CsGy3G017760.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCATTCCCAAAATACCCCTGTTTTCGGTGGAGCCTTGAGCGCAACCGAGGATGACGGGAGGGGTAGAAAGAGAATTAGAGAAGGTAAATTTTTCTCTGACGAGATTTCCCTCAGCCAAGGTACCGTCAGCGTAGAAGTAGGAGTAGTGGCAGAGGCGATTTTGATCACAAGAAGTGGGAAGAGTAAAATCTGGAATTCGGGGTTTGCAGATGGGGTGATTACAAGGGAGGAGAGAAAAAGAAGAGGAGAGAGAAGGATCAAAGGTGGCGGTTTTAGGCTTGGGCAAGGGGGGCAATCTTTTCTTAACTTTTTTGTCATGACATTGAATCCAAGAGAGTTGGCTGCCGGTGTCTAGAACCAAGTCAGTGGGCTGTGGCGGCGTTCCGATCGGAAGAGAGACGACGAGGGCAGAGGAGGAGTATTTGAAAGGAAGCTTGAAGGGGCCATGGGATGATGGCTTTTTGACGTAA ATGATTCATTCCCAAAATACCCCTGTTTTCGGTGGAGCCTTGAGCGCAACCGAGGATGACGGGAGGGGTAGAAAGAGAATTAGAGAAGGTAAATTTTTCTCTGACGAGATTTCCCTCAGCCAAGGTACCGTCAGCGTAGAAGTAGGAGTAGTGGCAGAGGCGATTTTGATCACAAGAAGTGGGAAGAGTAAAATCTGGAATTCGGGGTTTGCAGATGGGGTGATTACAAGGGAGGAGAGAAAAAGAAGAGGAGAGAGAAGGATCAAAGGTGGCGAGAGTTGGCTGCCGGTGTCTAGAACCAAGTCAGTGGGCTGTGGCGGCGTTCCGATCGGAAGAGAGACGACGAGGGCAGAGGAGGAGTATTTGAAAGGAAGCTTGAAGGGGCCATGGGATGATGGCTTTTTGACGTAA ATGATTCATTCCCAAAATACCCCTGTTTTCGGTGGAGCCTTGAGCGCAACCGAGGATGACGGGAGGGGTAGAAAGAGAATTAGAGAAGGTAAATTTTTCTCTGACGAGATTTCCCTCAGCCAAGGTACCGTCAGCGTAGAAGTAGGAGTAGTGGCAGAGGCGATTTTGATCACAAGAAGTGGGAAGAGTAAAATCTGGAATTCGGGGTTTGCAGATGGGGTGATTACAAGGGAGGAGAGAAAAAGAAGAGGAGAGAGAAGGATCAAAGGTGGCGAGAGTTGGCTGCCGGTGTCTAGAACCAAGTCAGTGGGCTGTGGCGGCGTTCCGATCGGAAGAGAGACGACGAGGGCAGAGGAGGAGTATTTGAAAGGAAGCTTGAAGGGGCCATGGGATGATGGCTTTTTGACGTAA MIHSQNTPVFGGALSATEDDGRGRKRIREGKFFSDEISLSQGTVSVEVGVVAEAILITRSGKSKIWNSGFADGVITREERKRRGERRIKGGESWLPVSRTKSVGCGGVPIGRETTRAEEEYLKGSLKGPWDDGFLT
BLAST of CsGy3G017760.1 vs. NCBI nr
Match: KGN57462.1 (hypothetical protein Csa_3G188345 [Cucumis sativus]) HSP 1 Score: 177.2 bits (448), Expect = 3.8e-41 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of CsGy3G017760.1 vs. NCBI nr
Match: KYP75964.1 (hypothetical protein KK1_020177, partial [Cajanus cajan]) HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of CsGy3G017760.1 vs. NCBI nr
Match: PON89095.1 (hypothetical protein TorRG33x02_151700 [Trema orientalis]) HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of CsGy3G017760.1 vs. TrEMBL
Match: tr|A0A0A0LA25|A0A0A0LA25_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G188345 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.5e-41 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of CsGy3G017760.1 vs. TrEMBL
Match: tr|A0A151U9G1|A0A151U9G1_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_020177 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of CsGy3G017760.1 vs. TrEMBL
Match: tr|A0A2P5EUA6|A0A2P5EUA6_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_151700 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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