Csa2G249840 (gene) Cucumber (Chinese Long) v2

NameCsa2G249840
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 12215893 .. 12216054 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCAAGTCATTGCATGGAGGACCCTCACCTATTGGTAGAGGTGGGCGAGATGGACATGCAAGTGCCTCAACTTTGAGGGAGGTCGAACAGAACATAGCGCCTATAAAGAAGGTTGTGGAACGCAACACAAATCCAGAGACACCAATATGCCCCTAA

mRNA sequence

ATGGAGACCAAGTCATTGCATGGAGGACCCTCACCTATTGGTAGAGGTGGGCGAGATGGACATGCAAGTGCCTCAACTTTGAGGGAGGTCGAACAGAACATAGCGCCTATAAAGAAGGTTGTGGAACGCAACACAAATCCAGAGACACCAATATGCCCCTAA

Coding sequence (CDS)

ATGGAGACCAAGTCATTGCATGGAGGACCCTCACCTATTGGTAGAGGTGGGCGAGATGGACATGCAAGTGCCTCAACTTTGAGGGAGGTCGAACAGAACATAGCGCCTATAAAGAAGGTTGTGGAACGCAACACAAATCCAGAGACACCAATATGCCCCTAA

Protein sequence

METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP*
BLAST of Csa2G249840 vs. TrEMBL
Match: A0A0A0LL88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G249840 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 54
          METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP
Sbjct: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 53

BLAST of Csa2G249840 vs. NCBI nr
Match: gi|700206710|gb|KGN61829.1| (hypothetical protein Csa_2G249840 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 54
          METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP
Sbjct: 1  METKSLHGGPSPIGRGGRDGHASASTLREVEQNIAPIKKVVERNTNPETPICP 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LL88_CUCSA1.3e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G249840 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206710|gb|KGN61829.1|1.8e-22100.00hypothetical protein Csa_2G249840 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU154468cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G249840.1Csa2G249840.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU154468CU154468transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G249840CsGy2G012540Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None