Csa2G075390.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G075390.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6171029 .. 6171340 (+)
Sequence length258
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGAAGTGGGTATTGCTTTGTTCATCAAGTGAATGGGAGTTTCTTGCTTGGGATTTCGTTCTTTGGGGCTTTCAAGCTCTGTGTTTACTTTATTAATAAATGGGTTTTCATTCTGTTTATTGTTTCTTCTGCAGATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGA

mRNA sequence

ATGGAATTGAAGTGGGTATTGCTTTGTTCATCAAGTGAATGGGAGTTTCTTGCTTGGGATTTCGTTCTTTGGGGCTTTCAAGCTCTATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGA

Coding sequence (CDS)

ATGGAATTGAAGTGGGTATTGCTTTGTTCATCAAGTGAATGGGAGTTTCTTGCTTGGGATTTCGTTCTTTGGGGCTTTCAAGCTCTATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGA

Protein sequence

MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY*
Homology
[Close]
BLAST of Csa2G075390.1 vs. TrEMBL
Match: A0A0A0LH52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075390 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.0e-43
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA 60
          MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA
Sbjct: 1  MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA 60

Query: 61 ENGRDLRTTKLCELSDLRLFRLSSY 86
          ENGRDLRTTKLCELSDLRLFRLSSY
Sbjct: 61 ENGRDLRTTKLCELSDLRLFRLSSY 85

[Close]
BLAST of Csa2G075390.1 vs. NCBI nr
Match: gi|700206161|gb|KGN61280.1| (hypothetical protein Csa_2G075390 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 8.7e-43
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA 60
          MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA
Sbjct: 1  MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA 60

Query: 61 ENGRDLRTTKLCELSDLRLFRLSSY 86
          ENGRDLRTTKLCELSDLRLFRLSSY
Sbjct: 61 ENGRDLRTTKLCELSDLRLFRLSSY 85

The following BLAST results are available for this feature:
BLAST of Csa2G075390.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH52_CUCSA6.0e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075390 PE=4 SV=1[more]
BLAST of Csa2G075390.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206161|gb|KGN61280.1|8.7e-43100.00hypothetical protein Csa_2G075390 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G075390Csa2G075390gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G075390.1Csa2G075390.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G075390.1.cds1Csa2G075390.1.cds1CDS
Csa2G075390.1.cds2Csa2G075390.1.cds2CDS