Csa1G004210.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G004210.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein; contains IPR005819 (Histone H5)
Location	Chr1 : 725100 .. 725525 (-)
Sequence length	363

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATGGTGACATAATTTAAAAGCTGATGAGACGATCTTAGCATTTCAATATAATATATAGTTTTTTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTAA

mRNA sequence

ATGTTGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTAA

Coding sequence (CDS)

ATGTTGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTAA

Protein sequence

MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN*

Homology

[Close]

BLAST of Csa1G004210.1 vs. Swiss-Prot
Match: Y5G8_ENCCU (UPF0329 protein ECU05_1680/ECU11_0050 OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU05_1680 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.5e-20
Identity = 44/111 (39.64%), Postives = 87/111 (78.38%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           M+KK+++KKK+++KKK+++K+K++KKKKK++KK++KKKKK++KK++KK++KK++KK++KK
Sbjct: 309 MEKKEEEKKKEEEKKKEEEKRKEEKKKKKEEKKEEKKKKKEEKKEEKKEEKKEEKKEEKK 368

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 114
           ++KK++KK++K  K  ++ +  ++ +    +    ++K  KK +  +K+ K
Sbjct: 369 EEKKEEKKEEKSGKSLREGEASEEAEMPSVEVGGARRKTGKKSEGGRKRYK 419

[Close]

BLAST of Csa1G004210.1 vs. Swiss-Prot
Match: NST1_CANGA (Stress response protein NST1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NST1 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-18
Identity = 33/117 (28.21%), Postives = 99/117 (84.62%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MKKK+K+ KK KKK+K+K+K++ ++  K+++K+KK+++++  ++++++++ ++++ ++KK
Sbjct: 656 MKKKEKEVKKIKKKEKEKEKRRLQQLAKEEEKRKKEEEERSAREEQERREMERREAQRKK 715

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
            ++ K+KK +++++K ++++K++++++K++K K+++K+K++++KKKK++ +++ +++
Sbjct: 716 VEEAKRKKDEERRRKLEEQRKREEQQEKQRKAKEEQKRKREEEKKKKEELERQLREE 772

[Close]

BLAST of Csa1G004210.1 vs. Swiss-Prot
Match: GARP_PLAFF (Glutamic acid-rich protein OS=Plasmodium falciparum (isolate FC27 / Papua New Guinea) GN=GARP PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.7e-18
Identity = 49/150 (32.67%), Postives = 95/150 (63.33%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MK+++K +KKKKK+++K+KKK++K++KK++KK++K+K+K+ KK+KK +K++KKK++K+KK
Sbjct: 272 MKEQEKIEKKKKKQEEKEKKKQEKERKKQEKKERKQKEKEMKKQKKIEKERKKKEEKEKK 331

Query: 63  KKKKKKKK--------------------------------KKKKKKKKKKKKKKKKKKKK 121
           KKK  K+                                 ++ K+ + K+++ K+ + K+
Sbjct: 332 KKKHDKENEETMQQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKEGEHKEEEHKEGEHKE 391

[Close]

BLAST of Csa1G004210.1 vs. Swiss-Prot
Match: NST1_KLULA (Stress response protein NST1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NST1 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 35/117 (29.91%), Postives = 96/117 (82.05%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           +LM+ + ++ +KK+K+KKK KKK+K+K+KK++++  K+++KK++++++ + KK+ ++K+ 
Sbjct: 689 LLMELEAEENQKKEKEKKKLKKKEKEKEKKRQQQLAKEEEKKRQEEEEIRLKKEAEEKEI 748

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 118
            +++ ++KK ++ K+K  +K+KKK  +++++++++++ +K+K+++K+++++++K+KK
Sbjct: 749 ARREAQRKKVEEAKRKNDEKRKKKLAEQRRREEEQERIRKEKEEQKRQREEEQKQKK 805

[Close]

BLAST of Csa1G004210.1 vs. Swiss-Prot
Match: NST1_DEBHA (Stress response protein NST1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NST1 PE=3 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 36/117 (30.77%), Postives = 94/117 (80.34%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MKK ++K+K K+KK+ ++  K+++++KK++++K K+++ K+K++  + ++++KK++ K+K
Sbjct: 671 MKKLRQKEKAKEKKRLQQLAKEEERRKKEEEQKAKEEELKQKQEALRAEQRRKKEEAKQK 730

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           ++++K+K+ ++ K+K+ + +K+ + ++KK+++ KK K +KKKK ++++K+K+++K++
Sbjct: 731 REEEKRKRIEELKRKELEHQKRLEAQRKKEEETKKLKDEKKKKIEEERKQKEEEKRQ 787

[Close]

BLAST of Csa1G004210.1 vs. TrEMBL
Match: A0A0A0LRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004210 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.9e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN
Sbjct: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 120

[Close]

BLAST of Csa1G004210.1 vs. TrEMBL
Match: A0A085M3T2_9BILA (Uncharacterized protein (Fragment) OS=Trichuris suis GN=M513_07207 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.5e-58
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M+MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 30  MMMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 89

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 90  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 148

[Close]

BLAST of Csa1G004210.1 vs. TrEMBL
Match: A0A0A0K9J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092520 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.5e-58
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M++KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 15  MILKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 74

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 75  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 133

[Close]

BLAST of Csa1G004210.1 vs. TrEMBL
Match: A0A0A0K9J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092520 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.7e-55
Identity = 115/124 (92.74%), Postives = 117/124 (94.35%), Query Frame = 1


Query: 3   MKKKKKKKKK-------KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           M+KK+KKKKK       KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 1   MRKKRKKKKKIMMMMILKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120

HSP 2 Score: 231.1 bits (588), Expect = 7.2e-58
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 260 MKMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 319

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 320 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 378

[Close]

BLAST of Csa1G004210.1 vs. TrEMBL
Match: A0A091DRC2_FUKDA (Uncharacterized protein OS=Fukomys damarensis GN=H920_13292 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-57
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M+ KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 27  MIKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 86

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 87  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 145

[Close]

BLAST of Csa1G004210.1 vs. TAIR10
Match: AT3G28770.1 (AT3G28770.1 Protein of unknown function (DUF1216))

HSP 1 Score: 95.5 bits (236), Expect = 2.4e-20
Identity = 46/117 (39.32%), Postives = 77/117 (65.81%), Query Frame = 1


Query: 3    MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
            MKK++ KK+KKK ++ K +KK++ KK  +K + +   KKK+ K +KKK +  K  KK+  
Sbjct: 1093 MKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESD 1152

Query: 63   KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
            KK+KK+ ++K + K+ +  K +K +  KK+KK  K ++KKK+K+ K+ ++KK KK +
Sbjct: 1153 KKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNE 1209

HSP 2 Score: 93.6 bits (231), Expect = 9.0e-20
Identity = 43/118 (36.44%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 3    MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
            MKKK++ KK+    + KK++  KK+  K +  K K++ K  K+KK+ +    K ++KK+ 
Sbjct: 956  MKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEY 1015

Query: 63   KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 121
            ++KK K K++ KK+KKK + KK+++K  +++K KK+K++ +  K KKK+++ K+KK++
Sbjct: 1016 EEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKES 1073

HSP 3 Score: 92.4 bits (228), Expect = 2.0e-19
Identity = 47/121 (38.84%), Postives = 78/121 (64.46%), Query Frame = 1


Query: 3    MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
            M+K + +   KKK+ K +KKK +  K  KK+  KK+KK+ ++K + K+ +  K +K +  
Sbjct: 1120 MEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVD 1179

Query: 63   KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK---KKKKKKKKKKKKKKKKKKKKK 121
            KK+KK  K ++KKK+K+ K+ ++KK KK ++ +KK+   ++ KK+K+ KK+K K K  KK
Sbjct: 1180 KKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKK 1239

[Close]

BLAST of Csa1G004210.1 vs. TAIR10
Match: AT1G56660.1 (AT1G56660.1 unknown protein)

HSP 1 Score: 88.6 bits (218), Expect = 2.9e-18
Identity = 56/144 (38.89%), Postives = 79/144 (54.86%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MK+K  KK KKK+K +   ++KKKK  K+KK+K +  +K+ KK K KK K +K +K+ + 
Sbjct: 242 MKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEG 301

Query: 63  KKKK-------------------KKKKKKKKKKKKK-------KKKKKKKKKKKKKKKKK 121
           KK K                   KKKK K K KKK+       +K+ K K   + + K+K
Sbjct: 302 KKTKEHDATEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQK 361

[Close]

BLAST of Csa1G004210.1 vs. TAIR10
Match: AT5G40340.1 (AT5G40340.1 Tudor/PWWP/MBT superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.5e-17
Identity = 42/128 (32.81%), Postives = 80/128 (62.50%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MKK++K+KK + KK+  + ++ +K+  +  KK++K+KK + KK+   +++ +K+  +  K
Sbjct: 728 MKKERKRKKSESKKEGGEGEETQKEANESTKKERKRKKSESKKQSDGEEETQKEPSESTK 787

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK-----------KKKKKKKKK 120
           K++K+K  + KKK +  ++++ +K+  +  KK++K+KK K           K +KKKKKK
Sbjct: 788 KERKRKNPESKKKAEAVEEEETRKESVESTKKERKRKKPKHDEEEVPNETEKPEKKKKKK 847

[Close]

BLAST of Csa1G004210.1 vs. TAIR10
Match: AT5G55820.1 (AT5G55820.1 Inner centromere protein, ARK-binding region (InterPro:IPR005635))

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12
Identity = 30/116 (25.86%), Postives = 80/116 (68.97%), Query Frame = 1


Query: 3    MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
            MK ++ K++++  KK++ +KKKK++ +KKK+ +   K++ +KKKK++++K+K+ +   +K
Sbjct: 1546 MKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEEERKRKEFEMADRK 1605

Query: 63   KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 119
            ++++++ K+ K+ KK+++    ++++++  +K + +K+ K++    + K +K+ K+
Sbjct: 1606 RQREEEDKRLKEAKKRQRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKE 1661

HSP 2 Score: 48.1 bits (113), Expect = 4.3e-06
Identity = 21/117 (17.95%), Postives = 64/117 (54.70%), Query Frame = 1


Query: 3    MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
            M+KKKK++++K+K+ +   +K++++++ K+ K+ KK+++    ++++++  +K + +K+ 
Sbjct: 1585 MEKKKKEEERKRKEFEMADRKRQREEEDKRLKEAKKRQRIADFQRQQREADEKLQAEKEL 1644

Query: 63   KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
            K++    + K +K+ K+ +   +K ++   +    + K          +  ++   K
Sbjct: 1645 KRQAMDARIKAQKELKEDQNNAEKTRQANSRIPAVRSKSNSSDDTNASRSSRENDFK 1701

[Close]

BLAST of Csa1G004210.1 vs. TAIR10
Match: AT2G39320.1 (AT2G39320.1 Cysteine proteinases superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.5e-11
Identity = 29/61 (47.54%), Postives = 47/61 (77.05%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MK ++KK+ + KKK++++K++K  +K++KKK K+ KKK K+ KKK K +K+KK+KK+KK 
Sbjct: 121 MKLQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKDKEDKKKAKVQKEKKEKKEKKN 180

Query: 63  K 64
           +
Sbjct: 181 R 181

[Close]

BLAST of Csa1G004210.1 vs. NCBI nr
Match: gi|700208458|gb|KGN63554.1| (hypothetical protein Csa_1G004210 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 4.2e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN
Sbjct: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 120

[Close]

BLAST of Csa1G004210.1 vs. NCBI nr
Match: gi|669308377|gb|KFD51878.1| (hypothetical protein M513_07207, partial [Trichuris suis])

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-58
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M+MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 30  MMMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 89

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 90  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 148

[Close]

BLAST of Csa1G004210.1 vs. NCBI nr
Match: gi|700191226|gb|KGN46430.1| (hypothetical protein Csa_6G092520 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 7.9e-58
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M++KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 15  MILKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 74

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 75  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 133

[Close]

BLAST of Csa1G004210.1 vs. NCBI nr
Match: gi|700191226|gb|KGN46430.1| (hypothetical protein Csa_6G092520 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-54
Identity = 115/124 (92.74%), Postives = 117/124 (94.35%), Query Frame = 1


Query: 3   MKKKKKKKKK-------KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           M+KK+KKKKK       KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 1   MRKKRKKKKKIMMMMILKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120

HSP 2 Score: 230.3 bits (586), Expect = 1.8e-57
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 1


Query: 1   MLMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
           M+ KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 27  MIKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 86

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 87  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 145

[Close]

BLAST of Csa1G004210.1 vs. NCBI nr
Match: gi|632911274|gb|KDB11191.1| (hypothetical protein UV8b_7924 [Ustilaginoidea virens])

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-57
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 3   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
           MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 1   MKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60

Query: 63  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
           KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Sbjct: 61  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 117

The following BLAST results are available for this feature:

BLAST of Csa1G004210.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5G8_ENCCU	6.5e-20	39.64	UPF0329 protein ECU05_1680/ECU11_0050 OS=Encephalitozoon cuniculi (strain GB-M1)...	[more]
NST1_CANGA	2.1e-18	28.21	Stress response protein NST1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / J...	[more]
GARP_PLAFF	4.7e-18	32.67	Glutamic acid-rich protein OS=Plasmodium falciparum (isolate FC27 / Papua New Gu...	[more]
NST1_KLULA	1.0e-17	29.91	Stress response protein NST1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 235...	[more]
NST1_DEBHA	2.3e-17	30.77	Stress response protein NST1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 7...	[more]

BLAST of Csa1G004210.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRF1_CUCSA	2.9e-59	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004210 PE=4 SV=1	[more]
A0A085M3T2_9BILA	2.5e-58	99.16	Uncharacterized protein (Fragment) OS=Trichuris suis GN=M513_07207 PE=4 SV=1	[more]
A0A0A0K9J0_CUCSA	5.5e-58	98.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092520 PE=4 SV=1	[more]
A0A0A0K9J0_CUCSA	9.7e-55	92.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092520 PE=4 SV=1	[more]
A0A091DRC2_FUKDA	1.2e-57	98.32	Uncharacterized protein OS=Fukomys damarensis GN=H920_13292 PE=4 SV=1	[more]

BLAST of Csa1G004210.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G28770.1	2.4e-20	39.32	Protein of unknown function (DUF1216)	[more]
AT1G56660.1	2.9e-18	38.89	unknown protein	[more]
AT5G40340.1	2.5e-17	32.81	Tudor/PWWP/MBT superfamily protein	[more]
AT5G55820.1	4.1e-12	25.86	Inner centromere protein, ARK-binding region (InterPro:IPR005635)	[more]
AT2G39320.1	4.5e-11	47.54	Cysteine proteinases superfamily protein	[more]

BLAST of Csa1G004210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208458\|gb\|KGN63554.1\|	4.2e-59	100.00	hypothetical protein Csa_1G004210 [Cucumis sativus]	[more]
gi\|669308377\|gb\|KFD51878.1\|	3.5e-58	99.16	hypothetical protein M513_07207, partial [Trichuris suis]	[more]
gi\|700191226\|gb\|KGN46430.1\|	7.9e-58	98.32	hypothetical protein Csa_6G092520 [Cucumis sativus]	[more]
gi\|700191226\|gb\|KGN46430.1\|	1.4e-54	92.74	hypothetical protein Csa_6G092520 [Cucumis sativus]	[more]
gi\|632911274\|gb\|KDB11191.1\|	2.3e-57	100.00	hypothetical protein UV8b_7924 [Ustilaginoidea virens]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005819	Histone_H5

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G004210	Csa1G004210	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G004210.1	Csa1G004210.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G004210.1.cds2	Csa1G004210.1.cds2	CDS
Csa1G004210.1.cds1	Csa1G004210.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 4..18 score: 5.1E-7coord: 34..51 score: 5.1E-7coord: 56..75 score: 5.
None	No IPR available	unknown	Coil	Coil	coord: 2..120 scor