CsGy6G012510 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G012510
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Fatty acyl-CoA reductase
Location	Chr6 : 10859703 .. 10862531 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACACTTCACAAATTTTGTTGGTAAGCAGTTGCAATTATTATATCTTCACATTTTTCATACATTTCATACAACACTTCAAATATGTCTACACCTATATTTAGGTGCTGAATTTAATTGAATTTCACATTCGTGTTCATTTTTTTTTCCTTTTTCTTACCGTCTATTTTCTCGTTTAAAATATGCATTATGTTAGTCACGTTTCATTCTTTTTTTTTTTTTTTCTTTTGGCTCCATCAATAAGGGGCGAAGAATTTGAAATCAAGGTAAATAATATTTTTTTTCTTCAGTCACTTTAAGCGTTCAAGACATGTAATTTAGAAGTCTTGTTAGCCATTCATATTTTGGTTTATCAATGTAGAAATTAAATTTTATTATTCCATTTCTTTTAACTCTATTATTTTATAAAATTAATAATAATGATATATACACTTAAGTTCATCATAAACTACATCCATTTTTTGCATCCTACCACTACTAAAAATGAAACCTTATTTACTTTGGGAGAAAAAGAGAAAGAGAGAATAGTAATACCTCTTTTTTCCTTTTTACTTCTCGGATTTATCTCTTGTCGACTTCTCGAGCCTTAGAACTGGGCCACCTTTGCTAAAATAAAATTATTGCATTCACTATAGCGTTATAAATATATCCACACATCTGTACATAGCATACTGCATAGCTCTCAATTCTCTCACACACATGGATAAGTGTGACATTGCAATGGAGTTTCTTGAGAACAAGAGTGTTTTGGTCACAGACAAAAATATTGATTGTGCTACATACGAGAGTTTTTTTTTCTTTTTTAGGTTTTTGTTATATATATGGAGGATGATTTGCATCGTGATTATAATTGTCATTACATACAAACATTCCACTAATAATATTAACAACATGAACTAAGTATAAATTATAATATATCCTTTTGAAGTTTGAAGACAAATAGATACAACACTCCACGCTTAGAAAGTAAATTTAAAATTTAATATGTTTTTCTTTACCACCTTTTTTTTTAAAAAAAAACAAAATGACTTGAGTTACCTCCATTGTCATTTTGCTATAATATGGTTACATTAAATTATAGTTTTGGTGGAGAAAATATTGAGGATTCAACCAAATGTGAAGAAACTCTATCTACTAATAAGGGCCAAAGACAAGATGATAGCTATAAAACGTTTCTATGATGGTATACACATATTTGCTCAATACAAATCATTAGCATCTTTTTTTTTTTTTTTTTTTGTTTCTTAAATAATGTAACGTTGTTTTAAGTAATAGATAGGAAAAATAATGCATTATGTCAATTACACAGGTGATAGGAAAGGATTTGTTTAAAGTATTAAAGAAGATGTGGGGTGGAGAGTTTGATACCTTAATTTCAGAGAAGGTTTGTGTGGTACCCGGGGATGTTTTACTCACACAAATGGGATGGATACATTCAAATTTGGTTGAAGAGATGAAGAATCAAGTGGAAATCATTGTTAATTTGGCTGCCACAACCAAGTTCGATGAGAGGTACAAACAAAATACAAGATATTTTGTACCATTTTGTTTCGTCATTGTAAAATGTTTTCCATTTCTTTTTTAATAGATACTACGTCGCACTGGCTACTAATACCCTGGGAGCTAAACATGTTGTAAGCTTAGCAAAGCAGTGTCCTAATTTGAAACTTCTTGTCCATGTATCCACTGGTCAGTATACATCACTATATATTACATTATTGCGTATGAATACATTTTACCTTCTATTTTATTCTCCTTTATACCTTTGAAGGCTTGTTTGGATTAAAAGAGTGGAGTTGTGAATTTAAAATAATAATTTGAAGTGAAGTCATAAAAATTGTGAACTCCAAAGACCCACGGTAAAGAATTAATAAGATGATTGATAAATTTTCATTTGTGGGACCCACAAACCATAAACTCTCAACCCCTTAAGCCAAAAAAAAATCTCACCCATAAAAGTGAACAATGAGTTGAGTTCGAAAAAACTATGAAAACTAGAGAGCTATGAACTCTAATAATGTAATGTAAGAAGTTTTTTATAATACAAATTGGGATGAAGAGTTTGAATCTGGAATCTCTTAATCGTCGATGTAAACTCCATATAAATTGGGTGAGTCTCTTAATGGGATGGAAGGGCTAGACATTGGTACAGAACAGAAAGTAGCGGAAGAGAAGTTCAAACAACTTAAAGAAAATGGAGCTATGCAATAAACTATAAATCTAGCGTTGAAACACTTGGGCCTAGAAAGGTATACACTTAATTAAATCTTAAACAAGGCCTGGTTTTCCTTTTTGTTTTGGAACCGTTTGGATTTCTATTTTTGAAGACTAGACTTCTTACAATGATTTTCATCCTTAAGTAGCTTAATTTTTAGCTCAATTAAAAAACAAAACAAGTTTTTACAAACTACTTCTTTTTGTTTTAAAAAAATTGACTTAGTTTTTTAAAACATTCATAGATAGTACTTAGTAGATAATAAAAAAAATTTGAATTTAAAAGTCAGAGAGATATTTACAGAGTTAATTTTCAAAAACTAAATGTTTCCATGAAGTTATTTTAGATAATAAGATATTTTATAGTATTTAAAAAAATTTCAATTATGATTAAGATTAGGGCTAGGATGTATGGATGGCCTAAGTACATATGAATTTATAAAGGCAATGGGTGAGATGGTGGCGAGTGATCCAAAAAACAATCTACCTTTAATCATCATACGACCAACAATAGTTACAAGTACTTACAGAGAACCTTTTCCCGGATGGATTGAAGGCATCAGATACGTAGTTCAAGAATATCTTCCAAATCTGAATAGCTTCCCGAACTAA

mRNA sequence

ATGGCTACACTTCACAAATTTTGTTGTCACTTTAAGCGTTCAAGACATGTGATAGGAAAGGATTTGTTTAAAGTATTAAAGAAGATGTGGGGTGGAGAGTTTGATACCTTAATTTCAGAGAAGGTTTGTGTGGTACCCGGGGATGTTTTACTCACACAAATGGGATGGATACATTCAAATTTGGTTGAAGAGATGAAGAATCAAGTGGAAATCATTGTTAATTTGGCTGCCACAACCAAGTTCGATGAGAGATACTACGTCGCACTGGCTACTAATACCCTGGGAGCTAAACATGTTGTAAGCTTAGCAAAGCAGTGTCCTAATTTGAAACTTCTTGTCCATGTATCCACTGGGCTAGGATGTATGGATGGCCTAAGTACATATGAATTTATAAAGGCAATGGGTGAGATGGTGGCGAGTGATCCAAAAAACAATCTACCTTTAATCATCATACGACCAACAATAGTTACAAGTACTTACAGAGAACCTTTTCCCGGATGGATTGAAGGCATCAGATACGTAGTTCAAGAATATCTTCCAAATCTGAATAGCTTCCCGAACTAA

Coding sequence (CDS)

ATGGCTACACTTCACAAATTTTGTTGTCACTTTAAGCGTTCAAGACATGTGATAGGAAAGGATTTGTTTAAAGTATTAAAGAAGATGTGGGGTGGAGAGTTTGATACCTTAATTTCAGAGAAGGTTTGTGTGGTACCCGGGGATGTTTTACTCACACAAATGGGATGGATACATTCAAATTTGGTTGAAGAGATGAAGAATCAAGTGGAAATCATTGTTAATTTGGCTGCCACAACCAAGTTCGATGAGAGATACTACGTCGCACTGGCTACTAATACCCTGGGAGCTAAACATGTTGTAAGCTTAGCAAAGCAGTGTCCTAATTTGAAACTTCTTGTCCATGTATCCACTGGGCTAGGATGTATGGATGGCCTAAGTACATATGAATTTATAAAGGCAATGGGTGAGATGGTGGCGAGTGATCCAAAAAACAATCTACCTTTAATCATCATACGACCAACAATAGTTACAAGTACTTACAGAGAACCTTTTCCCGGATGGATTGAAGGCATCAGATACGTAGTTCAAGAATATCTTCCAAATCTGAATAGCTTCCCGAACTAA

Protein sequence

MATLHKFCCHFKRSRHVIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGCMDGLSTYEFIKAMGEMVASDPKNNLPLIIIRPTIVTSTYREPFPGWIEGIRYVVQEYLPNLNSFPN

Homology

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BLAST of CsGy6G012510 vs. NCBI nr
Match: XP_016902236.1 (PREDICTED: fatty acyl-CoA reductase 3-like [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 138/222 (62.16%), Postives = 145/222 (65.32%), Query Frame = 0


Query: 18  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWI-HSNLVEEMKNQVEIIVNLA 77
           IGKDLFKVLKKMWGGEFDTLISEKVCVVPG+V LTQMG I  SNLVEEMKNQVEIIVNLA
Sbjct: 64  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGEVSLTQMGLIDDSNLVEEMKNQVEIIVNLA 123

Query: 78  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 137
           ATTKFDERY VALATNTLGAKHV+S AKQCPNLKLLVHVST                   
Sbjct: 124 ATTKFDERYDVALATNTLGAKHVISFAKQCPNLKLLVHVSTAYVSGEREGHILETPYKLG 183

Query: 138 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  M+GL                                            +TY F K
Sbjct: 184 ESLNGMEGLDIATEQKVAEEKFKQLQENGAMEETINLALKDLGLERARMYGWPNTYVFTK 243

[Close]

BLAST of CsGy6G012510 vs. NCBI nr
Match: XP_022986982.1 (fatty acyl-CoA reductase 3-like [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 125/222 (56.31%), Postives = 141/222 (63.51%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VIGKDLF+VLKKMWGG+FDTLISEKVCVVPG+V L++MG   SNLV EMKNQVE+IVNLA
Sbjct: 63  VIGKDLFQVLKKMWGGDFDTLISEKVCVVPGEVSLSEMGLKDSNLVAEMKNQVELIVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 136
           ATTKFDERY VA+ TNTLGAKH+VS AKQCPNLKLLVHVST                   
Sbjct: 123 ATTKFDERYDVAVGTNTLGAKHIVSFAKQCPNLKLLVHVSTAYVSGERGGLILETPYKLG 182

Query: 137 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  + GL                                            +TY F K
Sbjct: 183 ESLNGIQGLDIATEQTVMEEKLEQLEENGATKEAITLAMKDFGLERAKMYGWPNTYVFTK 242

[Close]

BLAST of CsGy6G012510 vs. NCBI nr
Match: XP_023512057.1 (fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.1 bits (562), Expect = 3.2e-54
Identity = 124/222 (55.86%), Postives = 139/222 (62.61%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VIGKDLF+VLKKMWGG+FDT+ISEKVCVVPG+V L++MG   SNLV EMKNQVE+IVNLA
Sbjct: 63  VIGKDLFQVLKKMWGGDFDTMISEKVCVVPGEVSLSEMGLKDSNLVAEMKNQVELIVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 136
           ATTKFDERY V + TNTLGAKHVVS AKQCPNLKLLVHVST                   
Sbjct: 123 ATTKFDERYDVTVGTNTLGAKHVVSFAKQCPNLKLLVHVSTAYVSGERGGLILETPYKLG 182

Query: 137 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  + GL                                            +TY F K
Sbjct: 183 ESLNGIQGLDIATEQKVMEEKLEQLEENGATKEAITLAMKDFGLERAKMYGWPNTYVFTK 242

[Close]

BLAST of CsGy6G012510 vs. NCBI nr
Match: XP_022943504.1 (fatty acyl-CoA reductase 3-like [Cucurbita moschata])

HSP 1 Score: 219.9 bits (559), Expect = 7.1e-54
Identity = 124/222 (55.86%), Postives = 140/222 (63.06%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VIGKDLF+VLKKMWG +FDTLISEKVCVVPG+V L+++G   SNLV EMKNQVE+IVNLA
Sbjct: 63  VIGKDLFQVLKKMWGRDFDTLISEKVCVVPGEVSLSEIGLKDSNLVAEMKNQVELIVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 136
           ATTKFDERY VA+ TNTLGAKHVVS AKQCPNLKLLVHVST                   
Sbjct: 123 ATTKFDERYDVAVGTNTLGAKHVVSFAKQCPNLKLLVHVSTAYVSGERGGLILETPYKLG 182

Query: 137 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  + GL                                            +TY F K
Sbjct: 183 ESLNGIQGLDIATEQKVMEEKLEQLEENGATKEAITLAMKDFGLERAKMYGWPNTYVFTK 242

[Close]

BLAST of CsGy6G012510 vs. NCBI nr
Match: XP_023532806.1 (fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 108/222 (48.65%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           VI KDLF+VL+K WG   +TLISEK+C+VPG++ L+QMG   S  V+EMKNQVEI++NLA
Sbjct: 56  VIEKDLFQVLRKKWGANLNTLISEKICLVPGEISLSQMGLKDSIWVDEMKNQVEIVINLA 115

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL--------- 136
           ATT FDERY VAL TNT+G +HVV  AK+C NLKLLVHVST    G  DG+         
Sbjct: 116 ATTHFDERYDVALDTNTIGVEHVVRFAKECRNLKLLVHVSTAYVSGERDGVILESSYKMG 175

Query: 137 -----------------------------------------------------STYEFIK 175
                                                                +TY F K
Sbjct: 176 ESLNGVKGLDIEEEQAIVADKLKQLKENGATEEFVTQTMKDLGLERANLYGWPNTYVFTK 235

[Close]

BLAST of CsGy6G012510 vs. TAIR10
Match: AT4G33790.1 (Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 151.0 bits (380), Expect = 7.4e-37
Identity = 87/222 (39.19%), Postives = 117/222 (52.70%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           ++ KDLFKVLK+ +G   + L SEK+ +V GD+ L  +G    +L  EM +QV+ IVNLA
Sbjct: 66  ILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLA 125

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC--------------- 136
           ATTKFDERY VAL  NTLGA +V++ AK+C  +K+LVHVST   C               
Sbjct: 126 ATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMG 185

Query: 137 ---------------------MDGL----------------------------STYEFIK 175
                                +D L                            +TY F K
Sbjct: 186 ETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFTK 245

[Close]

BLAST of CsGy6G012510 vs. TAIR10
Match: AT3G44550.1 (fatty acid reductase 5)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 90/230 (39.13%), Postives = 119/230 (51.74%), Query Frame = 0


Query: 12  KRSR-HVIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQV 71
           KR R  V  K+LFKVL++  G E  +TL+ EKV  VPGD+   Q+G   S+L E M+ ++
Sbjct: 55  KRLRTEVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEI 114

Query: 72  EIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC-------- 131
           +I+VN+AATT FDERY V L  NT GA +V++ AK+C  ++LL+HVST   C        
Sbjct: 115 DIVVNVAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIP 174

Query: 132 -----------MDGL--------------------------------------------- 175
                       +GL                                             
Sbjct: 175 EKPFIMEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGW 234

[Close]

BLAST of CsGy6G012510 vs. TAIR10
Match: AT3G44560.1 (fatty acid reductase 8)

HSP 1 Score: 141.7 bits (356), Expect = 4.5e-34
Identity = 86/221 (38.91%), Postives = 114/221 (51.58%), Query Frame = 0


Query: 20  KDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAAT 79
           KDLFKVL+   G E  +TL+SEKV  V GD+ +  +G   SNL E M+ +++I+VN+AAT
Sbjct: 64  KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123

Query: 80  TKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC----------------- 139
           T FDERY + L  NT GA +V++ AK+C   +LL+HVST   C                 
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183

Query: 140 --MDGL----------------------------------------------STYEFIKA 175
              +GL                                              +TY F K+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243

[Close]

BLAST of CsGy6G012510 vs. TAIR10
Match: AT3G44540.1 (fatty acid reductase 4)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32
Identity = 82/223 (36.77%), Postives = 115/223 (51.57%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNL 76
           V+ KDLF+VLK   G E     I+EKV  +PGD+ +  +G   S+L++ M N+++IIVN+
Sbjct: 61  VLEKDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNV 120

Query: 77  AATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL-------- 136
           AATT FDERY V L+ NT G  +V++ AK+C   +LL+HVST    G   GL        
Sbjct: 121 AATTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHM 180

Query: 137 ------------------------------------------------------STYEFI 175
                                                                 +TY F 
Sbjct: 181 GETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFT 240

[Close]

BLAST of CsGy6G012510 vs. TAIR10
Match: AT5G22500.1 (fatty acid reductase 1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 77/215 (35.81%), Postives = 110/215 (51.16%), Query Frame = 0


Query: 21  DLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAATT 80
           DLFKVL+   G +  + L+ EK+  VPGD+ +  +G   ++L++ M ++++II+N+AATT
Sbjct: 65  DLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATT 124

Query: 81  KFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL------------ 140
            FDERY + L  NT GA +V++ AK+C   +LL+HVST    G   GL            
Sbjct: 125 NFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETL 184

Query: 141 ------------------------------------------------STYEFIKAMGEM 173
                                                           +TY F KAMGEM
Sbjct: 185 SGDRELDINIEHDLMKQKLKELQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEM 244

[Close]

BLAST of CsGy6G012510 vs. Swiss-Prot
Match: sp|Q93ZB9|FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 87/222 (39.19%), Postives = 117/222 (52.70%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           ++ KDLFKVLK+ +G   + L SEK+ +V GD+ L  +G    +L  EM +QV+ IVNLA
Sbjct: 66  ILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLA 125

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC--------------- 136
           ATTKFDERY VAL  NTLGA +V++ AK+C  +K+LVHVST   C               
Sbjct: 126 ATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMG 185

Query: 137 ---------------------MDGL----------------------------STYEFIK 175
                                +D L                            +TY F K
Sbjct: 186 ETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFTK 245

[Close]

BLAST of CsGy6G012510 vs. Swiss-Prot
Match: sp|Q0WRB0|FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana OX=3702 GN=FAR5 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.7e-33
Identity = 90/230 (39.13%), Postives = 119/230 (51.74%), Query Frame = 0


Query: 12  KRSR-HVIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQV 71
           KR R  V  K+LFKVL++  G E  +TL+ EKV  VPGD+   Q+G   S+L E M+ ++
Sbjct: 55  KRLRTEVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEI 114

Query: 72  EIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC-------- 131
           +I+VN+AATT FDERY V L  NT GA +V++ AK+C  ++LL+HVST   C        
Sbjct: 115 DIVVNVAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIP 174

Query: 132 -----------MDGL--------------------------------------------- 175
                       +GL                                             
Sbjct: 175 EKPFIMEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGW 234

[Close]

BLAST of CsGy6G012510 vs. Swiss-Prot
Match: sp|Q1PEI6|FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana OX=3702 GN=FAR8 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.0e-33
Identity = 86/221 (38.91%), Postives = 114/221 (51.58%), Query Frame = 0


Query: 20  KDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLAAT 79
           KDLFKVL+   G E  +TL+SEKV  V GD+ +  +G   SNL E M+ +++I+VN+AAT
Sbjct: 64  KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123

Query: 80  TKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC----------------- 139
           T FDERY + L  NT GA +V++ AK+C   +LL+HVST   C                 
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183

Query: 140 --MDGL----------------------------------------------STYEFIKA 175
              +GL                                              +TY F K+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243

[Close]

BLAST of CsGy6G012510 vs. Swiss-Prot
Match: sp|Q9XGY7|FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 84/222 (37.84%), Postives = 112/222 (50.45%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           V GK+LFKVLK+  G  F + +SEKV VVPGD+    +     NL EEM  +++++VNLA
Sbjct: 63  VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL--------- 136
           AT  F ERY V+L  NT GAK+V+  AK+C  LK+ VHVST    G  +GL         
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182

Query: 137 -----------------------------------------------------STYEFIK 175
                                                                + Y F K
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242

[Close]

BLAST of CsGy6G012510 vs. Swiss-Prot
Match: sp|Q9LXN3|FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-31
Identity = 82/223 (36.77%), Postives = 115/223 (51.57%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGE-FDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNL 76
           V+ KDLF+VLK   G E     I+EKV  +PGD+ +  +G   S+L++ M N+++IIVN+
Sbjct: 61  VLEKDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNV 120

Query: 77  AATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGL--GCMDGL-------- 136
           AATT FDERY V L+ NT G  +V++ AK+C   +LL+HVST    G   GL        
Sbjct: 121 AATTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHM 180

Query: 137 ------------------------------------------------------STYEFI 175
                                                                 +TY F 
Sbjct: 181 GETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFT 240

[Close]

BLAST of CsGy6G012510 vs. TrEMBL
Match: tr|A0A1S4E1Y4|A0A1S4E1Y4_CUCME (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103498022 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.8e-61
Identity = 138/222 (62.16%), Postives = 145/222 (65.32%), Query Frame = 0


Query: 18  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWI-HSNLVEEMKNQVEIIVNLA 77
           IGKDLFKVLKKMWGGEFDTLISEKVCVVPG+V LTQMG I  SNLVEEMKNQVEIIVNLA
Sbjct: 64  IGKDLFKVLKKMWGGEFDTLISEKVCVVPGEVSLTQMGLIDDSNLVEEMKNQVEIIVNLA 123

Query: 78  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------- 137
           ATTKFDERY VALATNTLGAKHV+S AKQCPNLKLLVHVST                   
Sbjct: 124 ATTKFDERYDVALATNTLGAKHVISFAKQCPNLKLLVHVSTAYVSGEREGHILETPYKLG 183

Query: 138 -GLGCMDGL--------------------------------------------STYEFIK 175
             L  M+GL                                            +TY F K
Sbjct: 184 ESLNGMEGLDIATEQKVAEEKFKQLQENGAMEETINLALKDLGLERARMYGWPNTYVFTK 243

[Close]

BLAST of CsGy6G012510 vs. TrEMBL
Match: tr|A0A1S4E1Z8|A0A1S4E1Z8_CUCME (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497951 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 112/235 (47.66%), Postives = 132/235 (56.17%), Query Frame = 0


Query: 4   LHKFCCHFKRSRHVIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVE 63
           + +FC        V+GKDLFKVLKK WG   D  ISEKV VV  D+ ++ MG   S LVE
Sbjct: 56  MQRFC------NEVMGKDLFKVLKKKWGANLDRFISEKVSVVSSDISVSDMGLEDSTLVE 115

Query: 64  EMKNQVEIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------ 123
           E+K+ V+II+NLAATTKF+ERY VAL TNTLGAKHVV+ AKQCPN KLLVHVST      
Sbjct: 116 EIKHNVQIIINLAATTKFNERYDVALGTNTLGAKHVVNFAKQCPNFKLLVHVSTAYISGE 175

Query: 124 --------------GLGCMDGL-------------------------------------- 175
                          L   +GL                                      
Sbjct: 176 KEGFILETPHKLGESLNGTEGLNIEIEQKIIEQRLKQLKANGASEKDVTIAMKDLGIQRA 235

[Close]

BLAST of CsGy6G012510 vs. TrEMBL
Match: tr|A0A0A0KB44|A0A0A0KB44_CUCSA (Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_6G152310 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 109/235 (46.38%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 4   LHKFCCHFKRSRHVIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVE 63
           + +FC        V+GKDLFKVLK+ WG   D+ ISEKV VV  D+ ++ MG   S LVE
Sbjct: 57  MQRFC------NEVMGKDLFKVLKEKWGANLDSFISEKVSVVSSDISVSDMGLKDSILVE 116

Query: 64  EMKNQVEIIVNLAATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------ 123
           E+K+ V+II+NLAATT F+ERY VAL TNTLGAKHVV  AKQCPN KLLVHVST      
Sbjct: 117 EIKHNVQIIINLAATTNFNERYDVALGTNTLGAKHVVDFAKQCPNFKLLVHVSTAYISGE 176

Query: 124 --------------GLGCMDGL-------------------------------------- 175
                          L   +GL                                      
Sbjct: 177 KEGFILETPHKLGESLNGTEGLNIEIEQKIIEQRLKQLKDNGASEKDVTIAMKDLGIQRA 236

[Close]

BLAST of CsGy6G012510 vs. TrEMBL
Match: tr|M5WHQ7|M5WHQ7_PRUPE (Fatty acyl-CoA reductase OS=Prunus persica OX=3760 GN=PRUPE_6G126900 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 100/222 (45.05%), Postives = 127/222 (57.21%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNLVEEMKNQVEIIVNLA 76
           +IGKDLF+VL++ WG   ++++SEK+ VVPGD+ L  +G   SNL EEM +Q+++IVNLA
Sbjct: 62  IIGKDLFRVLREKWGAGMNSIVSEKLTVVPGDISLEDLGLKDSNLREEMLSQIDVIVNLA 121

Query: 77  ATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVSTGLGC--MDGL--------- 136
           ATT FDERY VAL  NTLGAKHV++ AKQC  LK+LVHVST   C   DGL         
Sbjct: 122 ATTNFDERYDVALDINTLGAKHVLNFAKQCVKLKVLVHVSTAYVCGEKDGLLLENPYHMG 181

Query: 137 -----------------------------------------------------STYEFIK 175
                                                                +TY F K
Sbjct: 182 ETLNGTSGLDIDSEIRQVQEKLRELRAEGLTEQTITSDLKDFGLKRANIYGWPNTYVFTK 241

[Close]

BLAST of CsGy6G012510 vs. TrEMBL
Match: tr|A0A1S3C9F8|A0A1S3C9F8_CUCME (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497948 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.9e-43
Identity = 102/223 (45.74%), Postives = 131/223 (58.74%), Query Frame = 0


Query: 17  VIGKDLFKVLKKMWGGEFDTLISEKVCVVPGDVLLTQMGWIHSNL-VEEMKNQVEIIVNL 76
           V+ K LF+VLKK +G   +TLISEK+C+VPG++ L Q+G  H ++ ++++K+QVEII+NL
Sbjct: 56  VVEKALFQVLKKKYGANLNTLISEKICLVPGEISLPQLGLKHDSIWIDKIKSQVEIIINL 115

Query: 77  AATTKFDERYYVALATNTLGAKHVVSLAKQCPNLKLLVHVST------------------ 136
           AATT FDERY VAL TN LGAKHV++ AKQC NLKL+VHVST                  
Sbjct: 116 AATTNFDERYDVALGTNALGAKHVINFAKQCSNLKLVVHVSTAYVSGEREGLIMETPYKM 175

Query: 137 --GLGCMDGL--------------------------------------------STYEFI 175
              L  M GL                                            +TY F 
Sbjct: 176 GESLNWMKGLDIEAEQMVIEDKLKQLKENGATNETITLAMKDLGLERSKLYGWPNTYVFT 235

The following BLAST results are available for this feature:

BLAST of CsGy6G012510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902236.1	1.0e-60	62.16	PREDICTED: fatty acyl-CoA reductase 3-like [Cucumis melo]	[more]
XP_022986982.1	3.8e-55	56.31	fatty acyl-CoA reductase 3-like [Cucurbita maxima]	[more]
XP_023512057.1	3.2e-54	55.86	fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943504.1	7.1e-54	55.86	fatty acyl-CoA reductase 3-like [Cucurbita moschata]	[more]
XP_023532806.1	1.2e-45	48.65	fatty acyl-CoA reductase 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G012510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33790.1	7.4e-37	39.19	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G44550.1	2.6e-34	39.13	fatty acid reductase 5	[more]
AT3G44560.1	4.5e-34	38.91	fatty acid reductase 8	[more]
AT3G44540.1	1.4e-32	36.77	fatty acid reductase 4	[more]
AT5G22500.1	1.8e-30	35.81	fatty acid reductase 1	[more]

BLAST of CsGy6G012510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93ZB9\|FACR3_ARATH	1.3e-35	39.19	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1	[more]
sp\|Q0WRB0\|FACR5_ARATH	4.7e-33	39.13	Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana OX=3702 GN=FAR5 PE=1...	[more]
sp\|Q1PEI6\|FACR8_ARATH	8.0e-33	38.91	Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana OX=3702 GN=FAR8 PE=1 SV=1	[more]
sp\|Q9XGY7\|FAR_SIMCH	1.1e-32	37.84	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV...	[more]
sp\|Q9LXN3\|FACR4_ARATH	2.6e-31	36.77	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1...	[more]

BLAST of CsGy6G012510 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1Y4\|A0A1S4E1Y4_CUCME	6.8e-61	62.16	Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103498022 PE=3 SV=1	[more]
tr\|A0A1S4E1Z8\|A0A1S4E1Z8_CUCME	3.1e-45	47.66	Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497951 PE=3 SV=1	[more]
tr\|A0A0A0KB44\|A0A0A0KB44_CUCSA	1.3e-43	46.38	Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_6G152310 PE=3 SV=1	[more]
tr\|M5WHQ7\|M5WHQ7_PRUPE	2.9e-43	45.05	Fatty acyl-CoA reductase OS=Prunus persica OX=3760 GN=PRUPE_6G126900 PE=3 SV=1	[more]
tr\|A0A1S3C9F8\|A0A1S3C9F8_CUCME	4.9e-43	45.74	Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103497948 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR026055	FAR
IPR013120	Male_sterile_NAD-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012510.1	CsGy6G012510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013120	Male sterility, NAD-binding	PFAM	PF07993	NAD_binding_4	coord: 15..120 e-value: 1.9E-21 score: 76.3 coord: 126..175 e-value: 5.1E-9 score: 35.6
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 12..184 e-value: 1.6E-25 score: 91.9
None	No IPR available	PANTHER	PTHR11011:SF25	FATTY ACYL-COA REDUCTASE 3	coord: 126..174 coord: 14..121
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 14..121
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 126..174
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 35..174

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G012510	MELO3C021431	Melon (DHL92) v3.5.1	cgybmeB365
CsGy6G012510	MELO3C035177.2	Melon (DHL92) v3.6.1	cgybmedB366
CsGy6G012510	Cla97C02G048150	Watermelon (97103) v2	cgybwmbB406
CsGy6G012510	Bhi10G000037	Wax gourd	cgybwgoB579

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G012510	Silver-seed gourd	carcgybB0265
CsGy6G012510	Silver-seed gourd	carcgybB0422
CsGy6G012510	Silver-seed gourd	carcgybB0915
CsGy6G012510	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G012510	Cucumber (Chinese Long) v3	cgybcucB299
CsGy6G012510	Watermelon (97103) v2	cgybwmbB399
CsGy6G012510	Watermelon (97103) v2	cgybwmbB432
CsGy6G012510	Cucumber (Gy14) v2	cgybcgybB102
CsGy6G012510	Cucumber (Gy14) v2	cgybcgybB151
CsGy6G012510	Cucurbita maxima (Rimu)	cgybcmaB730
CsGy6G012510	Cucurbita maxima (Rimu)	cgybcmaB802
CsGy6G012510	Cucurbita maxima (Rimu)	cgybcmaB820
CsGy6G012510	Cucurbita maxima (Rimu)	cgybcmaB862
CsGy6G012510	Cucurbita moschata (Rifu)	cgybcmoB715
CsGy6G012510	Cucurbita moschata (Rifu)	cgybcmoB780
CsGy6G012510	Cucurbita moschata (Rifu)	cgybcmoB799
CsGy6G012510	Cucurbita moschata (Rifu)	cgybcmoB844
CsGy6G012510	Cucurbita pepo (Zucchini)	cgybcpeB758
CsGy6G012510	Cucurbita pepo (Zucchini)	cgybcpeB811
CsGy6G012510	Cucurbita pepo (Zucchini)	cgybcpeB827
CsGy6G012510	Cucurbita pepo (Zucchini)	cgybcpeB856
CsGy6G012510	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G012510	Cucumber (Chinese Long) v2	cgybcuB284
CsGy6G012510	Bottle gourd (USVL1VR-Ls)	cgyblsiB377
CsGy6G012510	Bottle gourd (USVL1VR-Ls)	cgyblsiB399
CsGy6G012510	Bottle gourd (USVL1VR-Ls)	cgyblsiB412
CsGy6G012510	Melon (DHL92) v3.5.1	cgybmeB448
CsGy6G012510	Melon (DHL92) v3.5.1	cgybmeB425
CsGy6G012510	Melon (DHL92) v3.6.1	cgybmedB422
CsGy6G012510	Melon (DHL92) v3.6.1	cgybmedB446
CsGy6G012510	Watermelon (Charleston Gray)	cgybwcgB393
CsGy6G012510	Watermelon (Charleston Gray)	cgybwcgB401
CsGy6G012510	Watermelon (Charleston Gray)	cgybwcgB427
CsGy6G012510	Watermelon (97103) v1	cgybwmB424
CsGy6G012510	Watermelon (97103) v1	cgybwmB473
CsGy6G012510	Watermelon (97103) v1	cgybwmB478
CsGy6G012510	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G012510	Wild cucumber (PI 183967)	cgybcpiB290