Csa2G249840.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G249840.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 12215893 .. 12216054 (+)
Sequence length162
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCAAGTCATTGCATGGAGGACCCTCACCTATTGGTAGAGGTGGGCGAGATGGACATGCAAGTGCCTCAACTTTGAGGGAGGTCGAACAGAACATAGCGCCTATAAAGAAGGTTGTGGAACGCAACACAAATCCAGAGACACCAATATGCCCCTAA

mRNA sequence

ATGGAGACCAAGTCATTGCATGGAGGACCCTCACCTATTGGTAGAGGTGGGCGAGATGGACATGCAAGTGCCTCAACTTTGAGGGAGGTCGAACAGAACATAGCGCCTATAAAGAAGGTTGTGGAACGCAACACAAATCCAGAGACACCAATATGCCCCTAA

Coding sequence (CDS)

ATGGAGACCAAGTCATTGCATGGAGGACCCTCACCTATTGGTAGAGGTGGGCGAGATGGACATGCAAGTGCCTCAACTTTGAGGGAGGTCGAACAGAACATAGCGCCTATAAAGAAGGTTGTGGAACGCAACACAAATCCAGAGACACCAATATGCCCCTAA

Protein sequence

METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP*
Homology
[Close]
BLAST of Csa2G249840.1 vs. TrEMBL
Match: A0A0A0LL88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G249840 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 54
          METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP
Sbjct: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 53

[Close]
BLAST of Csa2G249840.1 vs. NCBI nr
Match: gi|700206710|gb|KGN61829.1| (hypothetical protein Csa_2G249840 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 54
          METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP
Sbjct: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 53

The following BLAST results are available for this feature:
BLAST of Csa2G249840.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL88_CUCSA1.3e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G249840 PE=4 SV=1[more]
BLAST of Csa2G249840.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206710|gb|KGN61829.1|1.8e-22100.00hypothetical protein Csa_2G249840 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G249840Csa2G249840gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G249840.1Csa2G249840.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G249840.1.cds1Csa2G249840.1.cds1CDS