CsGy6G012690 (gene) Cucumber (Gy14) v2

NameCsGy6G012690
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprotein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like
LocationChr6 : 10959641 .. 10960451 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAATCCCAACATCAAGGAAGCCATTACACTAAAATCCAACCAGTACTTGCATCGTGCCGAAGTGATTCGGTGCTCTCTTCGATGATGGCGGTCTTCCTGGAACGAGTTCTAGTGGATATGGGGTGGATCCAGAGCAAGCTAAGCTGCTGCCCGATCTTCATTACGTGATCATAAAGAAGAAAGCCAAACGTCAAGTGGATTGATGTCGCTGGATTGGAGAGTGCCAAACAGGCATTACAATAGGCTGCAATATTACCATTGAAGTTCCCTCAGTTCTTTACCGGTTAGTTATTCCATTTTACTTCAATATTGCAATTAATGTTGGATTACTCCATTGGGAGGAAAATGCTTGGTTGTTCTGGTTATGTGGCTCCTTTGTCTGTAATGTCATGGAGTTATCTCATTTGAAGTCATAATCTTATTGTCAATGAGCTTAATAAAATATTGTGATAGACACAATCATCTAACTTTGTTTAGGCAAAAGGGTACCAAGTAGAGCTTTCTTGTTATATGGGCCTCTTGGAACTGGAAAGTTGGCGAAGGCCATTTCTACAGAAGCTGACTCAACATTTTTCAGGTAATGGTTGTATGAACCCACGAATTGGATTTCCTCGTCTTTGGTAGTGCCATTCCACTTAATTAAGCAAATAGGCTTTTGTTAATTTGTTGCAACAGAATTTTCCTATTTGTTTTTAGTTAAGTAG

mRNA sequence

ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAATCCCAACATCAAGGAAGCCATTACACTAAAATCCAACCAGTACTTGCATCGTGCCGAAGCAAAAGGGTACCAAGTAGAGCTTTCTTGTTATATGGGCCTCTTGGAACTGGAAAGTTGGCGAAGGCCATTTCTACAGAAGCTGACTCAACATTTTTCAGGTAATGGTTTTAAGTAG

Coding sequence (CDS)

ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAATCCCAACATCAAGGAAGCCATTACACTAAAATCCAACCAGTACTTGCATCGTGCCGAAGCAAAAGGGTACCAAGTAGAGCTTTCTTGTTATATGGGCCTCTTGGAACTGGAAAGTTGGCGAAGGCCATTTCTACAGAAGCTGACTCAACATTTTTCAGGTAATGGTTTTAAGTAG

Protein sequence

MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAEAKGYQVELSCYMGLLELESWRRPFLQKLTQHFSGNGFK
BLAST of CsGy6G012690 vs. NCBI nr
Match: XP_008458578.1 (PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0

Query: 1   MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
           MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLK NQYL RAE
Sbjct: 119 MVKEAVQEDNAGNYAKAFPIYMEALENFKTVLKYEKNPEIKEAITLKFNQYLCRAE 174

BLAST of CsGy6G012690 vs. NCBI nr
Match: XP_008458579.1 (PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0

Query: 1  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLK NQYL RAE
Sbjct: 18 MVKEAVQEDNAGNYAKAFPIYMEALENFKTVLKYEKNPEIKEAITLKFNQYLCRAE 73

BLAST of CsGy6G012690 vs. NCBI nr
Match: XP_016187569.1 (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Arachis ipaensis])

HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP IKEAITLK  +YL RAE
Sbjct: 13 VKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITLKFTEYLRRAE 67

BLAST of CsGy6G012690 vs. NCBI nr
Match: XP_025641605.1 (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like [Arachis hypogaea])

HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP IKEAITLK  +YL RAE
Sbjct: 13 VKQAVQEDNNGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITLKFTEYLRRAE 67

BLAST of CsGy6G012690 vs. NCBI nr
Match: KVI00084.1 (AAA+ ATPase domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 89.4 bits (220), Expect = 7.3e-15
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP I+EAIT K  +YLHRAE
Sbjct: 13 VKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLHRAE 67

BLAST of CsGy6G012690 vs. TAIR10
Match: AT2G27600.1 (AAA-type ATPase family protein)

HSP 1 Score: 82.0 bits (201), Expect = 2.1e-16
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AV EDN+GNY KAF LYM ALE FKTH KYEKNP I+EAIT K  +YL RAE
Sbjct: 13 VKQAVHEDNAGNYNKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLRRAE 67

BLAST of CsGy6G012690 vs. TAIR10
Match: AT1G08270.2 (MIT (InterPro:IPR007330))

HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0

Query: 22 MKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          M ALE FK + KYEKNP I++AIT K  +YL RAE
Sbjct: 1  MNALEYFKIYLKYEKNPRIRDAITDKFYEYLRRAE 35

BLAST of CsGy6G012690 vs. Swiss-Prot
Match: sp|Q9ZNT0|VPS4_ARATH (Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana OX=3702 GN=SKD1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-15
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AV EDN+GNY KAF LYM ALE FKTH KYEKNP I+EAIT K  +YL RAE
Sbjct: 13 VKQAVHEDNAGNYNKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLRRAE 67

BLAST of CsGy6G012690 vs. Swiss-Prot
Match: sp|Q54PT2|VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum OX=44689 GN=vps4 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 1  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          +V++A ++DN+ NYA+A  LY+++LE F T  KYEK+   K  I  K+ +YL RAE
Sbjct: 13 IVQQATEQDNAKNYAEAHRLYIQSLEWFTTALKYEKSERSKATIKAKTLEYLQRAE 68

BLAST of CsGy6G012690 vs. Swiss-Prot
Match: sp|Q4V7Q6|ULK3_XENLA (Serine/threonine-protein kinase ULK3 OS=Xenopus laevis OX=8355 GN=ulk3 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-04
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 1   MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
           +V EAV++D++G ++ A  LY KALE F     YE +   KEA+  K  QY+ RAE
Sbjct: 286 LVVEAVEKDSAGEHSAALTLYCKALEYFIPALHYESDAKRKEAMRSKVCQYISRAE 341

BLAST of CsGy6G012690 vs. Swiss-Prot
Match: sp|Q3U3Q1|ULK3_MOUSE (Serine/threonine-protein kinase ULK3 OS=Mus musculus OX=10090 GN=Ulk3 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-04
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0

Query: 1   MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
           +V EAV++D  G+ A A  LY KAL+ F     YE +   KEAI  K  QY+ RAE
Sbjct: 287 LVVEAVKKDQEGDAAAALSLYCKALDFFVPALHYEVDAQRKEAIKAKVGQYVSRAE 342

BLAST of CsGy6G012690 vs. Swiss-Prot
Match: sp|D3ZHP7|ULK3_RAT (Serine/threonine-protein kinase ULK3 OS=Rattus norvegicus OX=10116 GN=Ulk3 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-04
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0

Query: 1   MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
           +V EAV++D  G+ A A  LY KAL+ F     YE +   KEAI  K  QY+ RAE
Sbjct: 287 LVVEAVKKDQEGDAAAALSLYCKALDFFVPALHYEVDAQRKEAIKAKVGQYVSRAE 342

BLAST of CsGy6G012690 vs. TrEMBL
Match: tr|A0A1S3C864|A0A1S3C864_CUCME (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497939 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.7e-16
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0

Query: 1   MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
           MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLK NQYL RAE
Sbjct: 119 MVKEAVQEDNAGNYAKAFPIYMEALENFKTVLKYEKNPEIKEAITLKFNQYLCRAE 174

BLAST of CsGy6G012690 vs. TrEMBL
Match: tr|A0A1S3C8R9|A0A1S3C8R9_CUCME (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497939 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.7e-16
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0

Query: 1  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLK NQYL RAE
Sbjct: 18 MVKEAVQEDNAGNYAKAFPIYMEALENFKTVLKYEKNPEIKEAITLKFNQYLCRAE 73

BLAST of CsGy6G012690 vs. TrEMBL
Match: tr|A0A103Y052|A0A103Y052_CYNCS (AAA+ ATPase domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_021675 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-15
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP I+EAIT K  +YLHRAE
Sbjct: 13 VKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLHRAE 67

BLAST of CsGy6G012690 vs. TrEMBL
Match: tr|A0A1S2YKH2|A0A1S2YKH2_CICAR (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like OS=Cicer arietinum OX=3827 GN=LOC101511576 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.2e-15
Identity = 44/55 (80.00%), Postives = 46/55 (83.64%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AVQEDNSGNYAKAF LYM ALE FKTH KYEKNP IKEAIT K  +YL RAE
Sbjct: 13 VKQAVQEDNSGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAE 67

BLAST of CsGy6G012690 vs. TrEMBL
Match: tr|A0A161Y2P2|A0A161Y2P2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012183 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0

Query: 2  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKSNQYLHRAE 57
          VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP IKEAIT K  +YL RAE
Sbjct: 13 VKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITAKFTEYLRRAE 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008458578.11.5e-1582.14PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 ... [more]
XP_008458579.11.5e-1582.14PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 ... [more]
XP_016187569.15.6e-1580.00protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Arachis ipaensis][more]
XP_025641605.15.6e-1580.00protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like [Arachis hypogaea][more]
KVI00084.17.3e-1578.18AAA+ ATPase domain-containing protein [Cynara cardunculus var. scolymus][more]
Match NameE-valueIdentityDescription
AT2G27600.12.1e-1672.73AAA-type ATPase family protein[more]
AT1G08270.22.9e-0562.86MIT (InterPro:IPR007330)[more]
Match NameE-valueIdentityDescription
sp|Q9ZNT0|VPS4_ARATH3.8e-1572.73Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana OX=... [more]
sp|Q54PT2|VPS4_DICDI1.4e-0646.43Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum OX=446... [more]
sp|Q4V7Q6|ULK3_XENLA1.8e-0444.64Serine/threonine-protein kinase ULK3 OS=Xenopus laevis OX=8355 GN=ulk3 PE=2 SV=1[more]
sp|Q3U3Q1|ULK3_MOUSE3.0e-0446.43Serine/threonine-protein kinase ULK3 OS=Mus musculus OX=10090 GN=Ulk3 PE=2 SV=1[more]
sp|D3ZHP7|ULK3_RAT3.0e-0446.43Serine/threonine-protein kinase ULK3 OS=Rattus norvegicus OX=10116 GN=Ulk3 PE=1 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3C864|A0A1S3C864_CUCME9.7e-1682.14protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 OS=Cucumis ... [more]
tr|A0A1S3C8R9|A0A1S3C8R9_CUCME9.7e-1682.14protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 OS=Cucumis ... [more]
tr|A0A103Y052|A0A103Y052_CYNCS4.8e-1578.18AAA+ ATPase domain-containing protein OS=Cynara cardunculus var. scolymus OX=598... [more]
tr|A0A1S2YKH2|A0A1S2YKH2_CICAR8.2e-1580.00protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like OS=Cicer arietinum OX=... [more]
tr|A0A161Y2P2|A0A161Y2P2_DAUCA1.4e-1478.18Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012183 ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036181MIT_dom_sf
IPR007330MIT
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009269 response to desiccation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G012690.1CsGy6G012690.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.58.280coord: 1..61
e-value: 8.2E-18
score: 66.0
NoneNo IPR availablePANTHERPTHR23074:SF137SUBFAMILY NOT NAMEDcoord: 2..56
NoneNo IPR availablePANTHERPTHR23074AAA ATPASEcoord: 2..56
IPR007330MITPFAMPF04212MITcoord: 1..56
e-value: 1.7E-15
score: 56.7
IPR036181MIT domain superfamilySUPERFAMILYSSF116846MIT domaincoord: 2..57

The following gene(s) are paralogous to this gene:

None