Csa2G336070.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGAGGAAAACTGAGCATGAAACTCATAAGTAATGAGAAATCTCGAAAGACTACTTTTCATAAGCGGAAAGCAAGTTTGTTGCGAAAAGCTTACGAGCTTTCCACATTGTGTGATGTTCGTGTTTGTGTGGTTGTTCATGGCCCTAACCAATCAAATGACCAATCTCCACTCCAACTTCACACATGGCCGCCCTCTGCTGATGAAGTCAATAACATGATTGCTTCTTACAAAACTAATTGTCTCTACAAACGTGTTCGCAAGTCATTCGGTCTTATCGATTTCTTCTCCGAAAGAAAGAAGAAGGTCGAAACTGATATGTCCAAGCTTCGTAAGGATGTTTCTGAAGAAAGGTAATTATAATTATAGTTAAATATGCATGTTTGGATTTACTATTTGTTTATAGTTTAACAATCTTTGTGTGAGTTAATTTGTTATTATATTATGAATGTTGATTAGGTTTCCAAGTTGGGATGAACGTCTAGATCATCTCTTAGAAGATCAATTACGAGTTTTAATGGTGGAATTGGATTCAAAGATCGAGATAGCGAAGAAAAGGATTGAGATAGCAACGGAGAATAATTATAATGTTGAGGAGGGGACGTCAGTGGAGAGTAGCGGCCAAACCCTAAATGCAAACATGAAGTGTAAACAAGTAATGGGATTTGATCATGAAGAGGAAAGTACTGATTATGGGATGTTTGGAATTAGGTCATCAATGGAGCAAACACAAGGCATAATGCCATTCCATCATCATCATCATCATCATCATCAACAACAACAACTTCAAACAATGGCACAAAGCTGTCTTCAAATGGATCATGAGATTGAGAATTTGTCTCCATTCCTATTTGGATCTAATGGGTCAGCACCACAATTTCAGTTAAGTTATGGAAGTAATACTAACAATTGTTTCCAAAACTACCCTCATAGTTTTTACAATGATCCAACAAATGGGATGATTATGGAGAACACACAAAGCTACTCATCAATGTGCCATTATGGAGTTCCATTTGGTGCACAATCAGTTGTTCCAATATCATATATGCAAATGCAACAACTCACTGCCGGCGCTGAGGATCAGATGATGATGGGTTATGCTTCAACCTCTCAAATGGCTTTGCCCAATACTGCTTCTTCTCAAGTGATCAATGATCCATTTGATTTCTACAATAGCTATGAGTATTTGATGAAGCCTAACAACTTCTAA ATGGGGAGAGGAAAACTGAGCATGAAACTCATAAGTAATGAGAAATCTCGAAAGACTACTTTTCATAAGCGGAAAGCAAGTTTGTTGCGAAAAGCTTACGAGCTTTCCACATTGTGTGATGTTCGTGTTTGTGTGGTTGTTCATGGCCCTAACCAATCAAATGACCAATCTCCACTCCAACTTCACACATGGCCGCCCTCTGCTGATGAAGTCAATAACATGATTGCTTCTTACAAAACTAATTGTCTCTACAAACGTGTTCGCAAGTCATTCGGTCTTATCGATTTCTTCTCCGAAAGAAAGAAGAAGGTCGAAACTGATATGTCCAAGCTTCGTAAGGATGTTTCTGAAGAAAGGTTTCCAAGTTGGGATGAACGTCTAGATCATCTCTTAGAAGATCAATTACGAGTTTTAATGGTGGAATTGGATTCAAAGATCGAGATAGCGAAGAAAAGGATTGAGATAGCAACGGAGAATAATTATAATGTTGAGGAGGGGACGTCAGTGGAGAGTAGCGGCCAAACCCTAAATGCAAACATGAAGTGTAAACAAGTAATGGGATTTGATCATGAAGAGGAAAGTACTGATTATGGGATGTTTGGAATTAGGTCATCAATGGAGCAAACACAAGGCATAATGCCATTCCATCATCATCATCATCATCATCATCAACAACAACAACTTCAAACAATGGCACAAAGCTGTCTTCAAATGGATCATGAGATTGAGAATTTGTCTCCATTCCTATTTGGATCTAATGGGTCAGCACCACAATTTCAGTTAAGTTATGGAAGTAATACTAACAATTGTTTCCAAAACTACCCTCATAGTTTTTACAATGATCCAACAAATGGGATGATTATGGAGAACACACAAAGCTACTCATCAATGTGCCATTATGGAGTTCCATTTGGTGCACAATCAGTTGTTCCAATATCATATATGCAAATGCAACAACTCACTGCCGGCGCTGAGGATCAGATGATGATGGGTTATGCTTCAACCTCTCAAATGGCTTTGCCCAATACTGCTTCTTCTCAAGTGATCAATGATCCATTTGATTTCTACAATAGCTATGAGTATTTGATGAAGCCTAACAACTTCTAA ATGGGGAGAGGAAAACTGAGCATGAAACTCATAAGTAATGAGAAATCTCGAAAGACTACTTTTCATAAGCGGAAAGCAAGTTTGTTGCGAAAAGCTTACGAGCTTTCCACATTGTGTGATGTTCGTGTTTGTGTGGTTGTTCATGGCCCTAACCAATCAAATGACCAATCTCCACTCCAACTTCACACATGGCCGCCCTCTGCTGATGAAGTCAATAACATGATTGCTTCTTACAAAACTAATTGTCTCTACAAACGTGTTCGCAAGTCATTCGGTCTTATCGATTTCTTCTCCGAAAGAAAGAAGAAGGTCGAAACTGATATGTCCAAGCTTCGTAAGGATGTTTCTGAAGAAAGGTTTCCAAGTTGGGATGAACGTCTAGATCATCTCTTAGAAGATCAATTACGAGTTTTAATGGTGGAATTGGATTCAAAGATCGAGATAGCGAAGAAAAGGATTGAGATAGCAACGGAGAATAATTATAATGTTGAGGAGGGGACGTCAGTGGAGAGTAGCGGCCAAACCCTAAATGCAAACATGAAGTGTAAACAAGTAATGGGATTTGATCATGAAGAGGAAAGTACTGATTATGGGATGTTTGGAATTAGGTCATCAATGGAGCAAACACAAGGCATAATGCCATTCCATCATCATCATCATCATCATCATCAACAACAACAACTTCAAACAATGGCACAAAGCTGTCTTCAAATGGATCATGAGATTGAGAATTTGTCTCCATTCCTATTTGGATCTAATGGGTCAGCACCACAATTTCAGTTAAGTTATGGAAGTAATACTAACAATTGTTTCCAAAACTACCCTCATAGTTTTTACAATGATCCAACAAATGGGATGATTATGGAGAACACACAAAGCTACTCATCAATGTGCCATTATGGAGTTCCATTTGGTGCACAATCAGTTGTTCCAATATCATATATGCAAATGCAACAACTCACTGCCGGCGCTGAGGATCAGATGATGATGGGTTATGCTTCAACCTCTCAAATGGCTTTGCCCAATACTGCTTCTTCTCAAGTGATCAATGATCCATTTGATTTCTACAATAGCTATGAGTATTTGATGAAGCCTAACAACTTCTAA MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHGPNQSNDQSPLQLHTWPPSADEVNNMIASYKTNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDVSEERFPSWDERLDHLLEDQLRVLMVELDSKIEIAKKRIEIATENNYNVEEGTSVESSGQTLNANMKCKQVMGFDHEEESTDYGMFGIRSSMEQTQGIMPFHHHHHHHHQQQQLQTMAQSCLQMDHEIENLSPFLFGSNGSAPQFQLSYGSNTNNCFQNYPHSFYNDPTNGMIMENTQSYSSMCHYGVPFGAQSVVPISYMQMQQLTAGAEDQMMMGYASTSQMALPNTASSQVINDPFDFYNSYEYLMKPNNF*
BLAST of Csa2G336070.1 vs. Swiss-Prot
Match: AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana GN=AGL82 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16 Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 1
BLAST of Csa2G336070.1 vs. Swiss-Prot
Match: AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.9e-12 Identity = 51/187 (27.27%), Postives = 82/187 (43.85%), Query Frame = 1
BLAST of Csa2G336070.1 vs. Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.8e-11 Identity = 57/231 (24.68%), Postives = 107/231 (46.32%), Query Frame = 1
BLAST of Csa2G336070.1 vs. Swiss-Prot
Match: AG103_ARATH (Agamous-like MADS-box protein AGL103 OS=Arabidopsis thaliana GN=AGL103 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.9e-10 Identity = 44/135 (32.59%), Postives = 67/135 (49.63%), Query Frame = 1
BLAST of Csa2G336070.1 vs. Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.9e-10 Identity = 57/237 (24.05%), Postives = 101/237 (42.62%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TrEMBL
Match: A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336070 PE=4 SV=1) HSP 1 Score: 757.7 bits (1955), Expect = 6.7e-216 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TrEMBL
Match: M5XI05_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027181mg PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 6.8e-35 Identity = 69/153 (45.10%), Postives = 110/153 (71.90%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TrEMBL
Match: M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021970mg PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 67/153 (43.79%), Postives = 109/153 (71.24%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TrEMBL
Match: B9GRC0_POPTR (MADS-box family protein OS=Populus trichocarpa GN=POPTR_0002s25700g PE=4 SV=2) HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31 Identity = 66/161 (40.99%), Postives = 110/161 (68.32%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TrEMBL
Match: B9I424_POPTR (MADS-box family protein OS=Populus trichocarpa GN=POPTR_0012s11170g PE=4 SV=2) HSP 1 Score: 144.1 bits (362), Expect = 3.5e-31 Identity = 67/161 (41.61%), Postives = 108/161 (67.08%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TAIR10
Match: AT5G55690.1 (AT5G55690.1 MADS-box transcription factor family protein) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-19 Identity = 49/152 (32.24%), Postives = 82/152 (53.95%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TAIR10
Match: AT5G58890.1 (AT5G58890.1 AGAMOUS-like 82) HSP 1 Score: 88.6 bits (218), Expect = 8.8e-18 Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TAIR10
Match: AT5G26630.1 (AT5G26630.1 MADS-box transcription factor family protein) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14 Identity = 51/167 (30.54%), Postives = 77/167 (46.11%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TAIR10
Match: AT5G48670.1 (AT5G48670.1 AGAMOUS-like 80) HSP 1 Score: 72.8 bits (177), Expect = 5.0e-13 Identity = 51/187 (27.27%), Postives = 82/187 (43.85%), Query Frame = 1
BLAST of Csa2G336070.1 vs. TAIR10
Match: AT4G11250.1 (AT4G11250.1 AGAMOUS-like 52) HSP 1 Score: 68.6 bits (166), Expect = 9.5e-12 Identity = 42/144 (29.17%), Postives = 65/144 (45.14%), Query Frame = 1
BLAST of Csa2G336070.1 vs. NCBI nr
Match: gi|778674258|ref|XP_011650173.1| (PREDICTED: floral homeotic protein DEFICIENS-like [Cucumis sativus]) HSP 1 Score: 757.7 bits (1955), Expect = 9.6e-216 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
BLAST of Csa2G336070.1 vs. NCBI nr
Match: gi|659121915|ref|XP_008460878.1| (PREDICTED: MADS-box protein SOC1-like [Cucumis melo]) HSP 1 Score: 649.0 bits (1673), Expect = 4.8e-183 Identity = 330/371 (88.95%), Postives = 341/371 (91.91%), Query Frame = 1
BLAST of Csa2G336070.1 vs. NCBI nr
Match: gi|645246354|ref|XP_008229316.1| (PREDICTED: MADS-box transcription factor 1-like [Prunus mume]) HSP 1 Score: 174.1 bits (440), Expect = 4.5e-40 Identity = 114/387 (29.46%), Postives = 192/387 (49.61%), Query Frame = 1
BLAST of Csa2G336070.1 vs. NCBI nr
Match: gi|595970108|ref|XP_007217491.1| (hypothetical protein PRUPE_ppa027181mg, partial [Prunus persica]) HSP 1 Score: 156.4 bits (394), Expect = 9.8e-35 Identity = 69/153 (45.10%), Postives = 110/153 (71.90%), Query Frame = 1
BLAST of Csa2G336070.1 vs. NCBI nr
Match: gi|694327228|ref|XP_009354489.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Pyrus x bretschneideri]) HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33 Identity = 71/153 (46.41%), Postives = 110/153 (71.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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