAGAAATTGCAAGACGGAGGCAGAGACTGAGAAGGAGGAAAACAGCGGAGAGGCTGGCTGAAGGAGAGGCGAATGATGGAGAGGAGGTGAATGTCGAAGAGCTTGTTGAAGGAGACGGTTGCATGCGAAGCGAAGAGGTTGAAGGAGAGGTGCGTGAGAAGTGGAGCTGA

Coding sequence (CDS)

ATGGCAGCCCTTGATGAGAAAGACATCTATAAGAGCCAACATGAACAGATTGGAGGTGGAGCGAACGATGGAGAAATTGCAAGACGGAGGCAGAGACTGAGAAGGAGGAAAACAGCGGAGAGGCTGGCTGAAGGAGAGGCGAATGATGGAGAGGAGGTGAATGTCGAAGAGCTTGTTGAAGGAGACGGTTGCATGCGAAGCGAAGAGGTTGAAGGAGAGGTGCGTGAGAAGTGGAGCTGA

Protein sequence

MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVEGDGCMRSEEVEGEVREKWS*
Homology
[Close]
BLAST of Csa3G232970.1 vs. TrEMBL
Match: A0A0A0L6N0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G232970 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 7.8e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVE 60
          MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVE
Sbjct: 1  MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVE 60

Query: 61 GDGCMRSEEVEGEVREKWS 80
          GDGCMRSEEVEGEVREKWS
Sbjct: 61 GDGCMRSEEVEGEVREKWS 79

[Close]
BLAST of Csa3G232970.1 vs. NCBI nr
Match: gi|700202492|gb|KGN57625.1| (hypothetical protein Csa_3G232970 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVE 60
          MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVE
Sbjct: 1  MAALDEKDIYKSQHEQIGGGANDGEIARRRQRLRRRKTAERLAEGEANDGEEVNVEELVE 60

Query: 61 GDGCMRSEEVEGEVREKWS 80
          GDGCMRSEEVEGEVREKWS
Sbjct: 61 GDGCMRSEEVEGEVREKWS 79

The following BLAST results are available for this feature:
BLAST of Csa3G232970.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6N0_CUCSA7.8e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G232970 PE=4 SV=1[more]
BLAST of Csa3G232970.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202492|gb|KGN57625.1|1.1e-36100.00hypothetical protein Csa_3G232970 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G232970Csa3G232970gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G232970.1Csa3G232970.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G232970.1.cds2Csa3G232970.1.cds2CDS
Csa3G232970.1.cds1Csa3G232970.1.cds1CDS