Csa2G005910.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G005910.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 960083 .. 960340 (-)
Sequence length189
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGTGGGGGGAGCCAAAGGCTGACACACACAACCACTTTGGGGTGAGAAAAAGTGAGCCAACTAGACCCAGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

mRNA sequence

ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

Coding sequence (CDS)

ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

Protein sequence

MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPNNG*
Homology
[Close]
BLAST of Csa2G005910.1 vs. TrEMBL
Match: A0A0A0LF38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G005910 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60
          MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN
Sbjct: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60

Query: 61 NG 63
          NG
Sbjct: 61 NG 62

[Close]
BLAST of Csa2G005910.1 vs. NCBI nr
Match: gi|700205526|gb|KGN60645.1| (hypothetical protein Csa_2G005910 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60
          MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN
Sbjct: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60

Query: 61 NG 63
          NG
Sbjct: 61 NG 62

The following BLAST results are available for this feature:
BLAST of Csa2G005910.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF38_CUCSA1.1e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G005910 PE=4 SV=1[more]
BLAST of Csa2G005910.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205526|gb|KGN60645.1|1.5e-28100.00hypothetical protein Csa_2G005910 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G005910Csa2G005910gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G005910.1Csa2G005910.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G005910.1.cds2Csa2G005910.1.cds2CDS
Csa2G005910.1.cds1Csa2G005910.1.cds1CDS