Csa1G070080 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G070080
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein; contains IPR008930 (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid)
Location	Chr1 : 7042036 .. 7042800 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTTCAATCCTTTCTTGCTTCTCCCTGTCCAAAAATATTCATTTATCAAACAAAAAATCCACACAAAGTTCAGAATAACAACGCATGGCTTCAATTGAATGACCCTCTTGAAAAATCTTTTGCCAGAAAAGGGTGCATTCATGCCTTGAATTCTTCTTCATCATCCAATAAGTGCATCATCTCCAATTTGAAAATTGTATATTATCTTATTATTTTGGTCCATTGATTTTGTCTCCTTATGATTTCTCCTTTCATTTATTTATTTATTATTTTTTATGATGAGTCTTATAAATGATGATGTGTATAGGAGGAGTTTGGGGTTGAAACTCCAGCGAGAAAAGTGGAGATTTTAAAGGACATACTAACAGAAACAAGAGATGATCTGTGTTGGGAACGTTTGGAAATAATTGATGCAGCCCAATGGCTTGGCATTGACAACCAGTTCGAAGAAGAGATTGAAGATGTTCTTAAGAGGCAATATGATTTGATAAATGCATATCGTTTTGATGGAGACATGGATCTTCACAAAGCTGCCCTCCTTTTTCGACTTTTGAGACAACAACGATACCTTATATCTCAAGGTTCATATTCCACACTCTTTACCAACGAATTAAGCTTGAAGGTCTATAAGAAACATGGTTGGAATCCCATTGGTTCCTTGAGAAAAACGGTATTTTTTGTTAGATCCAAATTTAGCATTTTGGAAACCAAACGGATTAACAAATGCTATATGACAGGGAAGTACTTACAAAAACATTAA

mRNA sequence

ATGTATCTTCAATCCTTTCTTGCTTCTCCCTGTCCAAAAATATTCATTTATCAAACAAAAAATCCACACAAAGTTCAGAATAACAACGCATGGCTTCAATTGAATGACCCTCTTGAAAAATCTTTTGCCAGAAAAGGGTGCATTCATGCCTTGAATTCTTCTTCATCATCCAATAAGTGCATCATCTCCAATTTGAAAATTGAGGAGTTTGGGGTTGAAACTCCAGCGAGAAAAGTGGAGATTTTAAAGGACATACTAACAGAAACAAGAGATGATCTGTGTTGGGAACGTTTGGAAATAATTGATGCAGCCCAATGGCTTGGCATTGACAACCAGTTCGAAGAAGAGATTGAAGATGTTCTTAAGAGGCAATATGATTTGATAAATGCATATCGTTTTGATGGAGACATGGATCTTCACAAAGCTGCCCTCCTTTTTCGACTTTTGAGACAACAACGATACCTTATATCTCAAGGTTCATATTCCACACTCTTTACCAACGAATTAAGCTTGAAGGTCTATAAGAAACATGGTTGGAATCCCATTGGTTCCTTGAGAAAAACGGTATTTTTTGTTAGATCCAAATTTAGCATTTTGGAAACCAAACGGATTAACAAATGCTATATGACAGGGAAGTACTTACAAAAACATTAA

Coding sequence (CDS)

ATGTATCTTCAATCCTTTCTTGCTTCTCCCTGTCCAAAAATATTCATTTATCAAACAAAAAATCCACACAAAGTTCAGAATAACAACGCATGGCTTCAATTGAATGACCCTCTTGAAAAATCTTTTGCCAGAAAAGGGTGCATTCATGCCTTGAATTCTTCTTCATCATCCAATAAGTGCATCATCTCCAATTTGAAAATTGAGGAGTTTGGGGTTGAAACTCCAGCGAGAAAAGTGGAGATTTTAAAGGACATACTAACAGAAACAAGAGATGATCTGTGTTGGGAACGTTTGGAAATAATTGATGCAGCCCAATGGCTTGGCATTGACAACCAGTTCGAAGAAGAGATTGAAGATGTTCTTAAGAGGCAATATGATTTGATAAATGCATATCGTTTTGATGGAGACATGGATCTTCACAAAGCTGCCCTCCTTTTTCGACTTTTGAGACAACAACGATACCTTATATCTCAAGGTTCATATTCCACACTCTTTACCAACGAATTAAGCTTGAAGGTCTATAAGAAACATGGTTGGAATCCCATTGGTTCCTTGAGAAAAACGGTATTTTTTGTTAGATCCAAATTTAGCATTTTGGAAACCAAACGGATTAACAAATGCTATATGACAGGGAAGTACTTACAAAAACATTAA

Protein sequence

MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKCIISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWNPIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH*

Homology

[Close]

BLAST of Csa1G070080 vs. Swiss-Prot
Match: TPS13_RICCO (Probable terpene synthase 13 OS=Ricinus communis GN=TPS13 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-09
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 1


Query: 56  SSNKCIISNLKIE-----EFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGID 115
           S N+ ++S L  +     +  V    R+    K IL +  +    E L +IDA Q LGID
Sbjct: 43  SINQTLVSPLSAQCIHLTDEDVRIKERRTRAFKHILRKEGEG-SHEVLAMIDAIQRLGID 102

Query: 116 NQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSY 162
           + F++EI+++L+RQY + + Y    D DLH  AL FRLLRQ  Y +S G +
Sbjct: 103 HHFQDEIDEILQRQYTIPSYY---NDNDLHGLALRFRLLRQGGYNVSAGVF 149

HSP 2 Score: 42.0 bits (97), Expect = 1.0e-02
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRKT 189
           TNE+  KVYK+HGWNP+ SLR+T
Sbjct: 371 TNEIGYKVYKQHGWNPVHSLRET 393

[Close]

BLAST of Csa1G070080 vs. Swiss-Prot
Match: NES1_FRAAN ((3S,6E)-nerolidol synthase 1 OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.3e-09
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDG 135
           ++K+E+LK +L    +    E L +IDA Q LGID  F+ EI+++L +Q  +++A     
Sbjct: 19  SQKLELLKTVLRNVAELDALEGLNMIDAVQRLGIDYNFQREIDEILHKQMSIVSARD--- 78

Query: 136 DMDLHKAALLFRLLRQQRYLISQGSYS 163
             DLH+ AL FRLLRQ  Y + +  ++
Sbjct: 79  --DLHEVALRFRLLRQHGYFVPEDVFN 100

HSP 2 Score: 37.4 bits (85), Expect = 2.5e-01
Identity = 15/21 (71.43%), Postives = 15/21 (71.43%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLR 187
           TNE S KVY KHGWNP+ SL+
Sbjct: 318 TNEFSSKVYLKHGWNPLQSLK 338

[Close]

BLAST of Csa1G070080 vs. Swiss-Prot
Match: NES2_FRAAN ((3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 77  RKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGD 136
           +K+E+ +++L    +    E L +IDA Q LGID  F+ EI+++L +Q   ++A      
Sbjct: 79  QKLELFRNVLRNVAELDALEGLNMIDAVQRLGIDFHFQREIDEILHKQMSNVSA-----S 138

Query: 137 MDLHKAALLFRLLRQQRYLISQGSYS 163
            DLH+ AL FRLLRQ  Y + +  ++
Sbjct: 139 DDLHEVALRFRLLRQHGYFVPEDVFN 159

HSP 2 Score: 39.7 bits (91), Expect = 4.9e-02
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLR 187
           TNE+S KVY+KHGWNP+ SL+
Sbjct: 377 TNEISCKVYQKHGWNPLQSLK 397

[Close]

BLAST of Csa1G070080 vs. Swiss-Prot
Match: NES1_FRAVE ((3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDG 135
           ++K+E+ +++L    +    E L +IDA Q LGID  F+ EI+++L +Q  +++A     
Sbjct: 80  SQKLELFRNVLRNAAELDALEGLNMIDAVQRLGIDYHFQREIDEILHKQMGIVSACD--- 139

Query: 136 DMDLHKAALLFRLLRQQRYLISQGSYS 163
             DL++ AL FRLLRQ  Y + +  ++
Sbjct: 140 --DLYEVALRFRLLRQHGYFVPEDVFN 161

HSP 2 Score: 38.9 bits (89), Expect = 8.4e-02
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLR 187
           TNE S KVY+KHGWNP+ SL+
Sbjct: 379 TNEFSCKVYQKHGWNPLRSLK 399

[Close]

BLAST of Csa1G070080 vs. Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-07
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 1


Query: 58  NKCIISNLKIEEFGVETPARKVEILKD----ILTETRDDLCWERLEIIDAAQWLGIDNQF 117
           N   I +L+IE  G ET  R++ +LK+    +L +  + L  E+LE+I+  Q LG+   F
Sbjct: 68  NHDYIESLRIEYVG-ETCTRQINVLKEQVRMMLHKVVNPL--EQLELIEILQRLGLSYHF 127

Query: 118 EEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKV 177
           EEEI+ +L   Y+  +        +L+  AL FRLLRQ  Y +SQ  +++      S K 
Sbjct: 128 EEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKA 187

Query: 178 YKKHGWNPIGSLRKTVFFVRSKFSILETKR 204
                   + SL +  FF+    +ILE  R
Sbjct: 188 CLCEDTKGMLSLYEASFFLIEGENILEEAR 214

[Close]

BLAST of Csa1G070080 vs. TrEMBL
Match: A0A0A0LX82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G070080 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 9.7e-122
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60
           MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC
Sbjct: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60

Query: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120
           IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV
Sbjct: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120

Query: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180
           LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN
Sbjct: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180

Query: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 218
           PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH
Sbjct: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 217

[Close]

BLAST of Csa1G070080 vs. TrEMBL
Match: A0A0A0LUC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-16
Identity = 68/155 (43.87%), Postives = 85/155 (54.84%), Query Frame = 1


Query: 26  QNNNAWLQLNDPLEKSFARKGCIHALNSS------SSSNKCIISNLKIEEFGVE--TPAR 85
           QNNN    +N+PL          H+L S+      S     I+SN      G+E    A 
Sbjct: 20  QNNNFNPIINNPLLNKQIIYLPHHSLLSTPLKPFDSKIQPSILSN------GIEYGEAAI 79

Query: 86  KVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDM 145
           K  ILKD+L E  D   WE L +IDA Q LGID  F+EEIE VL+RQY L NA +++ D 
Sbjct: 80  KGRILKDVLREIGDP--WECLNLIDATQRLGIDYHFQEEIEAVLQRQYVLFNAIQYNPDT 139

Query: 146 DLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
           DLHKAALLFRL RQQ YL+S   + +    +   K
Sbjct: 140 DLHKAALLFRLFRQQGYLVSADVFKSFMDKKGKFK 166

[Close]

BLAST of Csa1G070080 vs. TrEMBL
Match: A0A0A0LUC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1)

HSP 1 Score: 34.7 bits (78), Expect = 1.8e+02
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRK 188
           TNE+   +Y+KHGWNPI  L K
Sbjct: 373 TNEICYHIYQKHGWNPIHFLHK 394

HSP 2 Score: 72.8 bits (177), Expect = 5.9e-10
Identity = 56/169 (33.14%), Postives = 84/169 (49.70%), Query Frame = 1


Query: 6   FLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKCIISNL 65
           F+     K+      N + +  NN    +ND +  S   K   +    SS+ N     ++
Sbjct: 17  FIPKHISKVGNRNLNNINSLLPNNKKGSINDNIGVSARLKRFTYPSEHSSNFN----DDI 76

Query: 66  KIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQY 125
            I+       A+K+E++K IL +  DD  +E L +ID  Q LGID  F++EIE +L+RQY
Sbjct: 77  HIKH------AKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQY 136

Query: 126 DLINAYRFDGDM--DLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
            +   +  DGD   DL + AL FRLLRQQ Y +S   ++     E   K
Sbjct: 137 SI---FFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFK 172

[Close]

BLAST of Csa1G070080 vs. TrEMBL
Match: A0A0A0LX78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-09
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1


Query: 78  KVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYR-FDGD 137
           +++ILK +L+ET  +   E L +ID  Q LGID+ F+EEIE +LK QY ++  +  FD  
Sbjct: 94  EMKILKHLLSETAKNGSLEVLNMIDGIQRLGIDHCFKEEIEAILKEQYTIMATHHYFDTK 153

Query: 138 MDLHKAALLFRLLRQQRYLISQGSYS--TLFTNELSLKVYK 176
             LH+ AL FRLLRQ  Y I    +   T    EL+ KV++
Sbjct: 154 CSLHEVALRFRLLRQHGYFIPSDVFESFTAKNGELNKKVFE 194

[Close]

BLAST of Csa1G070080 vs. TrEMBL
Match: A0A0A0LX78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1)

HSP 1 Score: 34.3 bits (77), Expect = 2.3e+02
Identity = 31/92 (33.70%), Postives = 43/92 (46.74%), Query Frame = 1


Query: 110 DNQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQ--QRYLIS---------Q 169
           D +F EE  ++ K    +   Y  D   DL+ +    RL  Q  QR+ +          +
Sbjct: 330 DPKFSEERVELTK---SISFIYLLDDIYDLYGSIEELRLFTQAIQRWNLEAINSLPHPMK 389

Query: 170 GSYSTLF--TNELSLKVYKKHGWNPIGSLRKT 189
             Y  L+  TNELS K   KHGWNPI  L+K+
Sbjct: 390 FCYIKLYETTNELSHKFSLKHGWNPIHCLQKS 418

HSP 2 Score: 69.7 bits (169), Expect = 5.0e-09
Identity = 41/113 (36.28%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLI---NAYR 135
           ARK+++ + +L++  ++   E L +IDA Q LGID+ F+EEI+ +L++Q+ +I   +A+ 
Sbjct: 71  ARKLDVFRHVLSKLGEEAV-EGLNMIDAVQRLGIDHHFQEEIDQILQKQHLIITSGSAHG 130

Query: 136 FDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWNPIGSL 186
            D   DLH+ A+ FRLLRQQ Y +    ++    +E S K     G   + SL
Sbjct: 131 ADHHSDLHEVAVRFRLLRQQGYFVPDDVFNKFKESEGSFKKMLSEGIQGLMSL 182

[Close]

BLAST of Csa1G070080 vs. TAIR10
Match: AT3G25820.1 (AT3G25820.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 58  NKCIISNLKIEEFGVETPARKVEILKDILTETRDD---LCWERLEIIDAAQWLGIDNQFE 117
           N C + +++  ++  ET     ++LK  +    DD      E+LE+ID  Q LG+   FE
Sbjct: 58  NHCYLLSIE-NKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFE 117

Query: 118 EEIEDVLKRQYDLI--NAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 177
            EI D L   +  +  N ++ D + DLH  +L FRLLRQ  + +S+  +  +  +++   
Sbjct: 118 IEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVII-DQIESN 177

Query: 178 VYKKHGWNPIGSL 186
            +K +  N I SL
Sbjct: 178 TFKTNNINGIISL 188

[Close]

BLAST of Csa1G070080 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 58  NKCIISNLKIEEFGVETPARKVEILKDILTETRDD---LCWERLEIIDAAQWLGIDNQFE 117
           N C + +++  ++  ET     ++LK  +    DD      E+LE+ID  Q LG+   FE
Sbjct: 58  NHCYLLSIE-NKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFE 117

Query: 118 EEIEDVLKRQYDLI--NAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 177
            EI D L   +  +  N ++ D + DLH  +L FRLLRQ  + +S+  +  +  +++   
Sbjct: 118 IEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVII-DQIESN 177

Query: 178 VYKKHGWNPIGSL 186
            +K +  N I SL
Sbjct: 178 TFKTNNINGIISL 188

[Close]

BLAST of Csa1G070080 vs. TAIR10
Match: AT3G25810.1 (AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07
Identity = 35/105 (33.33%), Postives = 53/105 (50.48%), Query Frame = 1


Query: 62  ISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVL 121
           I N  + E  V T     + +K +L E       E+LE+ID  Q LG+   FE+EI ++L
Sbjct: 65  IENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNIL 124

Query: 122 KRQY--DLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTL 165
              +  +  N ++ D + DLH  AL FRLLRQ  + +S+  +  +
Sbjct: 125 TNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVI 169

[Close]

BLAST of Csa1G070080 vs. TAIR10
Match: AT1G61680.1 (AT1G61680.1 terpene synthase 14)

HSP 1 Score: 51.6 bits (122), Expect = 7.1e-07
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 1


Query: 43  ARKGCIHALNSSSSSNKCIISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIID 102
           A++  +  +++S S+      N    E+  E   +K+   K+IL+    D+  E LE+ID
Sbjct: 43  AKRSILRNVHASVSNPSKQFHNKTSLEYLHELNIKKI---KNILS-ANVDVPSENLEMID 102

Query: 103 AAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYS 162
             Q LGID  F +EIE  L   Y      +F+G  DLH+ AL FRLLRQ+ + + +    
Sbjct: 103 VIQSLGIDLHFRQEIEQTLHMIYK--EGLQFNG--DLHEIALRFRLLRQEGHYVQE---- 160

Query: 163 TLFTNELSLK 173
            +F N L  K
Sbjct: 163 IIFKNILDKK 160

HSP 2 Score: 40.4 bits (93), Expect = 1.6e-03
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = 1


Query: 164 LFTNELSLKVYKKHGWNPIGSLRKTVFFVRSKFSILETKRINKCYM--TGKYLQ 216
           + T E+S+K+YK HGWNP  +LR++   +   F ++E K  N  Y+  T +Y++
Sbjct: 374 MITTEISMKIYKSHGWNPTYALRQSWASLCKAF-LVEAKWFNSGYLPTTEEYMK 426

[Close]

BLAST of Csa1G070080 vs. TAIR10
Match: AT4G16730.1 (AT4G16730.1 terpene synthase 02)

HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06
Identity = 39/134 (29.10%), Postives = 68/134 (50.75%), Query Frame = 1


Query: 72  VETPARKVEILKDILTETRDDL--CWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLIN 131
           VET A K  + K+ + +T +++    E+LE+ID+ Q LGI   ++ EI D+L++ +D   
Sbjct: 18  VET-AEKAILFKEEVRKTLNEIEGSIEQLEMIDSLQRLGISYHYKHEIHDILRKIHDQHG 77

Query: 132 AYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWNPIGSLRKTV 191
               +   DLH  +L F LLRQ  + +SQ ++    +     +         + SL +  
Sbjct: 78  EIERE-TQDLHATSLEFILLRQHGFDVSQDAFDVFISETGEFRKTLHSDIKGLLSLYEAS 137

Query: 192 FF-VRSKFSILETK 203
           +F + S+F + ET+
Sbjct: 138 YFSMDSEFKLKETR 149

[Close]

BLAST of Csa1G070080 vs. NCBI nr
Match: gi|778658558|ref|XP_011652894.1| (PREDICTED: myrcene synthase, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-121
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60
           MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC
Sbjct: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60

Query: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120
           IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV
Sbjct: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120

Query: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180
           LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN
Sbjct: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGWN 180

Query: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 218
           PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH
Sbjct: 181 PIGSLRKTVFFVRSKFSILETKRINKCYMTGKYLQKH 217

[Close]

BLAST of Csa1G070080 vs. NCBI nr
Match: gi|778658562|ref|XP_011652895.1| (PREDICTED: probable terpene synthase 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 7.2e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60
           MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC
Sbjct: 1   MYLQSFLASPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNKC 60

Query: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120
           IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV
Sbjct: 61  IISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDV 120

Query: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQG 160
           LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQG
Sbjct: 121 LKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQG 159

[Close]

BLAST of Csa1G070080 vs. NCBI nr
Match: gi|659068831|ref|XP_008446523.1| (PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 7.5e-67
Identity = 140/186 (75.27%), Postives = 151/186 (81.18%), Query Frame = 1


Query: 1   MYLQSFLA-SPCPKIFIYQTKNPHKVQNNNAWLQLNDPLEKSFARKGCIHALNSSSSSNK 60
           +YLQSFLA  P PKIFI QTK PHK  NNNAWLQLN+PLEKSFA KG IHALNSSSSSNK
Sbjct: 5   IYLQSFLAFPPRPKIFISQTKIPHKAHNNNAWLQLNNPLEKSFAEKGFIHALNSSSSSNK 64

Query: 61  CIISNLKIEEFGVETPARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIED 120
            IIS+LKIEE GVETPARKV+ILK++LTETRDDLC E LEIIDAAQ LGIDNQFEEEIED
Sbjct: 65  IIISDLKIEELGVETPARKVKILKELLTETRDDLCLECLEIIDAAQRLGIDNQFEEEIED 124

Query: 121 VLKRQYDLINAYRFDGDMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLKVYKKHGW 180
           VLKRQY LINAY FDGD+DLHKAALLFRLLRQQRYL+SQ  +      +   K   K   
Sbjct: 125 VLKRQYALINAYHFDGDVDLHKAALLFRLLRQQRYLVSQDVFKVFLNEKGKFKEKLKADL 184

Query: 181 NPIGSL 186
           N + SL
Sbjct: 185 NGMTSL 190

[Close]

BLAST of Csa1G070080 vs. NCBI nr
Match: gi|659068831|ref|XP_008446523.1| (PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-03
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRKT 189
           TNELSLKVYKKHGWNP+GSLRKT
Sbjct: 393 TNELSLKVYKKHGWNPVGSLRKT 415

HSP 2 Score: 95.1 bits (235), Expect = 1.6e-16
Identity = 68/155 (43.87%), Postives = 85/155 (54.84%), Query Frame = 1


Query: 26  QNNNAWLQLNDPLEKSFARKGCIHALNSS------SSSNKCIISNLKIEEFGVE--TPAR 85
           QNNN    +N+PL          H+L S+      S     I+SN      G+E    A 
Sbjct: 20  QNNNFNPIINNPLLNKQIIYLPHHSLLSTPLKPFDSKIQPSILSN------GIEYGEAAI 79

Query: 86  KVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDGDM 145
           K  ILKD+L E  D   WE L +IDA Q LGID  F+EEIE VL+RQY L NA +++ D 
Sbjct: 80  KGRILKDVLREIGDP--WECLNLIDATQRLGIDYHFQEEIEAVLQRQYVLFNAIQYNPDT 139

Query: 146 DLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
           DLHKAALLFRL RQQ YL+S   + +    +   K
Sbjct: 140 DLHKAALLFRLFRQQGYLVSADVFKSFMDKKGKFK 166

[Close]

BLAST of Csa1G070080 vs. NCBI nr
Match: gi|700209493|gb|KGN64589.1| (hypothetical protein Csa_1G068570 [Cucumis sativus])

HSP 1 Score: 34.7 bits (78), Expect = 2.5e+02
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 166 TNELSLKVYKKHGWNPIGSLRK 188
           TNE+   +Y+KHGWNPI  L K
Sbjct: 373 TNEICYHIYQKHGWNPIHFLHK 394

HSP 2 Score: 93.2 bits (230), Expect = 6.0e-16
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 1


Query: 76  ARKVEILKDILTETRDDLCWERLEIIDAAQWLGIDNQFEEEIEDVLKRQYDLINAYRFDG 135
           A K  ILKD+L E  D   WE L +IDA Q LGID  F+EEIE VL+RQY L NA +++ 
Sbjct: 60  AIKGRILKDVLREIGDP--WECLNLIDATQRLGIDYHFQEEIEAVLQRQYVLFNAIQYNP 119

Query: 136 DMDLHKAALLFRLLRQQRYLISQGSYSTLFTNELSLK 173
           D DLHKAALLFRL RQQ YL+S   + +    +   K
Sbjct: 120 DTDLHKAALLFRLFRQQGYLVSADVFKSFMDKKGKFK 154

The following BLAST results are available for this feature:

BLAST of Csa1G070080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPS13_RICCO	5.5e-09	37.84	Probable terpene synthase 13 OS=Ricinus communis GN=TPS13 PE=3 SV=1	[more]
NES1_FRAAN	9.3e-09	37.93	(3S,6E)-nerolidol synthase 1 OS=Fragaria ananassa PE=1 SV=1	[more]
NES2_FRAAN	1.8e-07	36.05	(3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial OS=Fragaria ananassa P...	[more]
NES1_FRAVE	2.3e-07	34.48	(3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca PE=1 SV=1	[more]
MYRS_QUEIL	5.1e-07	32.67	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	[more]

BLAST of Csa1G070080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX82_CUCSA	9.7e-122	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G070080 PE=3 SV=1	[more]
A0A0A0LUC8_CUCSA	1.1e-16	43.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1	[more]
A0A0A0LUC8_CUCSA	1.8e+02	59.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G068570 PE=3 SV=1	[more]
A0A0A0LX78_CUCSA	2.9e-09	42.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1	[more]
A0A0A0LX78_CUCSA	2.3e+02	33.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066550 PE=3 SV=1	[more]

BLAST of Csa1G070080 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25820.1	1.9e-07	30.08	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25830.1	1.9e-07	30.08	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25810.1	4.2e-07	33.33	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G61680.1	7.1e-07	33.85	terpene synthase 14	[more]
AT4G16730.1	2.1e-06	29.10	terpene synthase 02	[more]

BLAST of Csa1G070080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658558\|ref\|XP_011652894.1\|	1.4e-121	100.00	PREDICTED: myrcene synthase, chloroplastic-like isoform X1 [Cucumis sativus]	[more]
gi\|778658562\|ref\|XP_011652895.1\|	7.2e-86	100.00	PREDICTED: probable terpene synthase 13 isoform X2 [Cucumis sativus]	[more]
gi\|659068831\|ref\|XP_008446523.1\|	7.5e-67	75.27	PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]	[more]
gi\|659068831\|ref\|XP_008446523.1\|	1.2e-03	95.65	PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]	[more]
gi\|700209493\|gb\|KGN64589.1\|	2.5e+02	59.09	hypothetical protein Csa_1G068570 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001906	Terpene_synth_N
IPR008930	Terpenoid_cyclase/PrenylTrfase

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0016829	lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G070080.1	Csa1G070080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001906	Terpene synthase, N-terminal domain	GENE3D	G3DSA:1.50.30.10		coord: 82..161 score: 2.5
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 79..166 score: 1.5
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	unknown	SSF48239	Terpenoid cyclases/Protein prenyltransferases	coord: 79..175 score: 4.94
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 80..159 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G070080	ClCG03G005230	Watermelon (Charleston Gray)	cuwcgB035
Csa1G070080	Lsi02G006690	Bottle gourd (USVL1VR-Ls)	culsiB022

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G070080	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G070080	Cucurbita pepo (Zucchini)	cpecuB203
Csa1G070080	Cucurbita pepo (Zucchini)	cpecuB474
Csa1G070080	Cucurbita pepo (Zucchini)	cpecuB506
Csa1G070080	Cucurbita pepo (Zucchini)	cpecuB770
Csa1G070080	Bottle gourd (USVL1VR-Ls)	culsiB012
Csa1G070080	Bottle gourd (USVL1VR-Ls)	culsiB019
Csa1G070080	Bottle gourd (USVL1VR-Ls)	culsiB050
Csa1G070080	Cucumber (Gy14) v2	cgybcuB001
Csa1G070080	Cucumber (Gy14) v2	cgybcuB095
Csa1G070080	Cucumber (Gy14) v2	cgybcuB239
Csa1G070080	Melon (DHL92) v3.6.1	cumedB022
Csa1G070080	Melon (DHL92) v3.6.1	cumedB072
Csa1G070080	Melon (DHL92) v3.6.1	cumedB077
Csa1G070080	Silver-seed gourd	carcuB0661
Csa1G070080	Silver-seed gourd	carcuB0814
Csa1G070080	Silver-seed gourd	carcuB0888
Csa1G070080	Silver-seed gourd	carcuB0916
Csa1G070080	Silver-seed gourd	carcuB0945
Csa1G070080	Silver-seed gourd	carcuB1020
Csa1G070080	Watermelon (97103) v2	cuwmbB000
Csa1G070080	Watermelon (97103) v2	cuwmbB016
Csa1G070080	Watermelon (97103) v2	cuwmbB029
Csa1G070080	Watermelon (97103) v2	cuwmbB032
Csa1G070080	Wax gourd	cuwgoB023
Csa1G070080	Wax gourd	cuwgoB044
Csa1G070080	Wax gourd	cuwgoB051
Csa1G070080	Cucumber (Chinese Long) v2	cucuB015
Csa1G070080	Cucumber (Chinese Long) v2	cucuB035
Csa1G070080	Cucumber (Chinese Long) v2	cucuB044
Csa1G070080	Cucumber (Gy14) v1	cgycuB070
Csa1G070080	Cucumber (Gy14) v1	cgycuB015
Csa1G070080	Cucurbita maxima (Rimu)	cmacuB010
Csa1G070080	Cucurbita maxima (Rimu)	cmacuB218
Csa1G070080	Cucurbita maxima (Rimu)	cmacuB318
Csa1G070080	Cucurbita maxima (Rimu)	cmacuB391
Csa1G070080	Cucurbita maxima (Rimu)	cmacuB649
Csa1G070080	Cucurbita maxima (Rimu)	cmacuB848
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB000
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB203
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB380
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB419
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB491
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB637
Csa1G070080	Cucurbita moschata (Rifu)	cmocuB835
Csa1G070080	Melon (DHL92) v3.5.1	cumeB027
Csa1G070080	Melon (DHL92) v3.5.1	cumeB040
Csa1G070080	Melon (DHL92) v3.5.1	cumeB077
Csa1G070080	Melon (DHL92) v3.5.1	cumeB083
Csa1G070080	Watermelon (Charleston Gray)	cuwcgB012
Csa1G070080	Watermelon (Charleston Gray)	cuwcgB032
Csa1G070080	Watermelon (97103) v1	cuwmB008
Csa1G070080	Watermelon (97103) v1	cuwmB043
Csa1G070080	Watermelon (97103) v1	cuwmB067