CsGy4G023900 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G023900
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	17.3 kDa class II heat shock protein-like
Location	Chr4 : 29803780 .. 29804256 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTAGCCAAAATGCCTGGATTCGACCCATTATTTCTAAACGCCCTCCACGACCTTCTGGACTTCTCCGACGAGCCAGGGCAGGGCAGCCACCATGCTCCGTCACGAGCGTACCTGAGGGACGCAAAGGCGATGGCGGCAACTCCAGCAGACGTGGTGGAATATCCAAACTCTTACCAATTCACCATCGACATGCCTGGCCTCACATCAGACCAAATAAAGGTGAAAGTAGAGGATGGGCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTTAAGGAAGGGAAGTTTGTGAGAATGGAGAGGAGGCTTGGAAAATATTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCTGACAAAGTGTCGGCGGCGTACCGGGACGGAGTGCTGTCGGTCACGGTGGAGAAGAAGCCACCGCCGGAGCCCAAAAAGGCTAAAAGTATTGAGGTTCGCGTGGCGTGA

mRNA sequence

ATGGAGGTAGCCAAAATGCCTGGATTCGACCCATTATTTCTAAACGCCCTCCACGACCTTCTGGACTTCTCCGACGAGCCAGGGCAGGGCAGCCACCATGCTCCGTCACGAGCGTACCTGAGGGACGCAAAGGCGATGGCGGCAACTCCAGCAGACGTGGTGGAATATCCAAACTCTTACCAATTCACCATCGACATGCCTGGCCTCACATCAGACCAAATAAAGGTGAAAGTAGAGGATGGGCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTTAAGGAAGGGAAGTTTGTGAGAATGGAGAGGAGGCTTGGAAAATATTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCTGACAAAGTGTCGGCGGCGTACCGGGACGGAGTGCTGTCGGTCACGGTGGAGAAGAAGCCACCGCCGGAGCCCAAAAAGGCTAAAAGTATTGAGGTTCGCGTGGCGTGA

Coding sequence (CDS)

ATGGAGGTAGCCAAAATGCCTGGATTCGACCCATTATTTCTAAACGCCCTCCACGACCTTCTGGACTTCTCCGACGAGCCAGGGCAGGGCAGCCACCATGCTCCGTCACGAGCGTACCTGAGGGACGCAAAGGCGATGGCGGCAACTCCAGCAGACGTGGTGGAATATCCAAACTCTTACCAATTCACCATCGACATGCCTGGCCTCACATCAGACCAAATAAAGGTGAAAGTAGAGGATGGGCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTTAAGGAAGGGAAGTTTGTGAGAATGGAGAGGAGGCTTGGAAAATATTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCTGACAAAGTGTCGGCGGCGTACCGGGACGGAGTGCTGTCGGTCACGGTGGAGAAGAAGCCACCGCCGGAGCCCAAAAAGGCTAAAAGTATTGAGGTTCGCGTGGCGTGA

Protein sequence

MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA

Homology

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BLAST of CsGy4G023900 vs. NCBI nr
Match: XP_004141335.1 (PREDICTED: 17.9 kDa class II heat shock protein [Cucumis sativus] >KGN55361.1 hypothetical protein Csa_4G646350 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 2.6e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 158

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BLAST of CsGy4G023900 vs. NCBI nr
Match: XP_008452768.1 (PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 8.1e-75
Identity = 147/158 (93.04%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           M+VAKM GFDPLFLNALHDLLDFSDEPGQ SHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MDVAKM-GFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGL SDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKF+LPET
Sbjct: 61  QFTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           AD DK+SAAY+DGVLSVTVEKKPPPEPKKAK+IE+ VA
Sbjct: 121 ADTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHVA 157

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BLAST of CsGy4G023900 vs. NCBI nr
Match: XP_022982419.1 (17.1 kDa class II heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 131/157 (83.44%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           ME+A+M G DP+FLNALHDLLDF+DEPGQ +HH PSRAY+RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MELARM-GLDPIFLNALHDLLDFTDEPGQSTHHGPSRAYVRDAKAMAATPADVVEYPNAY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QF+IDMPGL  DQIKV++ED QLVV+GERKRESEK KEGK+V MERRLGKYLKKF LPE 
Sbjct: 61  QFSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKAKEGKYVTMERRLGKYLKKFVLPEA 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
           AD DKVSAAY+DGVLSVTVEKKPPPEPKKAK+IEVRV
Sbjct: 121 ADVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRV 156

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BLAST of CsGy4G023900 vs. NCBI nr
Match: XP_022941228.1 (17.1 kDa class II heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 259.2 bits (661), Expect = 8.9e-66
Identity = 130/157 (82.80%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           ME+A+M G DP+FLNALHDLLDF+DE GQ +HH PSRA++RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MELARM-GLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QF+IDMPGL  DQIKV++ED QLVV+GERKRESEKVKEGK+V MERRLGKYLKKF LPE 
Sbjct: 61  QFSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEA 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
           AD DKVSAAY+DGVLSVTVEKKPPPEPKKAK+IEVRV
Sbjct: 121 ADVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRV 156

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BLAST of CsGy4G023900 vs. NCBI nr
Match: XP_023524411.1 (17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 3.4e-65
Identity = 129/157 (82.17%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           ME+A+M G DP+FLNALHDLLDF+DE GQ +HH PSRA++RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MELARM-GLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QF+IDMPGL  DQIKV++ED QLVV+GERKRESEKVKEGK+V MERRLGKYLKKF LPE 
Sbjct: 61  QFSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEA 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
           AD DKVSAAY+DGVLSVTVEKKPPPEPK AK+IEVRV
Sbjct: 121 ADVDKVSAAYQDGVLSVTVEKKPPPEPKNAKTIEVRV 156

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BLAST of CsGy4G023900 vs. TAIR10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein)

HSP 1 Score: 170.6 bits (431), Expect = 7.6e-43
Identity = 88/160 (55.00%), Postives = 121/160 (75.62%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDF-SDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNS 60
           M++ + P      ++ L D+L+   D   + + + PSR Y+RDAKAMAATPADV+E+PN+
Sbjct: 1   MDLGRFP-----IISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNA 60

Query: 61  YQFTIDMPGLTSDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLP 120
           Y F +DMPG+  D+IKV+VE D  LVVSGER+RE+++ +  K+VRMERR+GK+++KF LP
Sbjct: 61  YAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLP 120

Query: 121 ETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           E AD DK+SA   DGVL VTV+K PPPEPKK K+I+V+VA
Sbjct: 121 ENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

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BLAST of CsGy4G023900 vs. TAIR10
Match: AT5G12030.1 (heat shock protein 17.6A)

HSP 1 Score: 165.2 bits (417), Expect = 3.2e-41
Identity = 82/149 (55.03%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 11  PLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLT 70
           P+F + L D+L+  +E  + + + PSRAY+RDAKAMAATPADV+E+P++Y F +DMPG+ 
Sbjct: 9   PIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIK 68

Query: 71  SDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAA 130
            D+I+V++E +  LVVSG+R+R++++ +  KFVRMERR+GK+++KF LP+ AD +K+SAA
Sbjct: 69  GDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAA 128

Query: 131 YRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
             DGVL VT+ K PPPEPKK K+I+V+VA
Sbjct: 129 CNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156

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BLAST of CsGy4G023900 vs. TAIR10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 50/114 (43.86%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 50  PADVVEYPNSYQFTIDMPGLTSDQIKVKVEDGQLVV---SGERKRESEKVKEG-KFVRME 109
           P D++E P  Y F +D+PG++   I+V VE+ + +V   +G+RKR+ ++ +EG K++R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 110 RRLGKYL-KKFDLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           RRL + L KKF LPE AD   V+A Y++GVL+V + KK PP+P K K++++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVI-KKLPPQPPKPKTVQIAVS 155

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BLAST of CsGy4G023900 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-17
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 9   FDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPG 68
           FDP  L+       F    G    +AP+     D  A      D  E P ++ F  D+PG
Sbjct: 16  FDPFSLDVFDPFEGFLTPSGLA--NAPA----MDVAAFTNAKVDWRETPEAHVFKADLPG 75

Query: 69  LTSDQIKVKVEDGQLV-VSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVS 128
           L  +++KV+VEDG ++ +SGER  E+E+ K  K+ R+ER  GK+ ++F LPE A  +++ 
Sbjct: 76  LRKEEVKVEVEDGNILQISGERSNENEE-KNDKWHRVERSSGKFTRRFRLPENAKMEEIK 135

Query: 129 AAYRDGVLSVTVEKKPPPEPKKAKSIEV 156
           A+  +GVLSVTV K P  +P + KSI++
Sbjct: 136 ASMENGVLSVTVPKVPEKKP-EVKSIDI 155

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BLAST of CsGy4G023900 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 81.3 bits (199), Expect = 6.0e-16
Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 41  RDAKAMAATPADVVEYPNSYQFTIDMPGLTSDQIKVKVED-GQLVVSGERKRESEKVKEG 100
           RD  A      D  E P ++ F  D+PGL  +++KV+VED   L +SGER +E+E+ K  
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEE-KND 103

Query: 101 KFVRMERRLGKYLKKFDLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEV 156
           K+ R+ER  GK++++F LPE A  ++V A   +GVL+V V K P  +P + KSI++
Sbjct: 104 KWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKP-QVKSIDI 157

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BLAST of CsGy4G023900 vs. Swiss-Prot
Match: sp|P46516|HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.2e-43
Identity = 99/163 (60.74%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQG---SHHAPSRAYLRDAKAMAATPADVVEYP 60
           M++  + GFDPL  N LH +L+ +D+   G   ++  PSRAY+RDA+AMAATPADV E P
Sbjct: 1   MDIDSLMGFDPLLRN-LHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECP 60

Query: 61  NSYQFTIDMPGLTSDQIKVKVE-DGQLVVSGERKRESEKVKEG-KFVRMERRLGKYLKKF 120
           NSY F +DMPGL S  IKV+VE D  LV+SG+R RE E  KEG K+VRMERR+GK++KKF
Sbjct: 61  NSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEE--KEGVKYVRMERRMGKFMKKF 120

Query: 121 DLPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
            LPE A+ DK+SA  +DGVL+VTVEK PPPEPKK K+I+V+VA
Sbjct: 121 ALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160

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BLAST of CsGy4G023900 vs. Swiss-Prot
Match: sp|P29830|HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41
Identity = 88/160 (55.00%), Postives = 121/160 (75.62%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDF-SDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNS 60
           M++ + P      ++ L D+L+   D   + + + PSR Y+RDAKAMAATPADV+E+PN+
Sbjct: 1   MDLGRFP-----IISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNA 60

Query: 61  YQFTIDMPGLTSDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLP 120
           Y F +DMPG+  D+IKV+VE D  LVVSGER+RE+++ +  K+VRMERR+GK+++KF LP
Sbjct: 61  YAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLP 120

Query: 121 ETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           E AD DK+SA   DGVL VTV+K PPPEPKK K+I+V+VA
Sbjct: 121 ENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

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BLAST of CsGy4G023900 vs. Swiss-Prot
Match: sp|O82013|HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 92/149 (61.74%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 11  PLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLT 70
           PLF    H L    +  G+ S +APS+ Y+RDAKAMAATPADV EYPNSY F +DMPGL 
Sbjct: 12  PLF----HTLHHMMEAAGEDSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 71

Query: 71  SDQIKVKV-EDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAA 130
           S  IKV+V ED  L++SGERKRE EK +  KF+RMERR+GK+++KF LPE A+ D +SA 
Sbjct: 72  SGDIKVQVEEDNVLLISGERKREEEK-EGAKFIRMERRVGKFMRKFSLPENANTDAISAV 131

Query: 131 YRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
            +DGVL+VTV+K PPPEPKK K+IEV+VA
Sbjct: 132 CQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155

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BLAST of CsGy4G023900 vs. Swiss-Prot
Match: sp|Q01545|HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 89/156 (57.05%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 8   GFDPLFLNALHDLLDFSDE---PGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTI 67
           G +P  L+ + D+LDF+D+    G+     P RAY+RDAKAMAATPADV EYPNSY F  
Sbjct: 12  GLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIA 71

Query: 68  DMPGLTSDQIKVKVEDGQ-LVVSGERKRESEKVKEG-KFVRMERRLGKYLKKFDLPETAD 127
           DMPG+ + +IKV+VED   LVVSGER    +  K+G K++RMERR+GK+++KF LPE A+
Sbjct: 72  DMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENAN 131

Query: 128 ADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
            + ++A Y+DGVL VTVEK PPPEPKK K++EV+VA
Sbjct: 132 VEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167

[Close]

BLAST of CsGy4G023900 vs. Swiss-Prot
Match: sp|O81822|HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-40
Identity = 82/149 (55.03%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 11  PLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGLT 70
           P+F + L D+L+  +E  + + + PSRAY+RDAKAMAATPADV+E+P++Y F +DMPG+ 
Sbjct: 9   PIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIK 68

Query: 71  SDQIKVKVE-DGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSAA 130
            D+I+V++E +  LVVSG+R+R++++ +  KFVRMERR+GK+++KF LP+ AD +K+SAA
Sbjct: 69  GDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAA 128

Query: 131 YRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
             DGVL VT+ K PPPEPKK K+I+V+VA
Sbjct: 129 CNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156

[Close]

BLAST of CsGy4G023900 vs. TrEMBL
Match: tr|A0A0A0L5D4|A0A0A0L5D4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646350 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 158

[Close]

BLAST of CsGy4G023900 vs. TrEMBL
Match: tr|A0A1S3BUN1|A0A1S3BUN1_CUCME (17.3 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103493687 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.3e-75
Identity = 147/158 (93.04%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60
           M+VAKM GFDPLFLNALHDLLDFSDEPGQ SHHAPSRAYLRDAKAMAATPADVVEYPNSY
Sbjct: 1   MDVAKM-GFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGL SDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKF+LPET
Sbjct: 61  QFTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPET 120

Query: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           AD DK+SAAY+DGVLSVTVEKKPPPEPKKAK+IE+ VA
Sbjct: 121 ADTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHVA 157

[Close]

BLAST of CsGy4G023900 vs. TrEMBL
Match: tr|A0A059CLA5|A0A059CLA5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00678 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-51
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 8   GFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMP 67
           GFDP  L+ LH+LLD SDEP   SHHAPSRA+LRD KAMAATPADV EYPNSY F +DMP
Sbjct: 7   GFDPTVLDTLHELLDLSDEPDAKSHHAPSRAFLRDKKAMAATPADVKEYPNSYVFVLDMP 66

Query: 68  GLTSDQIKVKVEDG-QLVVSGERKRESEK----VKEG------KFVRMERRLGKYLKKFD 127
           GL  DQIKV+VEDG  LVVSGERKRE EK     K+G      ++V+MERRLGK+LKKF 
Sbjct: 67  GLKPDQIKVQVEDGNMLVVSGERKREKEKDLKDQKDGAGGGLLRYVKMERRLGKFLKKFV 126

Query: 128 LPETADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           LPE AD +K+SA+Y+DGVL+VTVEK+PPPEPKK K+IEV++A
Sbjct: 127 LPENADPEKISASYQDGVLTVTVEKRPPPEPKKPKTIEVQIA 168

[Close]

BLAST of CsGy4G023900 vs. TrEMBL
Match: tr|B9RQT8|B9RQT8_RICCO (Heat-shock protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0706500 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.3e-48
Identity = 103/149 (69.13%), Postives = 123/149 (82.55%), Query Frame = 0


Query: 10  DPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTIDMPGL 69
           DP  L+ LH++L+ SDE  + SHHAPSR Y+RD KAMAATPAD  E PN+Y F IDMPGL
Sbjct: 11  DPGILDVLHEILEVSDET-EKSHHAPSRTYVRDTKAMAATPADAKELPNAYMFVIDMPGL 70

Query: 70  TSDQIKVKVEDG-QLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADADKVSA 129
            +DQIKV VEDG  LVVSGERKRE EK +  +++RMERRLGKYLKKF LPE AD++K+SA
Sbjct: 71  KADQIKVHVEDGNMLVVSGERKREKEKDQGVRYIRMERRLGKYLKKFVLPENADSEKISA 130

Query: 130 AYRDGVLSVTVEKKPPPEPKKAKSIEVRV 158
            Y+DGVL+VTVEKKPPPEPKK K++EV+V
Sbjct: 131 TYQDGVLTVTVEKKPPPEPKKPKTVEVQV 158

[Close]

BLAST of CsGy4G023900 vs. TrEMBL
Match: tr|A0A061GKC6|A0A061GKC6_THECC (Heat-shock protein, putative OS=Theobroma cacao OX=3641 GN=TCM_037346 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.3e-48
Identity = 101/155 (65.16%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 5   KMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSYQFTI 64
           ++ GFDP  ++ LH+LLDF D+  +   H PSRAY+RDAKAMAATPADV + PN+Y   I
Sbjct: 4   RVMGFDPSVIDTLHELLDFPDDADKSQPH-PSRAYIRDAKAMAATPADVKDCPNAYVVVI 63

Query: 65  DMPGLTSDQIKVKVEDGQ-LVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADA 124
           DMPGL  DQ+KV+VE+G  LVVSGERKRE EK +  KF++MERRLGKYLKKF LPE AD 
Sbjct: 64  DMPGLKQDQLKVQVEEGNFLVVSGERKREKEKDQGVKFIKMERRLGKYLKKFQLPEMADT 123

Query: 125 DKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 159
           +K+SA+Y+DGVL+VTVEKKPPPEPKK +++EV+V+
Sbjct: 124 EKISASYQDGVLTVTVEKKPPPEPKKPRTVEVQVS 157

The following BLAST results are available for this feature:

BLAST of CsGy4G023900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141335.1	2.6e-81	100.00	PREDICTED: 17.9 kDa class II heat shock protein [Cucumis sativus] >KGN55361.1 hy...	[more]
XP_008452768.1	8.1e-75	93.04	PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo]	[more]
XP_022982419.1	1.1e-66	83.44	17.1 kDa class II heat shock protein-like [Cucurbita maxima]	[more]
XP_022941228.1	8.9e-66	82.80	17.1 kDa class II heat shock protein-like [Cucurbita moschata]	[more]
XP_023524411.1	3.4e-65	82.17	17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G023900 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	7.6e-43	55.00	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	3.2e-41	55.03	heat shock protein 17.6A	[more]
AT1G54050.1	1.7e-18	43.86	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	3.2e-17	37.84	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	6.0e-16	41.38	heat shock protein 18.2	[more]

BLAST of CsGy4G023900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46516\|HSP21_HELAN	4.2e-43	60.74	17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=...	[more]
sp\|P29830\|HS176_ARATH	1.4e-41	55.00	17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 ...	[more]
sp\|O82013\|HSP21_SOLPE	2.3e-41	61.74	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
sp\|Q01545\|HSP22_IPONI	2.3e-41	57.05	18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1	[more]
sp\|O81822\|HS177_ARATH	5.7e-40	55.03	17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 ...	[more]

BLAST of CsGy4G023900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5D4\|A0A0A0L5D4_CUCSA	1.7e-81	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646350 PE=3 SV=1	[more]
tr\|A0A1S3BUN1\|A0A1S3BUN1_CUCME	5.3e-75	93.04	17.3 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC10349368...	[more]
tr\|A0A059CLA5\|A0A059CLA5_EUCGR	1.1e-51	69.14	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00678 PE=3 SV...	[more]
tr\|B9RQT8\|B9RQT8_RICCO	4.3e-48	69.13	Heat-shock protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0706500 PE=3 SV...	[more]
tr\|A0A061GKC6\|A0A061GKC6_THECC	7.3e-48	65.16	Heat-shock protein, putative OS=Theobroma cacao OX=3641 GN=TCM_037346 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G023900.1	CsGy4G023900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 52..155 e-value: 3.7E-28 score: 97.6
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 42..156 score: 28.166
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 6..156 e-value: 1.7E-33 score: 117.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 33..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..158
None	No IPR available	PANTHER	PTHR11527:SF249	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 3..157
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 52..139 e-value: 5.31426E-30 score: 105.329
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 3..157

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G023900	Cucumber (Gy14) v2	cgybcgybB022
CsGy4G023900	Cucumber (Gy14) v2	cgybcgybB138
CsGy4G023900	Cucurbita maxima (Rimu)	cgybcmaB465
CsGy4G023900	Cucurbita maxima (Rimu)	cgybcmaB473
CsGy4G023900	Cucurbita maxima (Rimu)	cgybcmaB476
CsGy4G023900	Cucurbita maxima (Rimu)	cgybcmaB514
CsGy4G023900	Cucurbita moschata (Rifu)	cgybcmoB433
CsGy4G023900	Cucurbita moschata (Rifu)	cgybcmoB441
CsGy4G023900	Cucurbita moschata (Rifu)	cgybcmoB445
CsGy4G023900	Cucurbita moschata (Rifu)	cgybcmoB473
CsGy4G023900	Cucurbita moschata (Rifu)	cgybcmoB475
CsGy4G023900	Cucurbita pepo (Zucchini)	cgybcpeB480
CsGy4G023900	Cucurbita pepo (Zucchini)	cgybcpeB498
CsGy4G023900	Cucurbita pepo (Zucchini)	cgybcpeB557
CsGy4G023900	Cucurbita pepo (Zucchini)	cgybcpeB539
CsGy4G023900	Cucurbita pepo (Zucchini)	cgybcpeB562
CsGy4G023900	Cucumber (Chinese Long) v2	cgybcuB155
CsGy4G023900	Cucumber (Chinese Long) v2	cgybcuB166
CsGy4G023900	Cucumber (Chinese Long) v2	cgybcuB193
CsGy4G023900	Bottle gourd (USVL1VR-Ls)	cgyblsiB255
CsGy4G023900	Bottle gourd (USVL1VR-Ls)	cgyblsiB269
CsGy4G023900	Bottle gourd (USVL1VR-Ls)	cgyblsiB276
CsGy4G023900	Melon (DHL92) v3.5.1	cgybmeB237
CsGy4G023900	Melon (DHL92) v3.5.1	cgybmeB240
CsGy4G023900	Melon (DHL92) v3.5.1	cgybmeB270
CsGy4G023900	Melon (DHL92) v3.6.1	cgybmedB237
CsGy4G023900	Melon (DHL92) v3.6.1	cgybmedB241
CsGy4G023900	Melon (DHL92) v3.6.1	cgybmedB267
CsGy4G023900	Watermelon (Charleston Gray)	cgybwcgB248
CsGy4G023900	Watermelon (Charleston Gray)	cgybwcgB274
CsGy4G023900	Watermelon (Charleston Gray)	cgybwcgB291
CsGy4G023900	Watermelon (97103) v1	cgybwmB266
CsGy4G023900	Watermelon (97103) v1	cgybwmB280
CsGy4G023900	Watermelon (97103) v1	cgybwmB297
CsGy4G023900	Wild cucumber (PI 183967)	cgybcpiB158
CsGy4G023900	Wild cucumber (PI 183967)	cgybcpiB169
CsGy4G023900	Wild cucumber (PI 183967)	cgybcpiB197
CsGy4G023900	Silver-seed gourd	carcgybB0103
CsGy4G023900	Silver-seed gourd	carcgybB0633
CsGy4G023900	Silver-seed gourd	carcgybB0767
CsGy4G023900	Cucumber (Chinese Long) v3	cgybcucB162
CsGy4G023900	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G023900	Cucumber (Chinese Long) v3	cgybcucB197
CsGy4G023900	Watermelon (97103) v2	cgybwmbB275
CsGy4G023900	Watermelon (97103) v2	cgybwmbB291
CsGy4G023900	Watermelon (97103) v2	cgybwmbB315
CsGy4G023900	Wax gourd	cgybwgoB398
CsGy4G023900	Wax gourd	cgybwgoB400
CsGy4G023900	Wax gourd	cgybwgoB406