CsGy6G008460.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAACAGTTTCTACTTTTCAGATTACTTATGGATCTCTGTTTTATTTGTCGAGACACTTGTTAAAGGCAAAATTCCTTGTGATGATCATCATGATAATACTCTTGGTGAGTTCCTTTGACTTGGTTTCCTGTGTTTCTTTTATAACAGTATGGGTAGATGTTGGGGATGTTATGTTATTGGGATATTACTTGTGGCATGATCGTAATTACACAGTAACTTCTCAACCCCTTAACCTAGGACGTTGGTTAGACTGGATGGTTAAATAGAGTGGATTAGTGGTTTGAAAGTTGGGCCAAATTTTCGCATGGCTCATAATGATGAGACTGGGGAGAGAAATTGCCTTCTTGAAAGGAAGTTATTGGAATTCCTTTGCATTGTTGTTTTCTCATGATCTGAAATTGAATCCTATCGTTTTTCTATTGCTGATTTAGTGTTTCTTATTATTCGGTATTTTCATTTCAATTTGAGATTCAGTTTCTTTTTATAACTTTGTCATCTGTTCGTAATTGCTCTTTCCAAGACAAGTCCATTTGAGGATTAATTTGATAACCGCTATATGGAAGAAAAAATTATCATTTCTTTACTACCTTTCCTTGTCTACTCTTATTTATGAAGAAGTTCTAATGTGATTATGACAAACATTATGTTAGATCGTGTCAGTAAAATTTACAAGAATTTCCAGGAGATTCCATTACCTCAACACTTGAGGGAAGATGATGATATGCAAAACAATTCTCTGAAGCACTTGGTGCTGCACAAACACGGGTGGAAGGATCATCCTCTTTTTTTAAAGCAGCTTTAACGTGAGCCATTCTCCATTCTCTTTCCAATAGTAGTCATTTCTACATTGGGAGTGTGCATAACAAAAACGGAAAATGAGTTTTATTTTTAAGTGCAACTGTTTGAATTATGGCATACATTCATTTGTATCAAGTTAGGTTTGTGCTGTCTCTTTGAATCAGTTATATATAATTCCTTTGTACTGAAGGAGACTACTTGTTTTCTACAAATCTTTAAATATATCAGGTGGTCTATGGAGTTTGGATCGCAGAGGAGTGGATCTCTGGAAATTCATGTCATGCTTGCTACATATATAATTCCGAGTCACCGGAATTGGTATGTTCGGCCAGAGAATATACTTTAAGTGCTTGTTTGAAGTTTCTTTTTGTTTCCAAGAATTTTTGTTTTTGGTGTTGGTCTGTATGATGACTTCATTTTAGTTACAAATGACATGTTTAGGTGTCTAAATTGTTAATAGAAAGAAGATATAACATTCGTTTTATGAGTATGTACGTAATTTGGCAATGACATTATGTACTGCTGACTGCTGCTATGATATGTTTGCTAACAAGGTCATGAGAAGCATAGTCCAGTACCATGAATGATGGAACTGTTGTTGATTGTCCACTTTGACTGATTTAATAGTATCTTCCAGTATTTTACATGTTGCAGGACGTGACCAGAGATTTGCTTGTATATTAGTGAAGAATTGAAATTTTTTACTCTGAGGGATAAGTTTTCTTTTCAACAATTTTTGAGCTATGAGGTCTAGGTTGTTTTTTTGTGGAGGTACTTGTCTCTTAGAAATCTAATGGATGCTAATGTCCTATTTGATG ATGGTTAACAGTTTCTACTTTTCAGATTACTTATGGATCTCTGTTTTATTTGTCGAGACACTTGTTAAAGGCAAAATTCCTTGTGATGATCATCATGATAATACTCTTGATCGTGTCAGTAAAATTTACAAGAATTTCCAGGAGATTCCATTACCTCAACACTTGAGGGAAGATGATGATATGCAAAACAATTCTCTGAAGCACTTGGTGGTCTATGGAGTTTGGATCGCAGAGGAGTGGATCTCTGGAAATTCATGTCATGCTTGCTACATATATAATTCCGAGTCACCGGAATTGGACGTGACCAGAGATTTGCTTGTATATTAGTGAAGAATTGAAATTTTTTACTCTGAGGGATAAGTTTTCTTTTCAACAATTTTTGAGCTATGAGGTCTAGGTTGTTTTTTTGTGGAGGTACTTGTCTCTTAGAAATCTAATGGATGCTAATGTCCTATTTGATG ATGGTTAACAGTTTCTACTTTTCAGATTACTTATGGATCTCTGTTTTATTTGTCGAGACACTTGTTAAAGGCAAAATTCCTTGTGATGATCATCATGATAATACTCTTGATCGTGTCAGTAAAATTTACAAGAATTTCCAGGAGATTCCATTACCTCAACACTTGAGGGAAGATGATGATATGCAAAACAATTCTCTGAAGCACTTGGTGGTCTATGGAGTTTGGATCGCAGAGGAGTGGATCTCTGGAAATTCATGTCATGCTTGCTACATATATAATTCCGAGTCACCGGAATTGGACGTGACCAGAGATTTGCTTGTATATTAG MVNSFYFSDYLWISVLFVETLVKGKIPCDDHHDNTLDRVSKIYKNFQEIPLPQHLREDDDMQNNSLKHLVVYGVWIAEEWISGNSCHACYIYNSESPELDVTRDLLVY
BLAST of CsGy6G008460.1 vs. NCBI nr
Match: XP_008459732.1 (PREDICTED: Golgi to ER traffic protein 4 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 89.4 bits (220), Expect = 8.4e-15 Identity = 55/110 (50.00%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. NCBI nr
Match: XP_011656863.1 (PREDICTED: Golgi to ER traffic protein 4 homolog [Cucumis sativus] >KGN46554.1 hypothetical protein Csa_6G108520 [Cucumis sativus]) HSP 1 Score: 88.2 bits (217), Expect = 1.9e-14 Identity = 54/110 (49.09%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. NCBI nr
Match: XP_022964498.1 (Golgi to ER traffic protein 4 homolog [Cucurbita moschata]) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 52/110 (47.27%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. NCBI nr
Match: XP_022999910.1 (Golgi to ER traffic protein 4 homolog [Cucurbita maxima]) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 52/110 (47.27%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. NCBI nr
Match: XP_023514316.1 (Golgi to ER traffic protein 4 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 83.6 bits (205), Expect = 4.6e-13 Identity = 51/110 (46.36%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. TAIR10
Match: AT5G63220.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 4.1e-08 Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. TrEMBL
Match: tr|A0A1S3CAY3|A0A1S3CAY3_CUCME (Golgi to ER traffic protein 4 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498774 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.5e-15 Identity = 55/110 (50.00%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. TrEMBL
Match: tr|A0A0A0KCK7|A0A0A0KCK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108520 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 54/110 (49.09%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. TrEMBL
Match: tr|A0A1S3CAV6|A0A1S3CAV6_CUCME (Golgi to ER traffic protein 4 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498774 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 8.8e-13 Identity = 52/106 (49.06%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. TrEMBL
Match: tr|A0A2I4GAQ0|A0A2I4GAQ0_9ROSI (Golgi to ER traffic protein 4 homolog OS=Juglans regia OX=51240 GN=LOC109006193 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11 Identity = 51/110 (46.36%), Postives = 61/110 (55.45%), Query Frame = 0
BLAST of CsGy6G008460.1 vs. TrEMBL
Match: tr|A0A2N9IF80|A0A2N9IF80_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52348 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.9e-11 Identity = 51/110 (46.36%), Postives = 60/110 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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