Csa1G070080.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G070080.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein; contains IPR008930 (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid)
Location	Chr1 : 7042036 .. 7042800 (-)
Sequence length	654

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTTCAATCCTTTCTTGCTTCTCCCTGTCCAAAAATATTCATTTATCAAACAAAAAATCCACACAAAGTTCAGAATAACAACGCATGGCTTCAATTGAATGACCCTCTTGAAAAATCTTTTGCCAGAAAAGGGTGCATTCATGCCTTGAATTCTTCTTCATCATCCAATAAGTGCATCATCTCCAATTTGAAAATTGTATATTATCTTATTATTTTGGTCCATTGATTTTGTCTCCTTATGATTTCTCCTTTCATTTATTTATTTATTATTTTTTATGATGAGTCTTATAAATGATGATGTGTATAGGAGGAGTTTGGGGTTGAAACTCCAGCGAGAAAAGTGGAGATTTTAAAGGACATACTAACAGAAACAAGAGATGATCTGTGTTGGGAACGTTTGGAAATAATTGATGCAGCCCAATGGCTTGGCATTGACAACCAGTTCGAAGAAGAGATTGAAGATGTTCTTAAGAGGCAATATGATTTGATAAATGCATATCGTTTTGATGGAGACATGGATCTTCACAAAGCTGCCCTCCTTTTTCGACTTTTGAGACAACAACGATACCTTATATCTCAAGGTTCATATTCCACACTCTTTACCAACGAATTAAGCTTGAAGGTCTATAAGAAACATGGTTGGAATCCCATTGGTTCCTTGAGAAAAACGGTATTTTTTGTTAGATCCAAATTTAGCATTTTGGAAACCAAACGGATTAACAAATGCTATATGACAGGGAAGTACTTACAAAAACATTAA

mRNA sequence

ATGTATCTTCAATCCTTTCTTGCTTCTCCCTGTCCAAAAATATTCATTTATCAAACAAAAAATCCACACAAAGTTCAGAATAACAACGCATGGCTTCAATTGAATGACCCTCTTGAAAAATCTTTTGCCAGAAAAGGGTGCATTCATGCCTTGAATTCTTCTTCATCATCCAATAAGTGCATCATCTCCAATTTGAAAATTGAGGAGTTTGGGGTTGAAACTCCAGCGAGAAAAGTGGAGATTTTAAAGGACATACTAACAGAAACAAGAGATGATCTGTGTTGGGAACGTTTGGAAATAATTGATGCAGCCCAATGGCTTGGCATTGACAACCAGTTCGAAGAAGAGATTGAAGATGTTCTTAAGAGGCAATATGATTTGATAAATGCATATCGTTTTGATGGAGACATGGATCTTCACAAAGCTGCCCTCCTTTTTCGACTTTTGAGACAACAACGATACCTTATATCTCAAGGTTCATATTCCACACTCTTTACCAACGAATTAAGCTTGAAGGTCTATAAGAAACATGGTTGGAATCCCATTGGTTCCTTGAGAAAAACGGTATTTTTTGTTAGATCCAAATTTAGCATTTTGGAAACCAAACGGATTAACAAATGCTATATGACAGGGAAGTACTTACAAAAACATTAA

Coding sequence (CDS)

ATGTATCTTCAATCCTTTCTTGCTTCTCCCTGTCCAAAAATATTCATTTATCAAACAAAAAATCCACACAAAGTTCAGAATAACAACGCATGGCTTCAATTGAATGACCCTCTTGAAAAATCTTTTGCCAGAAAAGGGTGCATTCATGCCTTGAATTCTTCTTCATCATCCAATAAGTGCATCATCTCCAATTTGAAAATTGAGGAGTTTGGGGTTGAAACTCCAGCGAGAAAAGTGGAGATTTTAAAGGACATACTAACAGAAACAAGAGATGATCTGTGTTGGGAACGTTTGGAAATAATTGATGCAGCCCAATGGCTTGGCATTGACAACCAGTTCGAAGAAGAGATTGAAGATGTTCTTAAGAGGCAATATGATTTGATAAATGCATATCGTTTTGATGGAGACATGGATCTTCACAAAGCTGCCCTCCTTTTTCGACTTTTGAGACAACAACGATACCTTATATCTCAAGGTTCATATTCCACACTCTTTACCAACGAATTAAGCTTGAAGGTCTATAAGAAACATGGTTGGAATCCCATTGGTTCCTTGAGAAAAACGGTATTTTTTGTTAGATCCAAATTTAGCATTTTGGAAACCAAACGGATTAACAAATGCTATATGACAGGGAAGTACTTACAAAAACATTAA

Protein sequence

MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKCIISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWNPIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH*

Homology

[Close]

BLAST of Csa1G070080.1 vs. Swiss-Prot
Match: TPS13_RICCO (Probable terpene synthase 13 OS=Ricinus communis GN=TPS13 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-09
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 1


Query: 56  SSNKCIISNLKIE-----EFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGID 115
           S N+ ++S L  +     +  V    R+    K IL +  +    E L +IDA Q LGID
Sbjct: 43  SINQTLVSPLSAQCIHLTDEDVRIKERRTRAFKHILRKEGEG-SHEVLAMIDAIQRLGID 102

Query: 116 NQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSY 162
           + F++EI+++L+RQY + + Y    D DLH  AL FRLLRQ  Y +S G +
Sbjct: 103 HHFQDEIDEILQRQYTIPSYY---NDNDLHGLALRFRLLRQGGYNVSAGVF 149

HSP 2 Score: 42.0 bits (97), Expect = 1.0e-02
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRKT 189
           TNE+  KVYK+HGWNP+ SLR+T
Sbjct: 371 TNEIGYKVYKQHGWNPVHSLRET 393

[Close]

BLAST of Csa1G070080.1 vs. Swiss-Prot
Match: NES1_FRAAN ((3S,6E)-nerolidol synthase 1 OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.3e-09
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDG 135
           ++K+E+LK +L    +    E L +IDA Q LGID  F+ EI+++L +Q  +++A     
Sbjct: 19  SQKLELLKTVLRNVAELDALEGLNMIDAVQRLGIDYNFQREIDEILHKQMSIVSARD--- 78

Query: 136 DMDLHKAALLFRLLRQQRYLISQGSYS 163
             DLH+ AL FRLLRQ  Y + +  ++
Sbjct: 79  --DLHEVALRFRLLRQHGYFVPEDVFN 100

HSP 2 Score: 37.4 bits (85), Expect = 2.5e-01
Identity = 15/21 (71.43%), Postives = 15/21 (71.43%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLR 187
           TNE S KVY KHGWNP+ SL+
Sbjct: 318 TNEFSSKVYLKHGWNPLQSLK 338

[Close]

BLAST of Csa1G070080.1 vs. Swiss-Prot
Match: NES2_FRAAN ((3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 77  RKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGD 136
           +K+E+ +++L    +    E L +IDA Q LGID  F+ EI+++L +Q   ++A      
Sbjct: 79  QKLELFRNVLRNVAELDALEGLNMIDAVQRLGIDFHFQREIDEILHKQMSNVSA-----S 138

Query: 137 MDLHKAALLFRLLRQQRYLISQGSYS 163
            DLH+ AL FRLLRQ  Y + +  ++
Sbjct: 139 DDLHEVALRFRLLRQHGYFVPEDVFN 159

HSP 2 Score: 39.7 bits (91), Expect = 4.9e-02
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLR 187
           TNE+S KVY+KHGWNP+ SL+
Sbjct: 377 TNEISCKVYQKHGWNPLQSLK 397

[Close]

BLAST of Csa1G070080.1 vs. Swiss-Prot
Match: NES1_FRAVE ((3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDG 135
           ++K+E+ +++L    +    E L +IDA Q LGID  F+ EI+++L +Q  +++A     
Sbjct: 80  SQKLELFRNVLRNAAELDALEGLNMIDAVQRLGIDYHFQREIDEILHKQMGIVSACD--- 139

Query: 136 DMDLHKAALLFRLLRQQRYLISQGSYS 163
             DL++ AL FRLLRQ  Y + +  ++
Sbjct: 140 --DLYEVALRFRLLRQHGYFVPEDVFN 161

HSP 2 Score: 38.9 bits (89), Expect = 8.4e-02
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLR 187
           TNE S KVY+KHGWNP+ SL+
Sbjct: 379 TNEFSCKVYQKHGWNPLRSLK 399

[Close]

BLAST of Csa1G070080.1 vs. Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-07
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 1


Query: 58  NKCIISNLKIEEFGVETPARKVEILKD----ILTETRDDLCWERLEIIDAAQWLGIDNQF 117
           N   I +L+IE  G ET  R++ +LK+    +L +  + L  E+LE+I+  Q LG+   F
Sbjct: 68  NHDYIESLRIEYVG-ETCTRQINVLKEQVRMMLHKVVNPL--EQLELIEILQRLGLSYHF 127

Query: 118 EEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKV 177
           EEEI+ +L   Y+  +        +L+  AL FRLLRQ  Y +SQ  +++      S K 
Sbjct: 128 EEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKA 187

Query: 178 YKKHGWNPIGSLRKTVFFVRSKFSILETKR 204
                   + SL +  FF+    +ILE  R
Sbjct: 188 CLCEDTKGMLSLYEASFFLIEGENILEEAR 214

[Close]

BLAST of Csa1G070080.1 vs. TrEMBL
Match: A0A0A0LX82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G070080 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 9.7e-122
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60
           MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC
Sbjct: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60

Query: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120
           IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV
Sbjct: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120

Query: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180
           LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN
Sbjct: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180

Query: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 218
           PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH
Sbjct: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 217

[Close]

BLAST of Csa1G070080.1 vs. TrEMBL
Match: A0A0A0LUC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-16
Identity = 68/155 (43.87%), Postives = 85/155 (54.84%), Query Frame = 1


Query: 26  QNNNAWLQLNDPLEKSFARKGCIHALNSS------SSSNKCIISNLKIEEFGVE--TPAR 85
           QNNN    +N+PL          H+L S+      S     I+SN      G+E    A 
Sbjct: 20  QNNNFNPIINNPLLNKQIIYLPHHSLLSTPLKPFDSKIQPSILSN------GIEYGEAAI 79

Query: 86  KVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDM 145
           K  ILKD+L E  D   WE L +IDA Q LGID  F+EEIE VL+RQY L NA +++ D 
Sbjct: 80  KGRILKDVLREIGDP--WECLNLIDATQRLGIDYHFQEEIEAVLQRQYVLFNAIQYNPDT 139

Query: 146 DLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
           DLHKAALLFRL RQQ YL+S   + +    +   K
Sbjct: 140 DLHKAALLFRLFRQQGYLVSADVFKSFMDKKGKFK 166

[Close]

BLAST of Csa1G070080.1 vs. TrEMBL
Match: A0A0A0LUC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1)

HSP 1 Score: 34.7 bits (78), Expect = 1.8e+02
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRK 188
           TNE+   +Y+KHGWNPI  L K
Sbjct: 373 TNEICYHIYQKHGWNPIHFLHK 394

HSP 2 Score: 72.8 bits (177), Expect = 5.9e-10
Identity = 56/169 (33.14%), Postives = 84/169 (49.70%), Query Frame = 1


Query: 6   FLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKCIISNL 65
           F+     K+      N + +  NN    +ND +  S   K   +    SS+ N     ++
Sbjct: 17  FIPKHISKVGNRNLNNINSLLPNNKKGSINDNIGVSARLKRFTYPSEHSSNFN----DDI 76

Query: 66  KIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQY 125
            I+       A+K+E++K IL +  DD  +E L +ID  Q LGID  F++EIE +L+RQY
Sbjct: 77  HIKH------AKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQY 136

Query: 126 DLINAYRFDGDM--DLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
            +   +  DGD   DL + AL FRLLRQQ Y +S   ++     E   K
Sbjct: 137 SI---FFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFK 172

[Close]

BLAST of Csa1G070080.1 vs. TrEMBL
Match: A0A0A0LX78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-09
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1


Query: 78  KVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYR-FDGD 137
           +++ILK +L+ET  +   E L +ID  Q LGID+ F+EEIE +LK QY ++  +  FD  
Sbjct: 94  EMKILKHLLSETAKNGSLEVLNMIDGIQRLGIDHCFKEEIEAILKEQYTIMATHHYFDTK 153

Query: 138 MDLHKAALLFRLLRQQRYLISQGSYS--TLFTNELSLKVYK 176
             LH+ AL FRLLRQ  Y I    +   T    EL+ KV++
Sbjct: 154 CSLHEVALRFRLLRQHGYFIPSDVFESFTAKNGELNKKVFE 194

[Close]

BLAST of Csa1G070080.1 vs. TrEMBL
Match: A0A0A0LX78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1)

HSP 1 Score: 34.3 bits (77), Expect = 2.3e+02
Identity = 31/92 (33.70%), Postives = 43/92 (46.74%), Query Frame = 1


Query: 110 DNQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQ--QRYLIS---------Q 169
           D +F EE  ++ K    +   Y  D   DL+ +    RL  Q  QR+ +          +
Sbjct: 330 DPKFSEERVELTK---SISFIYLLDDIYDLYGSIEELRLFTQAIQRWNLEAINSLPHPMK 389

Query: 170 GSYSTLF--TNELSLKVYKKHGWNPIGSLRKT 189
             Y  L+  TNELS K   KHGWNPI  L+K+
Sbjct: 390 FCYIKLYETTNELSHKFSLKHGWNPIHCLQKS 418

HSP 2 Score: 69.7 bits (169), Expect = 5.0e-09
Identity = 41/113 (36.28%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLI---NAYR 135
           ARK+++ + +L++  ++   E L +IDA Q LGID+ F+EEI+ +L++Q+ +I   +A+ 
Sbjct: 71  ARKLDVFRHVLSKLGEEAV-EGLNMIDAVQRLGIDHHFQEEIDQILQKQHLIITSGSAHG 130

Query: 136 FDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWNPIGSL 186
            D   DLH+ A+ FRLLRQQ Y +    ++    +E S K     G   + SL
Sbjct: 131 ADHHSDLHEVAVRFRLLRQQGYFVPDDVFNKFKESEGSFKKMLSEGIQGLMSL 182

[Close]

BLAST of Csa1G070080.1 vs. TAIR10
Match: AT3G25820.1 (AT3G25820.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 58  NKCIISNLKIEEFGVETPARKVEILKDILTETRDD---LCWERLEIIDAAQWLGIDNQFE 117
           N C + +++  ++  ET     ++LK  +    DD      E+LE+ID  Q LG+   FE
Sbjct: 58  NHCYLLSIE-NKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFE 117

Query: 118 EEIEDVLKRQYDLI--NAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 177
            EI D L   +  +  N ++ D + DLH  +L FRLLRQ  + +S+  +  +  +++   
Sbjct: 118 IEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVII-DQIESN 177

Query: 178 VYKKHGWNPIGSL 186
            +K +  N I SL
Sbjct: 178 TFKTNNINGIISL 188

[Close]

BLAST of Csa1G070080.1 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 58  NKCIISNLKIEEFGVETPARKVEILKDILTETRDD---LCWERLEIIDAAQWLGIDNQFE 117
           N C + +++  ++  ET     ++LK  +    DD      E+LE+ID  Q LG+   FE
Sbjct: 58  NHCYLLSIE-NKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFE 117

Query: 118 EEIEDVLKRQYDLI--NAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 177
            EI D L   +  +  N ++ D + DLH  +L FRLLRQ  + +S+  +  +  +++   
Sbjct: 118 IEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVII-DQIESN 177

Query: 178 VYKKHGWNPIGSL 186
            +K +  N I SL
Sbjct: 178 TFKTNNINGIISL 188

[Close]

BLAST of Csa1G070080.1 vs. TAIR10
Match: AT3G25810.1 (AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07
Identity = 35/105 (33.33%), Postives = 53/105 (50.48%), Query Frame = 1


Query: 62  ISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVL 121
           I N  + E  V T     + +K +L E       E+LE+ID  Q LG+   FE+EI ++L
Sbjct: 65  IENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNIL 124

Query: 122 KRQY--DLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTL 165
              +  +  N ++ D + DLH  AL FRLLRQ  + +S+  +  +
Sbjct: 125 TNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVI 169

[Close]

BLAST of Csa1G070080.1 vs. TAIR10
Match: AT1G61680.1 (AT1G61680.1 terpene synthase 14)

HSP 1 Score: 51.6 bits (122), Expect = 7.1e-07
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 1


Query: 43  ARKGCIHALNSSSSSNKCIISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIID 102
           A++  +  +++S S+      N    E+  E   +K+   K+IL+    D+  E LE+ID
Sbjct: 43  AKRSILRNVHASVSNPSKQFHNKTSLEYLHELNIKKI---KNILS-ANVDVPSENLEMID 102

Query: 103 AAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYS 162
             Q LGID  F +EIE  L   Y      +F+G  DLH+ AL FRLLRQ+ + + +    
Sbjct: 103 VIQSLGIDLHFRQEIEQTLHMIYK--EGLQFNG--DLHEIALRFRLLRQEGHYVQE---- 160

Query: 163 TLFTNELSLK 173
            +F N L  K
Sbjct: 163 IIFKNILDKK 160

HSP 2 Score: 40.4 bits (93), Expect = 1.6e-03
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = 1


Query: 164 LFTNELSLKVYKKHGWNPIGSLRKTVFFVRSKFSILETKRINKCYM--TGKYLQ 216
           + T E+S+K+YK HGWNP  +LR++   +   F ++E K  N  Y+  T +Y++
Sbjct: 374 MITTEISMKIYKSHGWNPTYALRQSWASLCKAF-LVEAKWFNSGYLPTTEEYMK 426

[Close]

BLAST of Csa1G070080.1 vs. TAIR10
Match: AT4G16730.1 (AT4G16730.1 terpene synthase 02)

HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06
Identity = 39/134 (29.10%), Postives = 68/134 (50.75%), Query Frame = 1


Query: 72  VETPARKVEILKDILTETRDDL--CWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLIN 131
           VET A K  + K+ + +T +++    E+LE+ID+ Q LGI   ++ EI D+L++ +D   
Sbjct: 18  VET-AEKAILFKEEVRKTLNEIEGSIEQLEMIDSLQRLGISYHYKHEIHDILRKIHDQHG 77

Query: 132 AYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWNPIGSLRKTV 191
               +   DLH  +L F LLRQ  + +SQ ++    +     +         + SL +  
Sbjct: 78  EIERE-TQDLHATSLEFILLRQHGFDVSQDAFDVFISETGEFRKTLHSDIKGLLSLYEAS 137

Query: 192 FF-VRSKFSILETK 203
           +F + S+F + ET+
Sbjct: 138 YFSMDSEFKLKETR 149

[Close]

BLAST of Csa1G070080.1 vs. NCBI nr
Match: gi|778658558|ref|XP_011652894.1| (PREDICTED: myrcene synthase, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-121
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60
           MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC
Sbjct: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60

Query: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120
           IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV
Sbjct: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120

Query: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180
           LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN
Sbjct: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180

Query: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 218
           PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH
Sbjct: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 217

[Close]

BLAST of Csa1G070080.1 vs. NCBI nr
Match: gi|778658562|ref|XP_011652895.1| (PREDICTED: probable terpene synthase 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 7.2e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60
           MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC
Sbjct: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60

Query: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120
           IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV
Sbjct: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120

Query: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQG 160
           LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQG
Sbjct: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQG 159

[Close]

BLAST of Csa1G070080.1 vs. NCBI nr
Match: gi|659068831|ref|XP_008446523.1| (PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 7.5e-67
Identity = 140/186 (75.27%), Postives = 151/186 (81.18%), Query Frame = 1


Query: 1   MYLQSFLA-SPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNK 60
           +YLQSFLA  P PKIFI QTK PHK  NNNAWLQLN+PLEKSFA KG IHALNSSSSSNK
Sbjct: 5   IYLQSFLAFPPRPKIFISQTKIPHKAHNNNAWLQLNNPLEKSFAEKGFIHALNSSSSSNK 64

Query: 61  CIISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIED 120
            IIS+LKIEE GVETPARKV+ILK++LTETRDDLC E LEIIDAAQ LGIDNQFEEEIED
Sbjct: 65  IIISDLKIEELGVETPARKVKILKELLTETRDDLCLECLEIIDAAQRLGIDNQFEEEIED 124

Query: 121 VLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGW 180
           VLKRQY LINAY FDGD+DLHKAALLFRLLRQQRYL+SQ  +      +   K   K   
Sbjct: 125 VLKRQYALINAYHFDGDVDLHKAALLFRLLRQQRYLVSQDVFKVFLNEKGKFKEKLKADL 184

Query: 181 NPIGSL 186
           N + SL
Sbjct: 185 NGMTSL 190

[Close]

BLAST of Csa1G070080.1 vs. NCBI nr
Match: gi|659068831|ref|XP_008446523.1| (PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-03
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRKT 189
           TNELSLKVYKKHGWNP+GSLRKT
Sbjct: 393 TNELSLKVYKKHGWNPVGSLRKT 415

HSP 2 Score: 95.1 bits (235), Expect = 1.6e-16
Identity = 68/155 (43.87%), Postives = 85/155 (54.84%), Query Frame = 1


Query: 26  QNNNAWLQLNDPLEKSFARKGCIHALNSS------SSSNKCIISNLKIEEFGVE--TPAR 85
           QNNN    +N+PL          H+L S+      S     I+SN      G+E    A 
Sbjct: 20  QNNNFNPIINNPLLNKQIIYLPHHSLLSTPLKPFDSKIQPSILSN------GIEYGEAAI 79

Query: 86  KVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDM 145
           K  ILKD+L E  D   WE L +IDA Q LGID  F+EEIE VL+RQY L NA +++ D 
Sbjct: 80  KGRILKDVLREIGDP--WECLNLIDATQRLGIDYHFQEEIEAVLQRQYVLFNAIQYNPDT 139

Query: 146 DLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
           DLHKAALLFRL RQQ YL+S   + +    +   K
Sbjct: 140 DLHKAALLFRLFRQQGYLVSADVFKSFMDKKGKFK 166

[Close]

BLAST of Csa1G070080.1 vs. NCBI nr
Match: gi|700209493|gb|KGN64589.1| (hypothetical protein Csa_1G068570 [Cucumis sativus])

HSP 1 Score: 34.7 bits (78), Expect = 2.5e+02
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRK 188
           TNE+   +Y+KHGWNPI  L K
Sbjct: 373 TNEICYHIYQKHGWNPIHFLHK 394

HSP 2 Score: 93.2 bits (230), Expect = 6.0e-16
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDG 135
           A K  ILKD+L E  D   WE L +IDA Q LGID  F+EEIE VL+RQY L NA +++ 
Sbjct: 60  AIKGRILKDVLREIGDP--WECLNLIDATQRLGIDYHFQEEIEAVLQRQYVLFNAIQYNP 119

Query: 136 DMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
           D DLHKAALLFRL RQQ YL+S   + +    +   K
Sbjct: 120 DTDLHKAALLFRLFRQQGYLVSADVFKSFMDKKGKFK 154

The following BLAST results are available for this feature:

BLAST of Csa1G070080.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPS13_RICCO	5.5e-09	37.84	Probable terpene synthase 13 OS=Ricinus communis GN=TPS13 PE=3 SV=1	[more]
NES1_FRAAN	9.3e-09	37.93	(3S,6E)-nerolidol synthase 1 OS=Fragaria ananassa PE=1 SV=1	[more]
NES2_FRAAN	1.8e-07	36.05	(3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial OS=Fragaria ananassa P...	[more]
NES1_FRAVE	2.3e-07	34.48	(3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca PE=1 SV=1	[more]
MYRS_QUEIL	5.1e-07	32.67	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	[more]

BLAST of Csa1G070080.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX82_CUCSA	9.7e-122	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G070080 PE=3 SV=1	[more]
A0A0A0LUC8_CUCSA	1.1e-16	43.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1	[more]
A0A0A0LUC8_CUCSA	1.8e+02	59.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1	[more]
A0A0A0LX78_CUCSA	2.9e-09	42.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1	[more]
A0A0A0LX78_CUCSA	2.3e+02	33.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1	[more]

BLAST of Csa1G070080.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25820.1	1.9e-07	30.08	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25830.1	1.9e-07	30.08	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25810.1	4.2e-07	33.33	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G61680.1	7.1e-07	33.85	terpene synthase 14	[more]
AT4G16730.1	2.1e-06	29.10	terpene synthase 02	[more]

BLAST of Csa1G070080.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658558\|ref\|XP_011652894.1\|	1.4e-121	100.00	PREDICTED: myrcene synthase, chloroplastic-like isoform X1 [Cucumis sativus]	[more]
gi\|778658562\|ref\|XP_011652895.1\|	7.2e-86	100.00	PREDICTED: probable terpene synthase 13 isoform X2 [Cucumis sativus]	[more]
gi\|659068831\|ref\|XP_008446523.1\|	7.5e-67	75.27	PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]	[more]
gi\|659068831\|ref\|XP_008446523.1\|	1.2e-03	95.65	PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]	[more]
gi\|700209493\|gb\|KGN64589.1\|	2.5e+02	59.09	hypothetical protein Csa_1G068570 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001906	Terpene_synth_N
IPR008930	Terpenoid_cyclase/PrenylTrfase

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G070080	Csa1G070080	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G070080.1	Csa1G070080.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G070080.1.cds2	Csa1G070080.1.cds2	CDS
Csa1G070080.1.cds1	Csa1G070080.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001906	Terpene synthase, N-terminal domain	GENE3D	G3DSA:1.50.30.10		coord: 82..161 score: 2.5
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 79..166 score: 1.5
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	unknown	SSF48239	Terpenoid cyclases/Protein prenyltransferases	coord: 79..175 score: 4.94
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 80..159 score: 1.8