CsGy4G023900.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G023900.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	17.3 kDa class II heat shock protein-like
Location	Chr4 : 29803780 .. 29804256 (-)
Sequence length	477

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTAGCCAAAATGCCTGGATTCGACCCATTATTTCTAAACGCCCTCCACGACCTTCTGGACTTCTCCGACGAGCCAGGGCAGGGCAGCCACCATGCTCCGTCACGAGCGTACCTGAGGGACGCAAAGGCGATGGCGGCAACTCCAGCAGACGTGGTGGAATATCCAAACTCTTACCAATTCACCATCGACATGCCTGGCCTCACATCAGACCAAATAAAGGTGAAAGTAGAGGATGGGCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTTAAGGAAGGGAAGTTTGTGAGAATGGAGAGGAGGCTTGGAAAATATTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCTGACAAAGTGTCGGCGGCGTACCGGGACGGAGTGCTGTCGGTCACGGTGGAGAAGAAGCCACCGCCGGAGCCCAAAAAGGCTAAAAGTATTGAGGTTCGCGTGGCGTGA

mRNA sequence

ATGGAGGTAGCCAAAATGCCTGGATTCGACCCATTATTTCTAAACGCCCTCCACGACCTTCTGGACTTCTCCGACGAGCCAGGGCAGGGCAGCCACCATGCTCCGTCACGAGCGTACCTGAGGGACGCAAAGGCGATGGCGGCAACTCCAGCAGACGTGGTGGAATATCCAAACTCTTACCAATTCACCATCGACATGCCTGGCCTCACATCAGACCAAATAAAGGTGAAAGTAGAGGATGGGCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTTAAGGAAGGGAAGTTTGTGAGAATGGAGAGGAGGCTTGGAAAATATTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCTGACAAAGTGTCGGCGGCGTACCGGGACGGAGTGCTGTCGGTCACGGTGGAGAAGAAGCCACCGCCGGAGCCCAAAAAGGCTAAAAGTATTGAGGTTCGCGTGGCGTGA

Coding sequence (CDS)

ATGGAGGTAGCCAAAATGCCTGGATTCGACCCATTATTTCTAAACGCCCTCCACGACCTTCTGGACTTCTCCGACGAGCCAGGGCAGGGCAGCCACCATGCTCCGTCACGAGCGTACCTGAGGGACGCAAAGGCGATGGCGGCAACTCCAGCAGACGTGGTGGAATATCCAAACTCTTACCAATTCACCATCGACATGCCTGGCCTCACATCAGACCAAATAAAGGTGAAAGTAGAGGATGGGCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTTAAGGAAGGGAAGTTTGTGAGAATGGAGAGGAGGCTTGGAAAATATTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCTGACAAAGTGTCGGCGGCGTACCGGGACGGAGTGCTGTCGGTCACGGTGGAGAAGAAGCCACCGCCGGAGCCCAAAAAGGCTAAAAGTATTGAGGTTCGCGTGGCGTGA

Protein sequence

MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA

Homology

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BLAST of CsGy4G023900.1 vs. NCBI nr
Match: XP_004141335.1 (PREDICTED: 17.9 kDa class II heat shock protein [Cucumis sativus] >KGN55361.1 hypothetical protein Csa_4G646350 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 2.6e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 158

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BLAST of CsGy4G023900.1 vs. NCBI nr
Match: XP_008452768.1 (PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 8.1e-75
Identity = 147/158 (93.04%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           M+VAKM GFDPLFLNALHDLLDFSDEPGQ SHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MDVAKM-GFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGL SDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKF+LPET
Sbjct: 61  QFTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           AD DK+SAAY+DGVLSVTVEKKPPPEPKKAK+IE+ VA
Sbjct: 121 ADTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHVA 157

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BLAST of CsGy4G023900.1 vs. NCBI nr
Match: XP_022982419.1 (17.1 kDa class II heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 131/157 (83.44%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           ME+A+M G DP+FLNALHDLLDF+DEPGQ +HH PSRAY+RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MELARM-GLDPIFLNALHDLLDFTDEPGQSTHHGPSRAYVRDAKAMAATPADVVEYPNAY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QF+IDMPGL  DQIKV++ED QLVV+GERKRESEK KEGK+V MERRLGKYLKKF LPE 
Sbjct: 61  QFSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKAKEGKYVTMERRLGKYLKKFVLPEA 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
           AD DKVSAAY+DGVLSVTVEKKPPPEPKKAK+IEVRV
Sbjct: 121 ADVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRV 156

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BLAST of CsGy4G023900.1 vs. NCBI nr
Match: XP_022941228.1 (17.1 kDa class II heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 259.2 bits (661), Expect = 8.9e-66
Identity = 130/157 (82.80%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           ME+A+M G DP+FLNALHDLLDF+DE GQ +HH PSRA++RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MELARM-GLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QF+IDMPGL  DQIKV++ED QLVV+GERKRESEKVKEGK+V MERRLGKYLKKF LPE 
Sbjct: 61  QFSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEA 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
           AD DKVSAAY+DGVLSVTVEKKPPPEPKKAK+IEVRV
Sbjct: 121 ADVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRV 156

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BLAST of CsGy4G023900.1 vs. NCBI nr
Match: XP_023524411.1 (17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 3.4e-65
Identity = 129/157 (82.17%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           ME+A+M G DP+FLNALHDLLDF+DE GQ +HH PSRA++RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MELARM-GLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QF+IDMPGL  DQIKV++ED QLVV+GERKRESEKVKEGK+V MERRLGKYLKKF LPE 
Sbjct: 61  QFSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEA 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
           AD DKVSAAY+DGVLSVTVEKKPPPEPK AK+IEVRV
Sbjct: 121 ADVDKVSAAYQDGVLSVTVEKKPPPEPKNAKTIEVRV 156

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BLAST of CsGy4G023900.1 vs. TAIR10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein)

HSP 1 Score: 170.6 bits (431), Expect = 7.6e-43
Identity = 88/160 (55.00%), Postives = 121/160 (75.62%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDF-SDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNS 60
           M++ + P      ++ L D+L+   D   + + + PSR Y+RDAKAMAATPADV+E+PN+
Sbjct: 1   MDLGRFP-----IISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNA 60

Query: 61  YQFTIDMPGLTSDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLP 120
           Y F +DMPG+  D+IKV+VE D  LVVSGER+RE+++ +  K+VRMERR+GK+++KF LP
Sbjct: 61  YAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLP 120

Query: 121 ETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           E AD DK+SA   DGVL VTV+K PPPEPKK K+I+V+VA
Sbjct: 121 ENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

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BLAST of CsGy4G023900.1 vs. TAIR10
Match: AT5G12030.1 (heat shock protein 17.6A)

HSP 1 Score: 165.2 bits (417), Expect = 3.2e-41
Identity = 82/149 (55.03%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 11  PLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLT 70
           P+F + L D+L+  +E  + + + PSRAY+RDAKAMAATPADV+E+P++Y F +DMPG+ 
Sbjct: 9   PIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIK 68

Query: 71  SDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAA 130
            D+I+V++E +  LVVSG+R+R++++ +  KFVRMERR+GK+++KF LP+ AD +K+SAA
Sbjct: 69  GDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAA 128

Query: 131 YRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
             DGVL VT+ K PPPEPKK K+I+V+VA
Sbjct: 129 CNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156

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BLAST of CsGy4G023900.1 vs. TAIR10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 50/114 (43.86%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 50  PADVVEYPNSYQFTIDMPGLTSDQIKVKVEDGQLVV---SGERKRESEKVKEG-KFVRME 109
           P D++E P  Y F +D+PG++   I+V VE+ + +V   +G+RKR+ ++ +EG K++R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 110 RRLGKYL-KKFDLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           RRL + L KKF LPE AD   V+A Y++GVL+V + KK PP+P K K++++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVI-KKLPPQPPKPKTVQIAVS 155

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BLAST of CsGy4G023900.1 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-17
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 9   FDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPG 68
           FDP  L+       F    G    +AP+     D  A      D  E P ++ F  D+PG
Sbjct: 16  FDPFSLDVFDPFEGFLTPSGLA--NAPA----MDVAAFTNAKVDWRETPEAHVFKADLPG 75

Query: 69  LTSDQIKVKVEDGQLV-VSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVS 128
           L  +++KV+VEDG ++ +SGER  E+E+ K  K+ R+ER  GK+ ++F LPE A  +++ 
Sbjct: 76  LRKEEVKVEVEDGNILQISGERSNENEE-KNDKWHRVERSSGKFTRRFRLPENAKMEEIK 135

Query: 129 AAYRDGVLSVTVEKKPPPEPKKAKSIEV 156
           A+  +GVLSVTV K P  +P + KSI++
Sbjct: 136 ASMENGVLSVTVPKVPEKKP-EVKSIDI 155

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BLAST of CsGy4G023900.1 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 81.3 bits (199), Expect = 6.0e-16
Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 41  RDAKAMAATPADVVEYPNSYQFTIDMPGLTSDQIKVKVED-GQLVVSGERKRESEKVKEG 100
           RD  A      D  E P ++ F  D+PGL  +++KV+VED   L +SGER +E+E+ K  
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEE-KND 103

Query: 101 KFVRMERRLGKYLKKFDLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEV 156
           K+ R+ER  GK++++F LPE A  ++V A   +GVL+V V K P  +P + KSI++
Sbjct: 104 KWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKP-QVKSIDI 157

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BLAST of CsGy4G023900.1 vs. Swiss-Prot
Match: sp|P46516|HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.2e-43
Identity = 99/163 (60.74%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQG---SHHAPSRAYLRDAKAMAATPADVVEYP 60
           M++  + GFDPL  N LH +L+ +D+   G   ++  PSRAY+RDA+AMAATPADV E P
Sbjct: 1   MDIDSLMGFDPLLRN-LHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECP 60

Query: 61  NSYQFTIDMPGLTSDQIKVKVE-DGQLVVSGERKRESEKVKEG-KFVRMERRLGKYLKKF 120
           NSY F +DMPGL S  IKV+VE D  LV+SG+R RE E  KEG K+VRMERR+GK++KKF
Sbjct: 61  NSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEE--KEGVKYVRMERRMGKFMKKF 120

Query: 121 DLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
            LPE A+ DK+SA  +DGVL+VTVEK PPPEPKK K+I+V+VA
Sbjct: 121 ALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160

[Close]

BLAST of CsGy4G023900.1 vs. Swiss-Prot
Match: sp|P29830|HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41
Identity = 88/160 (55.00%), Postives = 121/160 (75.62%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDF-SDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNS 60
           M++ + P      ++ L D+L+   D   + + + PSR Y+RDAKAMAATPADV+E+PN+
Sbjct: 1   MDLGRFP-----IISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNA 60

Query: 61  YQFTIDMPGLTSDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLP 120
           Y F +DMPG+  D+IKV+VE D  LVVSGER+RE+++ +  K+VRMERR+GK+++KF LP
Sbjct: 61  YAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLP 120

Query: 121 ETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           E AD DK+SA   DGVL VTV+K PPPEPKK K+I+V+VA
Sbjct: 121 ENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

[Close]

BLAST of CsGy4G023900.1 vs. Swiss-Prot
Match: sp|O82013|HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 92/149 (61.74%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 11  PLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLT 70
           PLF    H L    +  G+ S +APS+ Y+RDAKAMAATPADV EYPNSY F +DMPGL 
Sbjct: 12  PLF----HTLHHMMEAAGEDSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 71

Query: 71  SDQIKVKV-EDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAA 130
           S  IKV+V ED  L++SGERKRE EK +  KF+RMERR+GK+++KF LPE A+ D +SA 
Sbjct: 72  SGDIKVQVEEDNVLLISGERKREEEK-EGAKFIRMERRVGKFMRKFSLPENANTDAISAV 131

Query: 131 YRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
            +DGVL+VTV+K PPPEPKK K+IEV+VA
Sbjct: 132 CQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155

[Close]

BLAST of CsGy4G023900.1 vs. Swiss-Prot
Match: sp|Q01545|HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 89/156 (57.05%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 8   GFDPLFLNALHDLLDFSDE---PGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTI 67
           G +P  L+ + D+LDF+D+    G+     P RAY+RDAKAMAATPADV EYPNSY F  
Sbjct: 12  GLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIA 71

Query: 68  DMPGLTSDQIKVKVEDGQ-LVVSGERKRESEKVKEG-KFVRMERRLGKYLKKFDLPETAD 127
           DMPG+ + +IKV+VED   LVVSGER    +  K+G K++RMERR+GK+++KF LPE A+
Sbjct: 72  DMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENAN 131

Query: 128 ADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
            + ++A Y+DGVL VTVEK PPPEPKK K++EV+VA
Sbjct: 132 VEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167

[Close]

BLAST of CsGy4G023900.1 vs. Swiss-Prot
Match: sp|O81822|HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-40
Identity = 82/149 (55.03%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 11  PLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLT 70
           P+F + L D+L+  +E  + + + PSRAY+RDAKAMAATPADV+E+P++Y F +DMPG+ 
Sbjct: 9   PIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIK 68

Query: 71  SDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAA 130
            D+I+V++E +  LVVSG+R+R++++ +  KFVRMERR+GK+++KF LP+ AD +K+SAA
Sbjct: 69  GDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAA 128

Query: 131 YRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
             DGVL VT+ K PPPEPKK K+I+V+VA
Sbjct: 129 CNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156

[Close]

BLAST of CsGy4G023900.1 vs. TrEMBL
Match: tr|A0A0A0L5D4|A0A0A0L5D4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646350 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 158

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BLAST of CsGy4G023900.1 vs. TrEMBL
Match: tr|A0A1S3BUN1|A0A1S3BUN1_CUCME (17.3 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103493687 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.3e-75
Identity = 147/158 (93.04%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           M+VAKM GFDPLFLNALHDLLDFSDEPGQ SHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MDVAKM-GFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGL SDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKF+LPET
Sbjct: 61  QFTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           AD DK+SAAY+DGVLSVTVEKKPPPEPKKAK+IE+ VA
Sbjct: 121 ADTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHVA 157

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BLAST of CsGy4G023900.1 vs. TrEMBL
Match: tr|A0A059CLA5|A0A059CLA5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00678 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-51
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 8   GFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMP 67
           GFDP  L+ LH+LLD SDEP   SHHAPSRA+LRD KAMAATPADV EYPNSY F +DMP
Sbjct: 7   GFDPTVLDTLHELLDLSDEPDAKSHHAPSRAFLRDKKAMAATPADVKEYPNSYVFVLDMP 66

Query: 68  GLTSDQIKVKVEDG-QLVVSGERKRESEK----VKEG------KFVRMERRLGKYLKKFD 127
           GL  DQIKV+VEDG  LVVSGERKRE EK     K+G      ++V+MERRLGK+LKKF 
Sbjct: 67  GLKPDQIKVQVEDGNMLVVSGERKREKEKDLKDQKDGAGGGLLRYVKMERRLGKFLKKFV 126

Query: 128 LPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           LPE AD +K+SA+Y+DGVL+VTVEK+PPPEPKK K+IEV++A
Sbjct: 127 LPENADPEKISASYQDGVLTVTVEKRPPPEPKKPKTIEVQIA 168

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BLAST of CsGy4G023900.1 vs. TrEMBL
Match: tr|B9RQT8|B9RQT8_RICCO (Heat-shock protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0706500 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.3e-48
Identity = 103/149 (69.13%), Postives = 123/149 (82.55%), Query Frame = 0


Query: 10  DPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGL 69
           DP  L+ LH++L+ SDE  + SHHAPSR Y+RD KAMAATPAD  E PN+Y F IDMPGL
Sbjct: 11  DPGILDVLHEILEVSDET-EKSHHAPSRTYVRDTKAMAATPADAKELPNAYMFVIDMPGL 70

Query: 70  TSDQIKVKVEDG-QLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSA 129
            +DQIKV VEDG  LVVSGERKRE EK +  +++RMERRLGKYLKKF LPE AD++K+SA
Sbjct: 71  KADQIKVHVEDGNMLVVSGERKREKEKDQGVRYIRMERRLGKYLKKFVLPENADSEKISA 130

Query: 130 AYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
            Y+DGVL+VTVEKKPPPEPKK K++EV+V
Sbjct: 131 TYQDGVLTVTVEKKPPPEPKKPKTVEVQV 158

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BLAST of CsGy4G023900.1 vs. TrEMBL
Match: tr|A0A061GKC6|A0A061GKC6_THECC (Heat-shock protein, putative OS=Theobroma cacao OX=3641 GN=TCM_037346 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.3e-48
Identity = 101/155 (65.16%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 5   KMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTI 64
           ++ GFDP  ++ LH+LLDF D+  +   H PSRAY+RDAKAMAATPADV + PN+Y   I
Sbjct: 4   RVMGFDPSVIDTLHELLDFPDDADKSQPH-PSRAYIRDAKAMAATPADVKDCPNAYVVVI 63

Query: 65  DMPGLTSDQIKVKVEDGQ-LVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADA 124
           DMPGL  DQ+KV+VE+G  LVVSGERKRE EK +  KF++MERRLGKYLKKF LPE AD 
Sbjct: 64  DMPGLKQDQLKVQVEEGNFLVVSGERKREKEKDQGVKFIKMERRLGKYLKKFQLPEMADT 123

Query: 125 DKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           +K+SA+Y+DGVL+VTVEKKPPPEPKK +++EV+V+
Sbjct: 124 EKISASYQDGVLTVTVEKKPPPEPKKPRTVEVQVS 157

The following BLAST results are available for this feature:

BLAST of CsGy4G023900.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141335.1	2.6e-81	100.00	PREDICTED: 17.9 kDa class II heat shock protein [Cucumis sativus] >KGN55361.1 hy...	[more]
XP_008452768.1	8.1e-75	93.04	PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo]	[more]
XP_022982419.1	1.1e-66	83.44	17.1 kDa class II heat shock protein-like [Cucurbita maxima]	[more]
XP_022941228.1	8.9e-66	82.80	17.1 kDa class II heat shock protein-like [Cucurbita moschata]	[more]
XP_023524411.1	3.4e-65	82.17	17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G023900.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	7.6e-43	55.00	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	3.2e-41	55.03	heat shock protein 17.6A	[more]
AT1G54050.1	1.7e-18	43.86	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	3.2e-17	37.84	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	6.0e-16	41.38	heat shock protein 18.2	[more]

BLAST of CsGy4G023900.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46516\|HSP21_HELAN	4.2e-43	60.74	17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=...	[more]
sp\|P29830\|HS176_ARATH	1.4e-41	55.00	17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 ...	[more]
sp\|O82013\|HSP21_SOLPE	2.3e-41	61.74	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
sp\|Q01545\|HSP22_IPONI	2.3e-41	57.05	18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1	[more]
sp\|O81822\|HS177_ARATH	5.7e-40	55.03	17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 ...	[more]

BLAST of CsGy4G023900.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5D4\|A0A0A0L5D4_CUCSA	1.7e-81	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646350 PE=3 SV=1	[more]
tr\|A0A1S3BUN1\|A0A1S3BUN1_CUCME	5.3e-75	93.04	17.3 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC10349368...	[more]
tr\|A0A059CLA5\|A0A059CLA5_EUCGR	1.1e-51	69.14	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00678 PE=3 SV...	[more]
tr\|B9RQT8\|B9RQT8_RICCO	4.3e-48	69.13	Heat-shock protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0706500 PE=3 SV...	[more]
tr\|A0A061GKC6\|A0A061GKC6_THECC	7.3e-48	65.16	Heat-shock protein, putative OS=Theobroma cacao OX=3641 GN=TCM_037346 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy4G023900	CsGy4G023900	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G023900.1.CDS.1	CsGy4G023900.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy4G023900.1	CsGy4G023900.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 52..155 e-value: 3.7E-28 score: 97.6
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 42..156 score: 28.166
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 6..156 e-value: 1.7E-33 score: 117.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 33..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..158
None	No IPR available	PANTHER	PTHR11527:SF249	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 3..157
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 52..139 e-value: 5.31426E-30 score: 105.329
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 3..157