Csa2G123040.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATACAATTACAAAAATAAAATAAAAATAAAAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAAGGAAATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAAAATTTGTAAGGGCTTATTCTTCCAAACTTAAGATTAATGGATGTGTACAGCATAATTATTATTCATCTTCAAACCATACTTGATGTTGATACTCTTCAAAGCTTCTGCTTTAATTCAAATTTTGTGCTTTTCTTTTTGGTTGTTGTTATGTATTGCAAAGTTGGTCAAATGGAGATTGGTGGACAAAGTTATGTTATTTGACTTCTTGTGATTCATGAGCTGTAATGAGAAATAATCAAATAAATCAACAACCCATTACTCTACTTTTGT ATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAA ATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAA MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH*
BLAST of Csa2G123040.1 vs. TrEMBL
Match: A0A0A0LL24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.4e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Csa2G123040.1 vs. TrEMBL
Match: B9T533_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211550 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-09 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 1
BLAST of Csa2G123040.1 vs. TrEMBL
Match: V4TZC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022922mg PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.9e-09 Identity = 49/125 (39.20%), Postives = 63/125 (50.40%), Query Frame = 1
BLAST of Csa2G123040.1 vs. TrEMBL
Match: A0A061EPK1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021536 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-09 Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 1
BLAST of Csa2G123040.1 vs. TrEMBL
Match: R0HT61_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024778mg PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.1e-08 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 1
BLAST of Csa2G123040.1 vs. TAIR10
Match: AT2G44010.1 (AT2G44010.1 unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 3.5e-10 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1
BLAST of Csa2G123040.1 vs. TAIR10
Match: AT3G59880.1 (AT3G59880.1 unknown protein) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08 Identity = 38/125 (30.40%), Postives = 67/125 (53.60%), Query Frame = 1
BLAST of Csa2G123040.1 vs. NCBI nr
Match: gi|449442349|ref|XP_004138944.1| (PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus]) HSP 1 Score: 223.4 bits (568), Expect = 2.0e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Csa2G123040.1 vs. NCBI nr
Match: gi|659082088|ref|XP_008441665.1| (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 6.5e-51 Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 1
BLAST of Csa2G123040.1 vs. NCBI nr
Match: gi|255585307|ref|XP_002533352.1| (PREDICTED: uncharacterized protein LOC8261699 [Ricinus communis]) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-09 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 1
BLAST of Csa2G123040.1 vs. NCBI nr
Match: gi|567899076|ref|XP_006442026.1| (hypothetical protein CICLE_v10022922mg [Citrus clementina]) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-09 Identity = 49/125 (39.20%), Postives = 63/125 (50.40%), Query Frame = 1
BLAST of Csa2G123040.1 vs. NCBI nr
Match: gi|590627599|ref|XP_007026483.1| (Uncharacterized protein TCM_021536 [Theobroma cacao]) HSP 1 Score: 68.9 bits (167), Expect = 6.2e-09 Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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