Csa1G073630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G073630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7440278 .. 7440874 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTAAGATCGACCCCTCCATTCTTGTGTAAAGCTTCTTCGGTCATTTTCCAGTAGGCTTTTCATTATCTCAACGGCTCTTTTATAATTTTCTATATAGTTTTTGTCAGCTAAATGGGCTACAGGCCGAACCCGGAGTTTTCGATGTGGGGTTAGTGGAAAGTCTTTGATTTGGACAGTGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGTAGAGAGTGGTAAGCCCAAGAAGAGGGCTCTTCTCCGATCAAACTTGTCCAAAGAGTTGCATTTGTTGCTGGCTCTGCAGGAAACTTGAGATATATTATGAATGAGGAATTTAGTTCATGGAGGGATAATGAATGGTGGGGATTTTTTGTTAGTGCAGAGAAGTGGGATGGGAAAAGTGGTGGAACTGGTGGCGGTTGCCGCGGCGGAGTAAAGTGGCATTTTGAAAATAATTAG

mRNA sequence

ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTAAGATCGACCCCTCCATTCTTGTGTAAAGCTTCTTCGGTCATTTTCCATGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGAAACTTGAGATATATTATGAATGAGGAATTTAGTTCATGGAGGGATAATGAATGGTGGGGATTTTTTGTTAGTGCAGAGAAGTGGGATGGGAAAAGTGGTGGAACTGGTGGCGGTTGCCGCGGCGGAGTAAAGTGGCATTTTGAAAATAATTAG

Coding sequence (CDS)

ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTAAGATCGACCCCTCCATTCTTGTGTAAAGCTTCTTCGGTCATTTTCCATGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGAAACTTGAGATATATTATGAATGAGGAATTTAGTTCATGGAGGGATAATGAATGGTGGGGATTTTTTGTTAGTGCAGAGAAGTGGGATGGGAAAAGTGGTGGAACTGGTGGCGGTTGCCGCGGCGGAGTAAAGTGGCATTTTGAAAATAATTAG

Protein sequence

MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWRGYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRGGVKWHFENN*
Homology
[Close]
BLAST of Csa1G073630 vs. TrEMBL
Match: A0A0A0LRV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073630 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-72
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60
           MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR
Sbjct: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60

Query: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120
           GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG
Sbjct: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120

Query: 121 GVKWHFENN 130
           GVKWHFENN
Sbjct: 121 GVKWHFENN 129

[Close]
BLAST of Csa1G073630 vs. NCBI nr
Match: gi|700209559|gb|KGN64655.1| (hypothetical protein Csa_1G073630 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-72
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60
           MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR
Sbjct: 1   MERKKQPGIMDLKLSRKLQLRSTPPFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWR 60

Query: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120
           GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG
Sbjct: 61  GYYWIIRRRDILGRELKLRNLRYIMNEEFSSWRDNEWWGFFVSAEKWDGKSGGTGGGCRG 120

Query: 121 GVKWHFENN 130
           GVKWHFENN
Sbjct: 121 GVKWHFENN 129

The following BLAST results are available for this feature:
BLAST of Csa1G073630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRV4_CUCSA1.1e-72100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073630 PE=4 SV=1[more]
BLAST of Csa1G073630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209559|gb|KGN64655.1|1.6e-72100.00hypothetical protein Csa_1G073630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G073630.1Csa1G073630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G073630CSPI01G11890Wild cucumber (PI 183967)cpicuB000
Csa1G073630CsGy1G011870Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G073630Cucumber (Gy14) v1cgycuB070
Csa1G073630Cucumber (Gy14) v1cgycuB015
Csa1G073630Cucumber (Gy14) v1cgycuB170
Csa1G073630Cucurbita maxima (Rimu)cmacuB010
Csa1G073630Cucurbita maxima (Rimu)cmacuB218
Csa1G073630Cucurbita maxima (Rimu)cmacuB318
Csa1G073630Cucurbita maxima (Rimu)cmacuB391
Csa1G073630Cucurbita maxima (Rimu)cmacuB649
Csa1G073630Cucurbita maxima (Rimu)cmacuB848
Csa1G073630Cucurbita moschata (Rifu)cmocuB000
Csa1G073630Cucurbita moschata (Rifu)cmocuB203
Csa1G073630Cucurbita moschata (Rifu)cmocuB306
Csa1G073630Cucurbita moschata (Rifu)cmocuB380
Csa1G073630Cucurbita moschata (Rifu)cmocuB419
Csa1G073630Cucurbita moschata (Rifu)cmocuB637
Csa1G073630Melon (DHL92) v3.5.1cumeB027
Csa1G073630Melon (DHL92) v3.5.1cumeB077
Csa1G073630Melon (DHL92) v3.5.1cumeB083
Csa1G073630Watermelon (Charleston Gray)cuwcgB009
Csa1G073630Watermelon (Charleston Gray)cuwcgB012
Csa1G073630Watermelon (Charleston Gray)cuwcgB035
Csa1G073630Watermelon (97103) v1cuwmB008
Csa1G073630Watermelon (97103) v1cuwmB043
Csa1G073630Watermelon (97103) v1cuwmB075
Csa1G073630Cucurbita pepo (Zucchini)cpecuB029
Csa1G073630Cucurbita pepo (Zucchini)cpecuB057
Csa1G073630Cucurbita pepo (Zucchini)cpecuB203
Csa1G073630Cucurbita pepo (Zucchini)cpecuB474
Csa1G073630Cucurbita pepo (Zucchini)cpecuB506
Csa1G073630Cucurbita pepo (Zucchini)cpecuB770
Csa1G073630Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G073630Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G073630Bottle gourd (USVL1VR-Ls)culsiB050
Csa1G073630Cucumber (Gy14) v2cgybcuB095
Csa1G073630Cucumber (Gy14) v2cgybcuB239
Csa1G073630Melon (DHL92) v3.6.1cumedB022
Csa1G073630Melon (DHL92) v3.6.1cumedB072
Csa1G073630Melon (DHL92) v3.6.1cumedB077
Csa1G073630Silver-seed gourdcarcuB0163
Csa1G073630Silver-seed gourdcarcuB0661
Csa1G073630Silver-seed gourdcarcuB0916
Csa1G073630Silver-seed gourdcarcuB0963
Csa1G073630Watermelon (97103) v2cuwmbB000
Csa1G073630Watermelon (97103) v2cuwmbB016
Csa1G073630Watermelon (97103) v2cuwmbB023
Csa1G073630Watermelon (97103) v2cuwmbB032
Csa1G073630Wax gourdcuwgoB000
Csa1G073630Wax gourdcuwgoB023
Csa1G073630Cucumber (Chinese Long) v2cucuB015
Csa1G073630Cucumber (Chinese Long) v2cucuB035