CsGy6G012690.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAATCCCAACATCAAGGAAGCCATTACACTAAAATCCAACCAGTACTTGCATCGTGCCGAAGTGATTCGGTGCTCTCTTCGATGATGGCGGTCTTCCTGGAACGAGTTCTAGTGGATATGGGGTGGATCCAGAGCAAGCTAAGCTGCTGCCCGATCTTCATTACGTGATCATAAAGAAGAAAGCCAAACGTCAAGTGGATTGATGTCGCTGGATTGGAGAGTGCCAAACAGGCATTACAATAGGCTGCAATATTACCATTGAAGTTCCCTCAGTTCTTTACCGGTTAGTTATTCCATTTTACTTCAATATTGCAATTAATGTTGGATTACTCCATTGGGAGGAAAATGCTTGGTTGTTCTGGTTATGTGGCTCCTTTGTCTGTAATGTCATGGAGTTATCTCATTTGAAGTCATAATCTTATTGTCAATGAGCTTAATAAAATATTGTGATAGACACAATCATCTAACTTTGTTTAGGCAAAAGGGTACCAAGTAGAGCTTTCTTGTTATATGGGCCTCTTGGAACTGGAAAGTTGGCGAAGGCCATTTCTACAGAAGCTGACTCAACATTTTTCAGGTAATGGTTGTATGAACCCACGAATTGGATTTCCTCGTCTTTGGTAGTGCCATTCCACTTAATTAAGCAAATAGGCTTTTGTTAATTTGTTGCAACAGAATTTTCCTATTTGTTTTTAGTTAAGTAG ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAATCCCAACATCAAGGAAGCCATTACACTAAAATCCAACCAGTACTTGCATCGTGCCGAAGCAAAAGGGTACCAAGTAGAGCTTTCTTGTTATATGGGCCTCTTGGAACTGGAAAGTTGGCGAAGGCCATTTCTACAGAAGCTGACTCAACATTTTTCAGGTAATGGTTTTAAGTAG ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAATCCCAACATCAAGGAAGCCATTACACTAAAATCCAACCAGTACTTGCATCGTGCCGAAGCAAAAGGGTACCAAGTAGAGCTTTCTTGTTATATGGGCCTCTTGGAACTGGAAAGTTGGCGAAGGCCATTTCTACAGAAGCTGACTCAACATTTTTCAGGTAATGGTTTTAAGTAG MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAEAKGYQVELSCYMGLLELESWRRPFLQKLTQHFSGNGFK
BLAST of CsGy6G012690.1 vs. NCBI nr
Match: XP_008458578.1 (PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. NCBI nr
Match: XP_008458579.1 (PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. NCBI nr
Match: XP_016187569.1 (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Arachis ipaensis]) HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15 Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. NCBI nr
Match: XP_025641605.1 (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like [Arachis hypogaea]) HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15 Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. NCBI nr
Match: KVI00084.1 (AAA+ ATPase domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 89.4 bits (220), Expect = 7.3e-15 Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TAIR10
Match: AT2G27600.1 (AAA-type ATPase family protein) HSP 1 Score: 82.0 bits (201), Expect = 2.1e-16 Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TAIR10
Match: AT1G08270.2 (MIT (InterPro:IPR007330)) HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. Swiss-Prot
Match: sp|Q9ZNT0|VPS4_ARATH (Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana OX=3702 GN=SKD1 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.8e-15 Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. Swiss-Prot
Match: sp|Q54PT2|VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum OX=44689 GN=vps4 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06 Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. Swiss-Prot
Match: sp|Q4V7Q6|ULK3_XENLA (Serine/threonine-protein kinase ULK3 OS=Xenopus laevis OX=8355 GN=ulk3 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.8e-04 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. Swiss-Prot
Match: sp|Q3U3Q1|ULK3_MOUSE (Serine/threonine-protein kinase ULK3 OS=Mus musculus OX=10090 GN=Ulk3 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.0e-04 Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. Swiss-Prot
Match: sp|D3ZHP7|ULK3_RAT (Serine/threonine-protein kinase ULK3 OS=Rattus norvegicus OX=10116 GN=Ulk3 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.0e-04 Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TrEMBL
Match: tr|A0A1S3C864|A0A1S3C864_CUCME (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497939 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.7e-16 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TrEMBL
Match: tr|A0A1S3C8R9|A0A1S3C8R9_CUCME (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497939 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.7e-16 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TrEMBL
Match: tr|A0A103Y052|A0A103Y052_CYNCS (AAA+ ATPase domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_021675 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.8e-15 Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TrEMBL
Match: tr|A0A1S2YKH2|A0A1S2YKH2_CICAR (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like OS=Cicer arietinum OX=3827 GN=LOC101511576 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 8.2e-15 Identity = 44/55 (80.00%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of CsGy6G012690.1 vs. TrEMBL
Match: tr|A0A161Y2P2|A0A161Y2P2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012183 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14 Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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