Csa2G005910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G005910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 960083 .. 960340 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGTGGGGGGAGCCAAAGGCTGACACACACAACCACTTTGGGGTGAGAAAAAGTGAGCCAACTAGACCCAGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

mRNA sequence

ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

Coding sequence (CDS)

ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

Protein sequence

MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPNNG*
Homology
[Close]
BLAST of Csa2G005910 vs. TrEMBL
Match: A0A0A0LF38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G005910 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60
          MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN
Sbjct: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60

Query: 61 NG 63
          NG
Sbjct: 61 NG 62

[Close]
BLAST of Csa2G005910 vs. NCBI nr
Match: gi|700205526|gb|KGN60645.1| (hypothetical protein Csa_2G005910 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60
          MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN
Sbjct: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60

Query: 61 NG 63
          NG
Sbjct: 61 NG 62

The following BLAST results are available for this feature:
BLAST of Csa2G005910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF38_CUCSA1.1e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G005910 PE=4 SV=1[more]
BLAST of Csa2G005910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205526|gb|KGN60645.1|1.5e-28100.00hypothetical protein Csa_2G005910 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G005910.1Csa2G005910.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G005910Watermelon (97103) v2cuwmbB103
Csa2G005910Watermelon (97103) v2cuwmbB142
Csa2G005910Watermelon (97103) v2cuwmbB157
Csa2G005910Watermelon (97103) v2cuwmbB162
Csa2G005910Wax gourdcuwgoB130
Csa2G005910Wax gourdcuwgoB172
Csa2G005910Wax gourdcuwgoB214
Csa2G005910Cucumber (Chinese Long) v2cucuB008
Csa2G005910Cucumber (Chinese Long) v2cucuB049
Csa2G005910Cucumber (Chinese Long) v2cucuB084
Csa2G005910Cucumber (Gy14) v1cgycuB150
Csa2G005910Cucumber (Gy14) v1cgycuB234
Csa2G005910Cucurbita maxima (Rimu)cmacuB075
Csa2G005910Cucurbita maxima (Rimu)cmacuB119
Csa2G005910Cucurbita maxima (Rimu)cmacuB172
Csa2G005910Cucurbita maxima (Rimu)cmacuB173
Csa2G005910Cucurbita maxima (Rimu)cmacuB791
Csa2G005910Cucurbita moschata (Rifu)cmocuB065
Csa2G005910Cucurbita moschata (Rifu)cmocuB105
Csa2G005910Cucurbita moschata (Rifu)cmocuB157
Csa2G005910Cucurbita moschata (Rifu)cmocuB783
Csa2G005910Melon (DHL92) v3.5.1cumeB090
Csa2G005910Melon (DHL92) v3.5.1cumeB121
Csa2G005910Melon (DHL92) v3.5.1cumeB140
Csa2G005910Watermelon (Charleston Gray)cuwcgB096
Csa2G005910Watermelon (Charleston Gray)cuwcgB148
Csa2G005910Watermelon (Charleston Gray)cuwcgB164
Csa2G005910Watermelon (Charleston Gray)cuwcgB168
Csa2G005910Watermelon (97103) v1cuwmB110
Csa2G005910Watermelon (97103) v1cuwmB120
Csa2G005910Watermelon (97103) v1cuwmB162
Csa2G005910Watermelon (97103) v1cuwmB168
Csa2G005910Cucurbita pepo (Zucchini)cpecuB103
Csa2G005910Cucurbita pepo (Zucchini)cpecuB370
Csa2G005910Cucurbita pepo (Zucchini)cpecuB662
Csa2G005910Cucurbita pepo (Zucchini)cpecuB821
Csa2G005910Bottle gourd (USVL1VR-Ls)culsiB138
Csa2G005910Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G005910Bottle gourd (USVL1VR-Ls)culsiB113
Csa2G005910Bottle gourd (USVL1VR-Ls)culsiB131
Csa2G005910Bottle gourd (USVL1VR-Ls)culsiB141
Csa2G005910Cucumber (Gy14) v2cgybcuB056
Csa2G005910Cucumber (Gy14) v2cgybcuB061
Csa2G005910Cucumber (Gy14) v2cgybcuB302
Csa2G005910Melon (DHL92) v3.6.1cumedB118
Csa2G005910Melon (DHL92) v3.6.1cumedB099
Csa2G005910Melon (DHL92) v3.6.1cumedB109
Csa2G005910Melon (DHL92) v3.6.1cumedB133
Csa2G005910Silver-seed gourdcarcuB0042
Csa2G005910Silver-seed gourdcarcuB0139
Csa2G005910Silver-seed gourdcarcuB0304
Csa2G005910Silver-seed gourdcarcuB0598
Csa2G005910Silver-seed gourdcarcuB0988