Csa2G060440.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G060440.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 4724238 .. 4724429 (+)
Sequence length192
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATGTTTGCTTGTGAGAAAGAAGGTTGTTTACCATCAACTTCTCCACTATCGTCGAAACTTGTGAATACTCGGTTTATTCCTATAGTTGATAGTGTCGTAACCTCCTTCTCCATCTTCATGATTCGGACATCCACCACGGACTCTAATGAGGTTGCACAATACCTTTCTTCTATCCATCAGTATTGA

mRNA sequence

ATGGGTATGTTTGCTTGTGAGAAAGAAGGTTGTTTACCATCAACTTCTCCACTATCGTCGAAACTTGTGAATACTCGGTTTATTCCTATAGTTGATAGTGTCGTAACCTCCTTCTCCATCTTCATGATTCGGACATCCACCACGGACTCTAATGAGGTTGCACAATACCTTTCTTCTATCCATCAGTATTGA

Coding sequence (CDS)

ATGGGTATGTTTGCTTGTGAGAAAGAAGGTTGTTTACCATCAACTTCTCCACTATCGTCGAAACTTGTGAATACTCGGTTTATTCCTATAGTTGATAGTGTCGTAACCTCCTTCTCCATCTTCATGATTCGGACATCCACCACGGACTCTAATGAGGTTGCACAATACCTTTCTTCTATCCATCAGTATTGA

Protein sequence

MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSIHQY*
Homology
[Close]
BLAST of Csa2G060440.1 vs. TrEMBL
Match: A0A0A0LHB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060440 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.9e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSI 60
          MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSI
Sbjct: 1  MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSI 60

Query: 61 HQY 64
          HQY
Sbjct: 61 HQY 63

[Close]
BLAST of Csa2G060440.1 vs. NCBI nr
Match: gi|700206044|gb|KGN61163.1| (hypothetical protein Csa_2G060440 [Cucumis sativus])

HSP 1 Score: 127.5 bits (319), Expect = 8.5e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSI 60
          MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSI
Sbjct: 1  MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSSI 60

Query: 61 HQY 64
          HQY
Sbjct: 61 HQY 63

The following BLAST results are available for this feature:
BLAST of Csa2G060440.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHB7_CUCSA5.9e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060440 PE=4 SV=1[more]
BLAST of Csa2G060440.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206044|gb|KGN61163.1|8.5e-27100.00hypothetical protein Csa_2G060440 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G060440Csa2G060440gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G060440.1Csa2G060440.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G060440.1.cds1Csa2G060440.1.cds1CDS