Csa1G073630.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa1G073630.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7440278 .. 7440874 (+)
Sequence length390
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTAAGATCGACCCCTCCATTCTTGTGTAAAGCTTCTTCGGTCATTTTCCAGTAGGCTTTTCATTATCTCAACGGCTCTTTTATAATTTTCTATATAGTTTTTGTCAGCTAAATGGGCTACAGGCCGAACCCGGAGTTTTCGATGTGGGGTTAGTGGAAAGTCTTTGATTTGGACAGTGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGTAGAGAGTGGTAAGCCCAAGAAGAGGGCTCTTCTCCGATCAAACTTGTCCAAAGAGTTGCATTTGTTGCTGGCTCTGCAGGAAACTTGAGATATATTATGAATGAGGAATTTAGTTCATGGAGGGATAATGAATGGTGGGGATTTTTTGTTAGTGCAGAGAAGTGGGATGGGAAAAGTGGTGGAACTGGTGGCGGTTGCCGCGGCGGAGTAAAGTGGCATTTTGAAAATAATTAG

mRNA sequence

ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTAAGATCGACCCCTCCATTCTTGTGTAAAGCTTCTTCGGTCATTTTCCATGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGAAACTTGAGATATATTATGAATGAGGAATTTAGTTCATGGAGGGATAATGAATGGTGGGGATTTTTTGTTAGTGCAGAGAAGTGGGATGGGAAAAGTGGTGGAACTGGTGGCGGTTGCCGCGGCGGAGTAAAGTGGCATTTTGAAAATAATTAG

Coding sequence (CDS)

ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTAAGATCGACCCCTCCATTCTTGTGTAAAGCTTCTTCGGTCATTTTCCATGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGAAACTTGAGATATATTATGAATGAGGAATTTAGTTCATGGAGGGATAATGAATGGTGGGGATTTTTTGTTAGTGCAGAGAAGTGGGATGGGAAAAGTGGTGGAACTGGTGGCGGTTGCCGCGGCGGAGTAAAGTGGCATTTTGAAAATAATTAG

Protein sequence

MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWRGYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRGGVKWHFENN*
Homology
[Close]
BLAST of Csa1G073630.1 vs. TrEMBL
Match: A0A0A0LRV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073630 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-72
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60
           MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR
Sbjct: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60

Query: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120
           GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG
Sbjct: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120

Query: 121 GVKWHFENN 130
           GVKWHFENN
Sbjct: 121 GVKWHFENN 129

[Close]
BLAST of Csa1G073630.1 vs. NCBI nr
Match: gi|700209559|gb|KGN64655.1| (hypothetical protein Csa_1G073630 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-72
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60
           MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR
Sbjct: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60

Query: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120
           GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG
Sbjct: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120

Query: 121 GVKWHFENN 130
           GVKWHFENN
Sbjct: 121 GVKWHFENN 129

The following BLAST results are available for this feature:
BLAST of Csa1G073630.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRV4_CUCSA1.1e-72100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073630 PE=4 SV=1[more]
BLAST of Csa1G073630.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209559|gb|KGN64655.1|1.6e-72100.00hypothetical protein Csa_1G073630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa1G073630Csa1G073630gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa1G073630.1Csa1G073630.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa1G073630.1.cds1Csa1G073630.1.cds1CDS
Csa1G073630.1.cds2Csa1G073630.1.cds2CDS
Csa1G073630.1.cds3Csa1G073630.1.cds3CDS