Csa2G123580.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGATACTATGATTAAGAAATCCCATAATCACGGCTCTTTTCTCATTCCACCAGAGGTTTTCCCTCTTTTCTCTTCCCCTAAAAAGCCAAAAAGAGAGAAACATACAGAAAGAGAGAGGATGATGGAAGGGGTCCATCGTCGTCCAAACAAGGGCGATCGGAACCTCAGAATCATAGACGTGAGAAAACTAAGCGAAAACAAGATACACCTAAACCAATCAGGTCGTCAATCTACCATGAATCCATCATCAGTGAAACCACGTGGGATGAAGACAGCATCAGAATCCTCGAAAACATCAGGTGGAAAGTCATGGGGGAAGAAATTAGAAGTGAAAAGGCGACGACGCGTTGCAAAGTACAAGTTGTATACAGTGGAAGGGAAGGTCAAAGATTCCATAAGAAAAGGGATAAATTGGTTCAAATGCAAGTATACAAGAATCATGTCTGGATTTTGAATTTTAAATTTTCTCTTCTTTTTTTCAATTTTTGTAAGAAAACAAACTTCAACTTTCATGTCCTTTTCTTCATCTTCTTTTTCAGTGCAATGATAACATTGTCAACTTTCATG ATGATTAAGAAATCCCATAATCACGGCTCTTTTCTCATTCCACCAGAGGTTTTCCCTCTTTTCTCTTCCCCTAAAAAGCCAAAAAGAGAGAAACATACAGAAAGAGAGAGGATGATGGAAGGGGTCCATCGTCGTCCAAACAAGGGCGATCGGAACCTCAGAATCATAGACGTGAGAAAACTAAGCGAAAACAAGATACACCTAAACCAATCAGGTCGTCAATCTACCATGAATCCATCATCAGTGAAACCACGTGGGATGAAGACAGCATCAGAATCCTCGAAAACATCAGGTGGAAAGTCATGGGGGAAGAAATTAGAAGTGAAAAGGCGACGACGCGTTGCAAAGTACAAGTTGTATACAGTGGAAGGGAAGGTCAAAGATTCCATAAGAAAAGGGATAAATTGGTTCAAATGCAAGTATACAAGAATCATGTCTGGATTTTGA ATGATTAAGAAATCCCATAATCACGGCTCTTTTCTCATTCCACCAGAGGTTTTCCCTCTTTTCTCTTCCCCTAAAAAGCCAAAAAGAGAGAAACATACAGAAAGAGAGAGGATGATGGAAGGGGTCCATCGTCGTCCAAACAAGGGCGATCGGAACCTCAGAATCATAGACGTGAGAAAACTAAGCGAAAACAAGATACACCTAAACCAATCAGGTCGTCAATCTACCATGAATCCATCATCAGTGAAACCACGTGGGATGAAGACAGCATCAGAATCCTCGAAAACATCAGGTGGAAAGTCATGGGGGAAGAAATTAGAAGTGAAAAGGCGACGACGCGTTGCAAAGTACAAGTTGTATACAGTGGAAGGGAAGGTCAAAGATTCCATAAGAAAAGGGATAAATTGGTTCAAATGCAAGTATACAAGAATCATGTCTGGATTTTGA MIKKSHNHGSFLIPPEVFPLFSSPKKPKREKHTERERMMEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSGGKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF*
BLAST of Csa2G123580.1 vs. TrEMBL
Match: A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 8.2e-80 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 9.5e-28 Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TrEMBL
Match: A0A061F3Z2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11 Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TrEMBL
Match: M1D4L6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031801 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-10 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TrEMBL
Match: K4CVE2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-10 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511)) HSP 1 Score: 62.4 bits (150), Expect = 2.7e-10 Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511)) HSP 1 Score: 57.8 bits (138), Expect = 6.8e-09 Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 56.2 bits (134), Expect = 2.0e-08 Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511)) HSP 1 Score: 52.8 bits (125), Expect = 2.2e-07 Identity = 20/41 (48.78%), Postives = 29/41 (70.73%), Query Frame = 1
BLAST of Csa2G123580.1 vs. TAIR10
Match: AT3G13910.1 (AT3G13910.1 Protein of unknown function (DUF3511)) HSP 1 Score: 51.6 bits (122), Expect = 4.8e-07 Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of Csa2G123580.1 vs. NCBI nr
Match: gi|700206328|gb|KGN61447.1| (hypothetical protein Csa_2G123580 [Cucumis sativus]) HSP 1 Score: 304.3 bits (778), Expect = 1.2e-79 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of Csa2G123580.1 vs. NCBI nr
Match: gi|659082109|ref|XP_008441676.1| (PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo]) HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41 Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 1
BLAST of Csa2G123580.1 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27 Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of Csa2G123580.1 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 7.5e-26 Identity = 65/110 (59.09%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Csa2G123580.1 vs. NCBI nr
Match: gi|590644563|ref|XP_007031116.1| (Uncharacterized protein TCM_026743 [Theobroma cacao]) HSP 1 Score: 77.8 bits (190), Expect = 1.8e-11 Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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