CsGy6G012510.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy6G012510.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionFatty acyl-CoA reductase
LocationChr6 : 10859703 .. 10862531 (-)
Sequence length564
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACACTTCACAAATTTTGTTGGTAAGCAGTTGCAATTATTATATCTTCACATTTTTCATACATTTCATACAACACTTCAAATATGTCTACACCTATATTTAGGTGCTGAATTTAATTGAATTTCACATTCGTGTTCATTTTTTTTTCCTTTTTCTTACCGTCTATTTTCTCGTTTAAAATATGCATTATGTTAGTCACGTTTCATTCTTTTTTTTTTTTTTTCTTTTGGCTCCATCAATAAGGGGCGAAGAATTTGAAATCAAGGTAAATAATATTTTTTTTCTTCAGTCACTTTAAGCGTTCAAGACATGTAATTTAGAAGTCTTGTTAGCCATTCATATTTTGGTTTATCAATGTAGAAATTAAATTTTATTATTCCATTTCTTTTAACTCTATTATTTTATAAAATTAATAATAATGATATATACACTTAAGTTCATCATAAACTACATCCATTTTTTGCATCCTACCACTACTAAAAATGAAACCTTATTTACTTTGGGAGAAAAAGAGAAAGAGAGAATAGTAATACCTCTTTTTTCCTTTTTACTTCTCGGATTTATCTCTTGTCGACTTCTCGAGCCTTAGAACTGGGCCACCTTTGCTAAAATAAAATTATTGCATTCACTATAGCGTTATAAATATATCCACACATCTGTACATAGCATACTGCATAGCTCTCAATTCTCTCACACACATGGATAAGTGTGACATTGCAATGGAGTTTCTTGAGAACAAGAGTGTTTTGGTCACAGACAAAAATATTGATTGTGCTACATACGAGAGTTTTTTTTTCTTTTTTAGGTTTTTGTTATATATATGGAGGATGATTTGCATCGTGATTATAATTGTCATTACATACAAACATTCCACTAATAATATTAACAACATGAACTAAGTATAAATTATAATATATCCTTTTGAAGTTTGAAGACAAATAGATACAACACTCCACGCTTAGAAAGTAAATTTAAAATTTAATATGTTTTTCTTTACCACCTTTTTTTTTAAAAAAAAACAAAATGACTTGAGTTACCTCCATTGTCATTTTGCTATAATATGGTTACATTAAATTATAGTTTTGGTGGAGAAAATATTGAGGATTCAACCAAATGTGAAGAAACTCTATCTACTAATAAGGGCCAAAGACAAGATGATAGCTATAAAACGTTTCTATGATGGTATACACATATTTGCTCAATACAAATCATTAGCATCTTTTTTTTTTTTTTTTTTTGTTTCTTAAATAATGTAACGTTGTTTTAAGTAATAGATAGGAAAAATAATGCATTATGTCAATTACACAGGTGATAGGAAAGGATTTGTTTAAAGTATTAAAGAAGATGTGGGGTGGAGAGTTTGATACCTTAATTTCAGAGAAGGTTTGTGTGGTACCCGGGGATGTTTTACTCACACAAATGGGATGGATACATTCAAATTTGGTTGAAGAGATGAAGAATCAAGTGGAAATCATTGTTAATTTGGCTGCCACAACCAAGTTCGATGAGAGGTACAAACAAAATACAAGATATTTTGTACCATTTTGTTTCGTCATTGTAAAATGTTTTCCATTTCTTTTTTAATAGATACTACGTCGCACTGGCTACTAATACCCTGGGAGCTAAACATGTTGTAAGCTTAGCAAAGCAGTGTCCTAATTTGAAACTTCTTGTCCATGTATCCACTGGTCAGTATACATCACTATATATTACATTATTGCGTATGAATACATTTTACCTTCTATTTTATTCTCCTTTATACCTTTGAAGGCTTGTTTGGATTAAAAGAGTGGAGTTGTGAATTTAAAATAATAATTTGAAGTGAAGTCATAAAAATTGTGAACTCCAAAGACCCACGGTAAAGAATTAATAAGATGATTGATAAATTTTCATTTGTGGGACCCACAAACCATAAACTCTCAACCCCTTAAGCCAAAAAAAAATCTCACCCATAAAAGTGAACAATGAGTTGAGTTCGAAAAAACTATGAAAACTAGAGAGCTATGAACTCTAATAATGTAATGTAAGAAGTTTTTTATAATACAAATTGGGATGAAGAGTTTGAATCTGGAATCTCTTAATCGTCGATGTAAACTCCATATAAATTGGGTGAGTCTCTTAATGGGATGGAAGGGCTAGACATTGGTACAGAACAGAAAGTAGCGGAAGAGAAGTTCAAACAACTTAAAGAAAATGGAGCTATGCAATAAACTATAAATCTAGCGTTGAAACACTTGGGCCTAGAAAGGTATACACTTAATTAAATCTTAAACAAGGCCTGGTTTTCCTTTTTGTTTTGGAACCGTTTGGATTTCTATTTTTGAAGACTAGACTTCTTACAATGATTTTCATCCTTAAGTAGCTTAATTTTTAGCTCAATTAAAAAACAAAACAAGTTTTTACAAACTACTTCTTTTTGTTTTAAAAAAATTGACTTAGTTTTTTAAAACATTCATAGATAGTACTTAGTAGATAATAAAAAAAATTTGAATTTAAAAGTCAGAGAGATATTTACAGAGTTAATTTTCAAAAACTAAATGTTTCCATGAAGTTATTTTAGATAATAAGATATTTTATAGTATTTAAAAAAATTTCAATTATGATTAAGATTAGGGCTAGGATGTATGGATGGCCTAAGTACATATGAATTTATAAAGGCAATGGGTGAGATGGTGGCGAGTGATCCAAAAAACAATCTACCTTTAATCATCATACGACCAACAATAGTTACAAGTACTTACAGAGAACCTTTTCCCGGATGGATTGAAGGCATCAGATACGTAGTTCAAGAATATCTTCCAAATCTGAATAGCTTCCCGAACTAA

mRNA sequence

ATGGCTACACTTCACAAATTTTGTTGTCACTTTAAGCGTTCAAGACATGTGATAGGAAAGGATTTGTTTAAAGTATTAAAGAAGATGTGGGGTGGAGAGTTTGATACCTTAATTTCAGAGAAGGTTTGTGTGGTACCCGGGGATGTTTTACTCACACAAATGGGATGGATACATTCAAATTTGGTTGAAGAGATGAAGAATCAAGTGGAAATCATTGTTAATTTGGCTGCCACAACCAAGTTCGATGAGAGATACTACGTCGCACTGGCTACTAATACCCTGGGAGCTAAACATGTTGTAAGCTTAGCAAAGCAGTGTCCTAATTTGAAACTTCTTGTCCATGTATCCACTGGGCTAGGATGTATGGATGGCCTAAGTACATATGAATTTATAAAGGCAATGGGTGAGATGGTGGCGAGTGATCCAAAAAACAATCTACCTTTAATCATCATACGACCAACAATAGTTACAAGTACTTACAGAGAACCTTTTCCCGGATGGATTGAAGGCATCAGATACGTAGTTCAAGAATATCTTCCAAATCTGAATAGCTTCCCGAACTAA

Coding sequence (CDS)

ATGGCTACACTTCACAAATTTTGTTGTCACTTTAAGCGTTCAAGACATGTGATAGGAAAGGATTTGTTTAAAGTATTAAAGAAGATGTGGGGTGGAGAGTTTGATACCTTAATTTCAGAGAAGGTTTGTGTGGTACCCGGGGATGTTTTACTCACACAAATGGGATGGATACATTCAAATTTGGTTGAAGAGATGAAGAATCAAGTGGAAATCATTGTTAATTTGGCTGCCACAACCAAGTTCGATGAGAGATACTACGTCGCACTGGCTACTAATACCCTGGGAGCTAAACATGTTGTAAGCTTAGCAAAGCAGTGTCCTAATTTGAAACTTCTTGTCCATGTATCCACTGGGCTAGGATGTATGGATGGCCTAAGTACATATGAATTTATAAAGGCAATGGGTGAGATGGTGGCGAGTGATCCAAAAAACAATCTACCTTTAATCATCATACGACCAACAATAGTTACAAGTACTTACAGAGAACCTTTTCCCGGATGGATTGAAGGCATCAGATACGTAGTTCAAGAATATCTTCCAAATCTGAATAGCTTCCCGAACTAA

Protein sequence

MATLHKFCCHFKRSRHVIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGCMDGLSTYEFIKAMGEMVASDPKNNLPLIIIRPTIVTSTYREPFPGWIEGIRYVVQEYLPNLNSFPN
Homology
[Close]
BLAST of CsGy6G012510.1 vs. NCBI nr
Match: XP_016902236.1 (PREDICTED: fatty acyl-CoA reductase 3-like [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 138/222 (62.16%), Postives = 145/222 (65.32%), Query Frame = 0 

Query: 18  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWI-HSNLVEEMKNQVEIIVNLA 77
           IGKDLFKVLKKMWGGEFDTLISEKVCVVPG+V LTQMG I  SNLVEEMKNQVEIIVNLA
Sbjct: 64  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGEVSLTQMGLIDDSNLVEEMKNQVEIIVNLA 123

Query: 78  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 137
           ATTKFDERY VALATNTLGAKHV+S AKQCPNLKLLVHVST                   
Sbjct: 124 ATTKFDERYDVALATNTLGAKHVISFAKQCPNLKLLVHVSTAYVSGEREGHILETPYKLG 183

Query: 138 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  M+GL                                            +TY F K
Sbjct: 184 ESLNGMEGLDIATEQKVAEEKFKQLQENGAMEETINLALKDLGLERARMYGWPNTYVFTK 243

[Close]
BLAST of CsGy6G012510.1 vs. NCBI nr
Match: XP_022986982.1 (fatty acyl-CoA reductase 3-like [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 125/222 (56.31%), Postives = 141/222 (63.51%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VIGKDLF+VLKKMWGG+FDTLISEKVCVVPG+V L++MG   SNLV EMKNQVE+IVNLA
Sbjct: 63  VIGKDLFQVLKKMWGGDFDTLISEKVCVVPGEVSLSEMGLKDSNLVAEMKNQVELIVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 136
           ATTKFDERY VA+ TNTLGAKH+VS AKQCPNLKLLVHVST                   
Sbjct: 123 ATTKFDERYDVAVGTNTLGAKHIVSFAKQCPNLKLLVHVSTAYVSGERGGLILETPYKLG 182

Query: 137 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  + GL                                            +TY F K
Sbjct: 183 ESLNGIQGLDIATEQTVMEEKLEQLEENGATKEAITLAMKDFGLERAKMYGWPNTYVFTK 242

[Close]
BLAST of CsGy6G012510.1 vs. NCBI nr
Match: XP_023512057.1 (fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.1 bits (562), Expect = 3.2e-54
Identity = 124/222 (55.86%), Postives = 139/222 (62.61%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VIGKDLF+VLKKMWGG+FDT+ISEKVCVVPG+V L++MG   SNLV EMKNQVE+IVNLA
Sbjct: 63  VIGKDLFQVLKKMWGGDFDTMISEKVCVVPGEVSLSEMGLKDSNLVAEMKNQVELIVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 136
           ATTKFDERY V + TNTLGAKHVVS AKQCPNLKLLVHVST                   
Sbjct: 123 ATTKFDERYDVTVGTNTLGAKHVVSFAKQCPNLKLLVHVSTAYVSGERGGLILETPYKLG 182

Query: 137 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  + GL                                            +TY F K
Sbjct: 183 ESLNGIQGLDIATEQKVMEEKLEQLEENGATKEAITLAMKDFGLERAKMYGWPNTYVFTK 242

[Close]
BLAST of CsGy6G012510.1 vs. NCBI nr
Match: XP_022943504.1 (fatty acyl-CoA reductase 3-like [Cucurbita moschata])

HSP 1 Score: 219.9 bits (559), Expect = 7.1e-54
Identity = 124/222 (55.86%), Postives = 140/222 (63.06%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VIGKDLF+VLKKMWG +FDTLISEKVCVVPG+V L+++G   SNLV EMKNQVE+IVNLA
Sbjct: 63  VIGKDLFQVLKKMWGRDFDTLISEKVCVVPGEVSLSEIGLKDSNLVAEMKNQVELIVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 136
           ATTKFDERY VA+ TNTLGAKHVVS AKQCPNLKLLVHVST                   
Sbjct: 123 ATTKFDERYDVAVGTNTLGAKHVVSFAKQCPNLKLLVHVSTAYVSGERGGLILETPYKLG 182

Query: 137 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  + GL                                            +TY F K
Sbjct: 183 ESLNGIQGLDIATEQKVMEEKLEQLEENGATKEAITLAMKDFGLERAKMYGWPNTYVFTK 242

[Close]
BLAST of CsGy6G012510.1 vs. NCBI nr
Match: XP_023532806.1 (fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 108/222 (48.65%), Postives = 129/222 (58.11%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VI KDLF+VL+K WG   +TLISEK+C+VPG++ L+QMG   S  V+EMKNQVEI++NLA
Sbjct: 56  VIEKDLFQVLRKKWGANLNTLISEKICLVPGEISLSQMGLKDSIWVDEMKNQVEIVINLA 115

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL--------- 136
           ATT FDERY VAL TNT+G +HVV  AK+C NLKLLVHVST    G  DG+         
Sbjct: 116 ATTHFDERYDVALDTNTIGVEHVVRFAKECRNLKLLVHVSTAYVSGERDGVILESSYKMG 175

Query: 137 -----------------------------------------------------STYEFIK 175
                                                                +TY F K
Sbjct: 176 ESLNGVKGLDIEEEQAIVADKLKQLKENGATEEFVTQTMKDLGLERANLYGWPNTYVFTK 235

[Close]
BLAST of CsGy6G012510.1 vs. TAIR10
Match: AT4G33790.1 (Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 151.0 bits (380), Expect = 7.4e-37
Identity = 87/222 (39.19%), Postives = 117/222 (52.70%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           ++ KDLFKVLK+ +G   + L SEK+ +V GD+ L  +G    +L  EM +QV+ IVNLA
Sbjct: 66  ILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLA 125

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC--------------- 136
           ATTKFDERY VAL  NTLGA +V++ AK+C  +K+LVHVST   C               
Sbjct: 126 ATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMG 185

Query: 137 ---------------------MDGL----------------------------STYEFIK 175
                                +D L                            +TY F K
Sbjct: 186 ETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFTK 245

[Close]
BLAST of CsGy6G012510.1 vs. TAIR10
Match: AT3G44550.1 (fatty acid reductase 5)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 90/230 (39.13%), Postives = 119/230 (51.74%), Query Frame = 0 

Query: 12  KRSR-HVIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQV 71
           KR R  V  K+LFKVL++  G E  +TL+ EKV  VPGD+   Q+G   S+L E M+ ++
Sbjct: 55  KRLRTEVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEI 114

Query: 72  EIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC-------- 131
           +I+VN+AATT FDERY V L  NT GA +V++ AK+C  ++LL+HVST   C        
Sbjct: 115 DIVVNVAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIP 174

Query: 132 -----------MDGL--------------------------------------------- 175
                       +GL                                             
Sbjct: 175 EKPFIMEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGW 234

[Close]
BLAST of CsGy6G012510.1 vs. TAIR10
Match: AT3G44560.1 (fatty acid reductase 8)

HSP 1 Score: 141.7 bits (356), Expect = 4.5e-34
Identity = 86/221 (38.91%), Postives = 114/221 (51.58%), Query Frame = 0 

Query: 20  KDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAAT 79
           KDLFKVL+   G E  +TL+SEKV  V GD+ +  +G   SNL E M+ +++I+VN+AAT
Sbjct: 64  KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123

Query: 80  TKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC----------------- 139
           T FDERY + L  NT GA +V++ AK+C   +LL+HVST   C                 
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183

Query: 140 --MDGL----------------------------------------------STYEFIKA 175
              +GL                                              +TY F K+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243

[Close]
BLAST of CsGy6G012510.1 vs. TAIR10
Match: AT3G44540.1 (fatty acid reductase 4)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32
Identity = 82/223 (36.77%), Postives = 115/223 (51.57%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNL 76
           V+ KDLF+VLK   G E     I+EKV  +PGD+ +  +G   S+L++ M N+++IIVN+
Sbjct: 61  VLEKDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNV 120

Query: 77  AATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL-------- 136
           AATT FDERY V L+ NT G  +V++ AK+C   +LL+HVST    G   GL        
Sbjct: 121 AATTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHM 180

Query: 137 ------------------------------------------------------STYEFI 175
                                                                 +TY F 
Sbjct: 181 GETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFT 240

[Close]
BLAST of CsGy6G012510.1 vs. TAIR10
Match: AT5G22500.1 (fatty acid reductase 1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 77/215 (35.81%), Postives = 110/215 (51.16%), Query Frame = 0 

Query: 21  DLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAATT 80
           DLFKVL+   G +  + L+ EK+  VPGD+ +  +G   ++L++ M ++++II+N+AATT
Sbjct: 65  DLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATT 124

Query: 81  KFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL------------ 140
            FDERY + L  NT GA +V++ AK+C   +LL+HVST    G   GL            
Sbjct: 125 NFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETL 184

Query: 141 ------------------------------------------------STYEFIKAMGEM 173
                                                           +TY F KAMGEM
Sbjct: 185 SGDRELDINIEHDLMKQKLKELQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEM 244

[Close]
BLAST of CsGy6G012510.1 vs. Swiss-Prot
Match: sp|Q93ZB9|FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 87/222 (39.19%), Postives = 117/222 (52.70%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           ++ KDLFKVLK+ +G   + L SEK+ +V GD+ L  +G    +L  EM +QV+ IVNLA
Sbjct: 66  ILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLA 125

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC--------------- 136
           ATTKFDERY VAL  NTLGA +V++ AK+C  +K+LVHVST   C               
Sbjct: 126 ATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMG 185

Query: 137 ---------------------MDGL----------------------------STYEFIK 175
                                +D L                            +TY F K
Sbjct: 186 ETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFTK 245

[Close]
BLAST of CsGy6G012510.1 vs. Swiss-Prot
Match: sp|Q0WRB0|FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana OX=3702 GN=FAR5 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.7e-33
Identity = 90/230 (39.13%), Postives = 119/230 (51.74%), Query Frame = 0 

Query: 12  KRSR-HVIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQV 71
           KR R  V  K+LFKVL++  G E  +TL+ EKV  VPGD+   Q+G   S+L E M+ ++
Sbjct: 55  KRLRTEVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEI 114

Query: 72  EIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC-------- 131
           +I+VN+AATT FDERY V L  NT GA +V++ AK+C  ++LL+HVST   C        
Sbjct: 115 DIVVNVAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIP 174

Query: 132 -----------MDGL--------------------------------------------- 175
                       +GL                                             
Sbjct: 175 EKPFIMEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGW 234

[Close]
BLAST of CsGy6G012510.1 vs. Swiss-Prot
Match: sp|Q1PEI6|FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana OX=3702 GN=FAR8 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.0e-33
Identity = 86/221 (38.91%), Postives = 114/221 (51.58%), Query Frame = 0 

Query: 20  KDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAAT 79
           KDLFKVL+   G E  +TL+SEKV  V GD+ +  +G   SNL E M+ +++I+VN+AAT
Sbjct: 64  KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123

Query: 80  TKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC----------------- 139
           T FDERY + L  NT GA +V++ AK+C   +LL+HVST   C                 
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183

Query: 140 --MDGL----------------------------------------------STYEFIKA 175
              +GL                                              +TY F K+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243

[Close]
BLAST of CsGy6G012510.1 vs. Swiss-Prot
Match: sp|Q9XGY7|FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 84/222 (37.84%), Postives = 112/222 (50.45%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           V GK+LFKVLK+  G  F + +SEKV VVPGD+    +     NL EEM  +++++VNLA
Sbjct: 63  VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL--------- 136
           AT  F ERY V+L  NT GAK+V+  AK+C  LK+ VHVST    G  +GL         
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182

Query: 137 -----------------------------------------------------STYEFIK 175
                                                                + Y F K
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242

[Close]
BLAST of CsGy6G012510.1 vs. Swiss-Prot
Match: sp|Q9LXN3|FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-31
Identity = 82/223 (36.77%), Postives = 115/223 (51.57%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNL 76
           V+ KDLF+VLK   G E     I+EKV  +PGD+ +  +G   S+L++ M N+++IIVN+
Sbjct: 61  VLEKDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNV 120

Query: 77  AATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL-------- 136
           AATT FDERY V L+ NT G  +V++ AK+C   +LL+HVST    G   GL        
Sbjct: 121 AATTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHM 180

Query: 137 ------------------------------------------------------STYEFI 175
                                                                 +TY F 
Sbjct: 181 GETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFT 240

[Close]
BLAST of CsGy6G012510.1 vs. TrEMBL
Match: tr|A0A1S4E1Y4|A0A1S4E1Y4_CUCME (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103498022 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.8e-61
Identity = 138/222 (62.16%), Postives = 145/222 (65.32%), Query Frame = 0 

Query: 18  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWI-HSNLVEEMKNQVEIIVNLA 77
           IGKDLFKVLKKMWGGEFDTLISEKVCVVPG+V LTQMG I  SNLVEEMKNQVEIIVNLA
Sbjct: 64  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGEVSLTQMGLIDDSNLVEEMKNQVEIIVNLA 123

Query: 78  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 137
           ATTKFDERY VALATNTLGAKHV+S AKQCPNLKLLVHVST                   
Sbjct: 124 ATTKFDERYDVALATNTLGAKHVISFAKQCPNLKLLVHVSTAYVSGEREGHILETPYKLG 183

Query: 138 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  M+GL                                            +TY F K
Sbjct: 184 ESLNGMEGLDIATEQKVAEEKFKQLQENGAMEETINLALKDLGLERARMYGWPNTYVFTK 243

[Close]
BLAST of CsGy6G012510.1 vs. TrEMBL
Match: tr|A0A1S4E1Z8|A0A1S4E1Z8_CUCME (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497951 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 112/235 (47.66%), Postives = 132/235 (56.17%), Query Frame = 0 

Query: 4   LHKFCCHFKRSRHVIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVE 63
           + +FC        V+GKDLFKVLKK WG   D  ISEKV VV  D+ ++ MG   S LVE
Sbjct: 56  MQRFC------NEVMGKDLFKVLKKKWGANLDRFISEKVSVVSSDISVSDMGLEDSTLVE 115

Query: 64  EMKNQVEIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------ 123
           E+K+ V+II+NLAATTKF+ERY VAL TNTLGAKHVV+ AKQCPN KLLVHVST      
Sbjct: 116 EIKHNVQIIINLAATTKFNERYDVALGTNTLGAKHVVNFAKQCPNFKLLVHVSTAYISGE 175

Query: 124 --------------GLGCMDGL-------------------------------------- 175
                          L   +GL                                      
Sbjct: 176 KEGFILETPHKLGESLNGTEGLNIEIEQKIIEQRLKQLKANGASEKDVTIAMKDLGIQRA 235

[Close]
BLAST of CsGy6G012510.1 vs. TrEMBL
Match: tr|A0A0A0KB44|A0A0A0KB44_CUCSA (Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_6G152310 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 109/235 (46.38%), Postives = 130/235 (55.32%), Query Frame = 0 

Query: 4   LHKFCCHFKRSRHVIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVE 63
           + +FC        V+GKDLFKVLK+ WG   D+ ISEKV VV  D+ ++ MG   S LVE
Sbjct: 57  MQRFC------NEVMGKDLFKVLKEKWGANLDSFISEKVSVVSSDISVSDMGLKDSILVE 116

Query: 64  EMKNQVEIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------ 123
           E+K+ V+II+NLAATT F+ERY VAL TNTLGAKHVV  AKQCPN KLLVHVST      
Sbjct: 117 EIKHNVQIIINLAATTNFNERYDVALGTNTLGAKHVVDFAKQCPNFKLLVHVSTAYISGE 176

Query: 124 --------------GLGCMDGL-------------------------------------- 175
                          L   +GL                                      
Sbjct: 177 KEGFILETPHKLGESLNGTEGLNIEIEQKIIEQRLKQLKDNGASEKDVTIAMKDLGIQRA 236

[Close]
BLAST of CsGy6G012510.1 vs. TrEMBL
Match: tr|M5WHQ7|M5WHQ7_PRUPE (Fatty acyl-CoA reductase OS=Prunus persica OX=3760 GN=PRUPE_6G126900 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 100/222 (45.05%), Postives = 127/222 (57.21%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           +IGKDLF+VL++ WG   ++++SEK+ VVPGD+ L  +G   SNL EEM +Q+++IVNLA
Sbjct: 62  IIGKDLFRVLREKWGAGMNSIVSEKLTVVPGDISLEDLGLKDSNLREEMLSQIDVIVNLA 121

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC--MDGL--------- 136
           ATT FDERY VAL  NTLGAKHV++ AKQC  LK+LVHVST   C   DGL         
Sbjct: 122 ATTNFDERYDVALDINTLGAKHVLNFAKQCVKLKVLVHVSTAYVCGEKDGLLLENPYHMG 181

Query: 137 -----------------------------------------------------STYEFIK 175
                                                                +TY F K
Sbjct: 182 ETLNGTSGLDIDSEIRQVQEKLRELRAEGLTEQTITSDLKDFGLKRANIYGWPNTYVFTK 241

[Close]
BLAST of CsGy6G012510.1 vs. TrEMBL
Match: tr|A0A1S3C9F8|A0A1S3C9F8_CUCME (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497948 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.9e-43
Identity = 102/223 (45.74%), Postives = 131/223 (58.74%), Query Frame = 0 

Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNL-VEEMKNQVEIIVNL 76
           V+ K LF+VLKK +G   +TLISEK+C+VPG++ L Q+G  H ++ ++++K+QVEII+NL
Sbjct: 56  VVEKALFQVLKKKYGANLNTLISEKICLVPGEISLPQLGLKHDSIWIDKIKSQVEIIINL 115

Query: 77  AATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------ 136
           AATT FDERY VAL TN LGAKHV++ AKQC NLKL+VHVST                  
Sbjct: 116 AATTNFDERYDVALGTNALGAKHVINFAKQCSNLKLVVHVSTAYVSGEREGLIMETPYKM 175

Query: 137 --GLGCMDGL--------------------------------------------STYEFI 175
              L  M GL                                            +TY F 
Sbjct: 176 GESLNWMKGLDIEAEQMVIEDKLKQLKENGATNETITLAMKDLGLERSKLYGWPNTYVFT 235

The following BLAST results are available for this feature:
BLAST of CsGy6G012510.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902236.11.0e-6062.16PREDICTED: fatty acyl-CoA reductase 3-like [Cucumis melo][more]
XP_022986982.13.8e-5556.31fatty acyl-CoA reductase 3-like [Cucurbita maxima][more]
XP_023512057.13.2e-5455.86fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo][more]
XP_022943504.17.1e-5455.86fatty acyl-CoA reductase 3-like [Cucurbita moschata][more]
XP_023532806.11.2e-4548.65fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy6G012510.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33790.17.4e-3739.19Jojoba acyl CoA reductase-related male sterility protein[more]
AT3G44550.12.6e-3439.13fatty acid reductase 5[more]
AT3G44560.14.5e-3438.91fatty acid reductase 8[more]
AT3G44540.11.4e-3236.77fatty acid reductase 4[more]
AT5G22500.11.8e-3035.81fatty acid reductase 1[more]
BLAST of CsGy6G012510.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93ZB9|FACR3_ARATH1.3e-3539.19Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1[more]
sp|Q0WRB0|FACR5_ARATH4.7e-3339.13Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana OX=3702 GN=FAR5 PE=1... [more]
sp|Q1PEI6|FACR8_ARATH8.0e-3338.91Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana OX=3702 GN=FAR8 PE=1 SV=1[more]
sp|Q9XGY7|FAR_SIMCH1.1e-3237.84Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV... [more]
sp|Q9LXN3|FACR4_ARATH2.6e-3136.77Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1... [more]
BLAST of CsGy6G012510.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E1Y4|A0A1S4E1Y4_CUCME6.8e-6162.16Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103498022 PE=3 SV=1[more]
tr|A0A1S4E1Z8|A0A1S4E1Z8_CUCME3.1e-4547.66Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497951 PE=3 SV=1[more]
tr|A0A0A0KB44|A0A0A0KB44_CUCSA1.3e-4346.38Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_6G152310 PE=3 SV=1[more]
tr|M5WHQ7|M5WHQ7_PRUPE2.9e-4345.05Fatty acyl-CoA reductase OS=Prunus persica OX=3760 GN=PRUPE_6G126900 PE=3 SV=1[more]
tr|A0A1S3C9F8|A0A1S3C9F8_CUCME4.9e-4345.74Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497948 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0080019fatty-acyl-CoA reductase (alcohol-forming) activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR026055FAR
IPR013120Male_sterile_NAD-bd
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity
molecular_function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy6G012510CsGy6G012510gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy6G012510.1CsGy6G012510.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy6G012510.1.CDS.5CsGy6G012510.1.CDS.5CDS
CsGy6G012510.1.CDS.4CsGy6G012510.1.CDS.4CDS
CsGy6G012510.1.CDS.3CsGy6G012510.1.CDS.3CDS
CsGy6G012510.1.CDS.2CsGy6G012510.1.CDS.2CDS
CsGy6G012510.1.CDS.1CsGy6G012510.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy6G012510.1.exon.5CsGy6G012510.1.exon.5exon
CsGy6G012510.1.exon.4CsGy6G012510.1.exon.4exon
CsGy6G012510.1.exon.3CsGy6G012510.1.exon.3exon
CsGy6G012510.1.exon.2CsGy6G012510.1.exon.2exon
CsGy6G012510.1.exon.1CsGy6G012510.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013120Male sterility, NAD-bindingPFAMPF07993NAD_binding_4coord: 15..120
e-value: 1.9E-21
score: 76.3
coord: 126..175
e-value: 5.1E-9
score: 35.6
NoneNo IPR availableGENE3DG3DSA:3.40.50.720coord: 12..184
e-value: 1.6E-25
score: 91.9
NoneNo IPR availablePANTHERPTHR11011:SF25FATTY ACYL-COA REDUCTASE 3coord: 126..174
coord: 14..121
IPR026055Fatty acyl-CoA reductasePANTHERPTHR11011MALE STERILITY PROTEIN 2-RELATEDcoord: 14..121
IPR026055Fatty acyl-CoA reductasePANTHERPTHR11011MALE STERILITY PROTEIN 2-RELATEDcoord: 126..174
IPR036291NAD(P)-binding domain superfamilySUPERFAMILYSSF51735NAD(P)-binding Rossmann-fold domainscoord: 35..174