CsGy7G016120.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATGGCACCAAATGGTTTCAAGCTCTTTCACACCCTTTTCTTAGTGCTTGCTTGGCAATGCTGTGGGAAGGTGGGTGCCACCTTCGGTGACGTCACTGGTAGCGTAGAACCCGCTCTCGATCGTAAATTACCCATCCGTGCCTTTGGATCACACGGCACACAAGCATCAGCGGTCGCACCTGTGAGCAGTGTCGGTGGAAAAGTTCTTGTTGTTTCTCAAGGTCATGAAATTAGCACGGCAAAAAGTGCCGGTAGTGTTGTCGTTTCTCATGGTAGAAAAACTGGTCCGAACGCCAACCGCGGAAGTGTCGTTGCGATTTCTAGTGGTCATGAAATTAGCAAGAAGAGTGGTGCTAGTAGTGTTGTTGTTTCTCATGGTGGCAAAACCGGTGTGAACAACGGCAGTAGTAGTTTGGTTGCAGTTTCTCAAGGTCAAGAAATCACGAAGAAGGGTAGCAGCAGCATCATTGTTTCCCGTGGTTCCAAGACCGGTGTGAATGGAGGCAGTAGTACTGTTGCTGTATCTACCGGTCACGAAGTAAGTGCAAAGAGTGGCAGCAGTGTTGTCATTTCTCATAAAGGCAAAATCGGTGCCAACAGGGGGAGCAGGAGTGTCGTCGTGGCCAGCGGTCAGGAAACTAGAGTGAAGAGCGCCACCAGTACTGTTGTTTCTCATGGACATGGAGCTGCCATGATTCGTGGTGGTGCTGGTTTATTTTCTCATGGAATCCATACTAATCATAGAAGCAGCAAAAGCTTTTTTTCTTCTAACAATATCCAAACTACAAAGGGGGCTGATGGTATTCACACAAGTGGCAGCAGTAGCGTTGTTGTTCACACTCATCACCAAACTACAAGCACCGTTAGCGGTAGCGTTTTTTCTCATGGAGCTTTCAATGCTCAACATTAG ATGGAAATGGCACCAAATGGTTTCAAGCTCTTTCACACCCTTTTCTTAGTGCTTGCTTGGCAATGCTGTGGGAAGGTGGGTGCCACCTTCGGTGACGTCACTGGTAGCGTAGAACCCGCTCTCGATCGTAAATTACCCATCCGTGCCTTTGGATCACACGGCACACAAGCATCAGCGGTCGCACCTGTGAGCAGTGTCGGTGGAAAAGTTCTTGTTGTTTCTCAAGGTCATGAAATTAGCACGGCAAAAAGTGCCGGTAGTGTTGTCGTTTCTCATGGTAGAAAAACTGGTCCGAACGCCAACCGCGGAAGTGTCGTTGCGATTTCTAGTGGTCATGAAATTAGCAAGAAGAGTGGTGCTAGTAGTGTTGTTGTTTCTCATGGTGGCAAAACCGGTGTGAACAACGGCAGTAGTAGTTTGGTTGCAGTTTCTCAAGGTCAAGAAATCACGAAGAAGGGTAGCAGCAGCATCATTGTTTCCCGTGGTTCCAAGACCGGTGTGAATGGAGGCAGTAGTACTGTTGCTGTATCTACCGGTCACGAAGTAAGTGCAAAGAGTGGCAGCAGTGTTGTCATTTCTCATAAAGGCAAAATCGGTGCCAACAGGGGGAGCAGGAGTGTCGTCGTGGCCAGCGGTCAGGAAACTAGAGTGAAGAGCGCCACCAGTACTGTTGTTTCTCATGGACATGGAGCTGCCATGATTCGTGGTGGTGCTGGTTTATTTTCTCATGGAATCCATACTAATCATAGAAGCAGCAAAAGCTTTTTTTCTTCTAACAATATCCAAACTACAAAGGGGGCTGATGGTATTCACACAAGTGGCAGCAGTAGCGTTGTTGTTCACACTCATCACCAAACTACAAGCACCGTTAGCGGTAGCGTTTTTTCTCATGGAGCTTTCAATGCTCAACATTAG ATGGAAATGGCACCAAATGGTTTCAAGCTCTTTCACACCCTTTTCTTAGTGCTTGCTTGGCAATGCTGTGGGAAGGTGGGTGCCACCTTCGGTGACGTCACTGGTAGCGTAGAACCCGCTCTCGATCGTAAATTACCCATCCGTGCCTTTGGATCACACGGCACACAAGCATCAGCGGTCGCACCTGTGAGCAGTGTCGGTGGAAAAGTTCTTGTTGTTTCTCAAGGTCATGAAATTAGCACGGCAAAAAGTGCCGGTAGTGTTGTCGTTTCTCATGGTAGAAAAACTGGTCCGAACGCCAACCGCGGAAGTGTCGTTGCGATTTCTAGTGGTCATGAAATTAGCAAGAAGAGTGGTGCTAGTAGTGTTGTTGTTTCTCATGGTGGCAAAACCGGTGTGAACAACGGCAGTAGTAGTTTGGTTGCAGTTTCTCAAGGTCAAGAAATCACGAAGAAGGGTAGCAGCAGCATCATTGTTTCCCGTGGTTCCAAGACCGGTGTGAATGGAGGCAGTAGTACTGTTGCTGTATCTACCGGTCACGAAGTAAGTGCAAAGAGTGGCAGCAGTGTTGTCATTTCTCATAAAGGCAAAATCGGTGCCAACAGGGGGAGCAGGAGTGTCGTCGTGGCCAGCGGTCAGGAAACTAGAGTGAAGAGCGCCACCAGTACTGTTGTTTCTCATGGACATGGAGCTGCCATGATTCGTGGTGGTGCTGGTTTATTTTCTCATGGAATCCATACTAATCATAGAAGCAGCAAAAGCTTTTTTTCTTCTAACAATATCCAAACTACAAAGGGGGCTGATGGTATTCACACAAGTGGCAGCAGTAGCGTTGTTGTTCACACTCATCACCAAACTACAAGCACCGTTAGCGGTAGCGTTTTTTCTCATGGAGCTTTCAATGCTCAACATTAG MEMAPNGFKLFHTLFLVLAWQCCGKVGATFGDVTGSVEPALDRKLPIRAFGSHGTQASAVAPVSSVGGKVLVVSQGHEISTAKSAGSVVVSHGRKTGPNANRGSVVAISSGHEISKKSGASSVVVSHGGKTGVNNGSSSLVAVSQGQEITKKGSSSIIVSRGSKTGVNGGSSTVAVSTGHEVSAKSGSSVVISHKGKIGANRGSRSVVVASGQETRVKSATSTVVSHGHGAAMIRGGAGLFSHGIHTNHRSSKSFFSSNNIQTTKGADGIHTSGSSSVVVHTHHQTTSTVSGSVFSHGAFNAQH
BLAST of CsGy7G016120.1 vs. NCBI nr
Match: KGN44963.1 (Ankyrin repeat protein [Cucumis sativus]) HSP 1 Score: 296.2 bits (757), Expect = 1.3e-76 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. NCBI nr
Match: XP_023004882.1 (uncharacterized protein KIAA0754-like [Cucurbita maxima]) HSP 1 Score: 85.1 bits (209), Expect = 4.4e-13 Identity = 45/83 (54.22%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. NCBI nr
Match: XP_022975301.1 (uncharacterized protein LOC111474444 isoform X3 [Cucurbita maxima]) HSP 1 Score: 84.3 bits (207), Expect = 7.6e-13 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. NCBI nr
Match: XP_022925496.1 (uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_022925497.1 uncharacterized protein LOC111432782 isoform X2 [Cucurbita moschata]) HSP 1 Score: 84.0 bits (206), Expect = 9.9e-13 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. NCBI nr
Match: XP_022973509.1 (myosin light chain kinase, smooth muscle-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 84.0 bits (206), Expect = 9.9e-13 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. TrEMBL
Match: tr|A0A0A0K662|A0A0A0K662_CUCSA (Ankyrin repeat protein OS=Cucumis sativus OX=3659 GN=Csa_7G398740 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 8.4e-77 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. TrEMBL
Match: tr|A0A0A0K7W7|A0A0A0K7W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 44/124 (35.48%), Postives = 57/124 (45.97%), Query Frame = 0
BLAST of CsGy7G016120.1 vs. TrEMBL
Match: tr|A0A0A0K5J0|A0A0A0K5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 8.6e-05 Identity = 36/93 (38.71%), Postives = 45/93 (48.39%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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