Csa2G055570.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTATCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTATTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGTGTTTACCGTGGGCACGATAACTGGTATTATTATATTTACCTCATTATATTATATAATTAGTTCATGGTGGATATGGAAGAAACTCATAATCTCAAATTTACAGGTTGAAGATTGCAATAGAAAATGTCTCATGA ATGACAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTATCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTATTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGTGTTTACCGTGGGCACGATAACTGGTTGAAGATTGCAATAGAAAATGTCTCATGA ATGACAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTATCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTATTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGTGTTTACCGTGGGCACGATAACTGGTTGAAGATTGCAATAGAAAATGTCTCATGA MTNGSSRRDLLLNSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS*
BLAST of Csa2G055570.1 vs. TrEMBL
Match: A0A0A0LGR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055570 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 9.4e-44 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Csa2G055570.1 vs. TrEMBL
Match: A0A165WVC1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_014935 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.7e-37 Identity = 75/77 (97.40%), Postives = 75/77 (97.40%), Query Frame = 1
BLAST of Csa2G055570.1 vs. TrEMBL
Match: A0A078G2W2_BRANA (BnaC09g16480D protein OS=Brassica napus GN=BnaC09g29120D PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 3.8e-37 Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 1
BLAST of Csa2G055570.1 vs. TrEMBL
Match: A0A0D2ZTA1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 3.8e-37 Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 1
BLAST of Csa2G055570.1 vs. TrEMBL
Match: M1D939_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400034831 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.1e-36 Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 1
BLAST of Csa2G055570.1 vs. NCBI nr
Match: gi|700206001|gb|KGN61120.1| (hypothetical protein Csa_2G055570 [Cucumis sativus]) HSP 1 Score: 183.7 bits (465), Expect = 1.4e-43 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Csa2G055570.1 vs. NCBI nr
Match: gi|1021039922|gb|KZM97703.1| (hypothetical protein DCAR_014935 [Daucus carota subsp. sativus]) HSP 1 Score: 162.9 bits (411), Expect = 2.5e-37 Identity = 75/77 (97.40%), Postives = 75/77 (97.40%), Query Frame = 1
BLAST of Csa2G055570.1 vs. NCBI nr
Match: gi|674871092|emb|CDY63594.1| (BnaUnng00820D [Brassica napus]) HSP 1 Score: 161.8 bits (408), Expect = 5.5e-37 Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 1
BLAST of Csa2G055570.1 vs. NCBI nr
Match: gi|675895250|ref|YP_009049724.1| (hypothetical protein (mitochondrion) [Capsicum annuum]) HSP 1 Score: 160.2 bits (404), Expect = 1.6e-36 Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 1
BLAST of Csa2G055570.1 vs. NCBI nr
Match: gi|703131006|ref|XP_010104774.1| (hypothetical protein L484_018827 [Morus notabilis]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-36 Identity = 73/77 (94.81%), Postives = 73/77 (94.81%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
|