CsGy3G006640.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G006640.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Phosphatidylserine decarboxylase proenzyme 2
Location	Chr3 : 5702725 .. 5703299 (-)
Sequence length	420

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGTGGAATCTGCAAAAGATATTCCACGTTTCATTTTATCTTTCAAGGATCAAATCATTATGATTGAGGTGAAACACCCTTCGGATTATTTCAAGATATTTAATAATTTCTTTATAAGAGAGTTGAAGCCTGGTGTTAGACCAATTGTACACGTGGAATGTGGTGATGTTGCAGTTTGTGCTGCTGTTTGCTGACTAATGGCATTTAAGTTATTTGATGACAGCCTAAGGGGTGGAACTTTTCAGTCAAAGGTCCTTTAAGGAAAAATATAAGTGCAAGTGCTTTTAAGGATGGGTCGTTGGTGATATTTCAATTGGCACCACAAAACTTTCATCGCTTTCATTTTCCAGTCTCTGGTTTCATTGAACAAATTGTAGACATACCTGGATGCTTGTATTTTGTTAATCCAATTGCTGTCAATAGCAAGTATTGCAATGTCTTCACAGAGAATAAGCATTCAGTAGCTATAATTTTAATGTCCGATTTCGGCAAGGTTGCTTTTGTTGCAATGGGAAATACCTTGGTTGGCAGCTTAACCTTCAAAAGAAAGGGTAGGGAGATACAGTAA

mRNA sequence

ATGGATTCTGTGGAATCTGCAAAAGATATTCCACGTTTCATTTTATCTTTCAAGGATCAAATCATTATGATTGAGCCTAAGGGGTGGAACTTTTCAGTCAAAGGTCCTTTAAGGAAAAATATAAGTGCAAGTGCTTTTAAGGATGGGTCGTTGGTGATATTTCAATTGGCACCACAAAACTTTCATCGCTTTCATTTTCCAGTCTCTGGTTTCATTGAACAAATTGTAGACATACCTGGATGCTTGTATTTTGTTAATCCAATTGCTGTCAATAGCAAGTATTGCAATGTCTTCACAGAGAATAAGCATTCAGTAGCTATAATTTTAATGTCCGATTTCGGCAAGGTTGCTTTTGTTGCAATGGGAAATACCTTGGTTGGCAGCTTAACCTTCAAAAGAAAGGGTAGGGAGATACAGTAA

Coding sequence (CDS)

ATGGATTCTGTGGAATCTGCAAAAGATATTCCACGTTTCATTTTATCTTTCAAGGATCAAATCATTATGATTGAGCCTAAGGGGTGGAACTTTTCAGTCAAAGGTCCTTTAAGGAAAAATATAAGTGCAAGTGCTTTTAAGGATGGGTCGTTGGTGATATTTCAATTGGCACCACAAAACTTTCATCGCTTTCATTTTCCAGTCTCTGGTTTCATTGAACAAATTGTAGACATACCTGGATGCTTGTATTTTGTTAATCCAATTGCTGTCAATAGCAAGTATTGCAATGTCTTCACAGAGAATAAGCATTCAGTAGCTATAATTTTAATGTCCGATTTCGGCAAGGTTGCTTTTGTTGCAATGGGAAATACCTTGGTTGGCAGCTTAACCTTCAAAAGAAAGGGTAGGGAGATACAGTAA

Protein sequence

MDSVESAKDIPRFILSFKDQIIMIEPKGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNTLVGSLTFKRKGREIQ

Homology

[Close]

BLAST of CsGy3G006640.1 vs. NCBI nr
Match: XP_008455245.1 (PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44
Identity = 109/196 (55.61%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 394 MDSVESAKDIPSFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPGVRPIAHVECDDVA 453

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L ++ISASAF DG+LVIF+LAPQ++HRF
Sbjct: 454 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASAFMDGTLVIFRLAPQDYHRF 513

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 514 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISTSDFGKVAFVAIGAT 573

[Close]

BLAST of CsGy3G006640.1 vs. NCBI nr
Match: XP_011658767.1 (PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 106/189 (56.08%), Postives = 117/189 (61.90%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDI  FI SFKDQI M E                                   
Sbjct: 393 MDSVESAKDISHFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPGVRPIAHVECDDVA 452

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L ++ISASAF DG+LVIF+LAPQ++HRF
Sbjct: 453 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASAFMDGTLVIFRLAPQDYHRF 512

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 134
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 513 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISTSDFGKVAFVAIGAT 572

[Close]

BLAST of CsGy3G006640.1 vs. NCBI nr
Match: XP_022963616.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata])

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 108/192 (56.25%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 388 MDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPDVRPIAHVECDDVA 447

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L + ISA AF DG+LVIF+LAPQ++HRF
Sbjct: 448 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGAFMDGTLVIFRLAPQDYHRF 507

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 136
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 508 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISSSDFGKVAFVAIGAT 567

[Close]

BLAST of CsGy3G006640.1 vs. NCBI nr
Match: XP_023553974.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 108/192 (56.25%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 388 MDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPDVRPIAHVECDDVA 447

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L + ISA AF DG+LVIF+LAPQ++HRF
Sbjct: 448 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGAFMDGTLVIFRLAPQDYHRF 507

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 136
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 508 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISSSDFGKVAFVAIGAT 567

[Close]

BLAST of CsGy3G006640.1 vs. NCBI nr
Match: XP_022154387.1 (phosphatidylserine decarboxylase proenzyme 2-like [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 9.3e-43
Identity = 103/189 (54.50%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQ+ + E                                   
Sbjct: 390 MDSVESAKDIPHFIESFKDQLNLSEVKHPLEHFKTFNEFFIRELKSGVRPVAHVECDDIA 449

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L K+I ASAF DG+LVIF+LAPQ++HRF
Sbjct: 450 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGKDIHASAFTDGALVIFRLAPQDYHRF 509

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 134
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  +DFGKVAFVA+G T
Sbjct: 510 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISSADFGKVAFVAIGAT 569

[Close]

BLAST of CsGy3G006640.1 vs. TAIR10
Match: AT5G57190.1 (phosphatidylserine decarboxylase 2)

HSP 1 Score: 161.0 bits (406), Expect = 5.3e-40
Identity = 93/193 (48.19%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M SVESA+ IPRF+  FKDQI M E                                   
Sbjct: 379 MSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVA 438

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS++G L KN++ +AF DGSLVIF+LAPQ++HRF
Sbjct: 439 VCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDYHRF 498

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 138
           H PVSG IEQ VD+ G LY VNPIAVNSKYCNVFTENK +VAII  ++FGKVAFVA+G T
Sbjct: 499 HVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKVAFVAIGAT 558

[Close]

BLAST of CsGy3G006640.1 vs. TAIR10
Match: AT4G25970.1 (phosphatidylserine decarboxylase 3)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-36
Identity = 85/190 (44.74%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M+SVESA++IP F+  FKDQI M E                                   
Sbjct: 378 MNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFVRELKPGARPIACMDQDDVA 437

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS+KG L  ++ + AF DGSLVIF+LAPQ++HRF
Sbjct: 438 VSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDAFLDGSLVIFRLAPQDYHRF 497

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 135
           H PVSG IE+ V++ G LY VNPIAVNSKYCNVFTENK ++ II  ++FGKVAFVA+G T
Sbjct: 498 HSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTIVIISTAEFGKVAFVAIGAT 557

[Close]

BLAST of CsGy3G006640.1 vs. Swiss-Prot
Match: sp|F4KAK5|PSD2_ARATH (Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=PSD2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-39
Identity = 93/193 (48.19%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M SVESA+ IPRF+  FKDQI M E                                   
Sbjct: 379 MSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVA 438

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS++G L KN++ +AF DGSLVIF+LAPQ++HRF
Sbjct: 439 VCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDYHRF 498

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 138
           H PVSG IEQ VD+ G LY VNPIAVNSKYCNVFTENK +VAII  ++FGKVAFVA+G T
Sbjct: 499 HVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKVAFVAIGAT 558

[Close]

BLAST of CsGy3G006640.1 vs. Swiss-Prot
Match: sp|Q5JN42|PSD2_ORYSJ (Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PSD2 PE=3 SV=3)

HSP 1 Score: 151.0 bits (380), Expect = 9.9e-36
Identity = 86/190 (45.26%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M S ESAKDIP+F+  FKDQI + E                                   
Sbjct: 361 MSSPESAKDIPKFLELFKDQINLDEVKDPLESFKTFNEFFVRQLKPGARPIACYEQDTIA 420

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS++G L K++ + A  +GSLVIF+LAPQ++HRF
Sbjct: 421 TCAADSRLMTFSSVDESTRLWIKGRKFSIEGLLGKDVHSDALCNGSLVIFRLAPQDYHRF 480

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 135
           H PVSG +E+ V+IPGCLY VNPIAVNSKYCNVFTENK  V+II  S+FGKVAFVA+G T
Sbjct: 481 HVPVSGTLEKFVEIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTSEFGKVAFVAIGAT 540

[Close]

BLAST of CsGy3G006640.1 vs. Swiss-Prot
Match: sp|A4GNA8|PSD3_ARATH (Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=PSD3 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.2e-35
Identity = 85/190 (44.74%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M+SVESA++IP F+  FKDQI M E                                   
Sbjct: 378 MNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFVRELKPGARPIACMDQDDVA 437

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS+KG L  ++ + AF DGSLVIF+LAPQ++HRF
Sbjct: 438 VSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDAFLDGSLVIFRLAPQDYHRF 497

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 135
           H PVSG IE+ V++ G LY VNPIAVNSKYCNVFTENK ++ II  ++FGKVAFVA+G T
Sbjct: 498 HSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTIVIISTAEFGKVAFVAIGAT 557

[Close]

BLAST of CsGy3G006640.1 vs. Swiss-Prot
Match: sp|Q5AK66|PSD2_CANAL (Phosphatidylserine decarboxylase proenzyme 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PSD2 PE=3 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 4   VESAKDIPRFILSFKDQIIMIEPKGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHR 63
           V S  D    +    D+   +  KG  F++   L  N  +      +L IF+LAPQ++HR
Sbjct: 809 VTSPADCRSVVFESIDKATQLWIKGAGFTIP-KLIHNDHSMRVSSYTLGIFRLAPQDYHR 868

Query: 64  FHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGN 123
           FH PV G IE I  I G  Y VNP+A+ S+  +VF EN  ++  I   DFG + F+A+G 
Sbjct: 869 FHSPVDGVIESIKHIDGEYYTVNPMAIRSE-LDVFGENVRTIVTIKTKDFGNIYFIAVGA 928

Query: 124 TLVGSLTF-KRKGREI 139
            +VGS+   K  G EI
Sbjct: 929 MMVGSIVLTKDTGYEI 942

[Close]

BLAST of CsGy3G006640.1 vs. Swiss-Prot
Match: sp|O14111|PSD3_SCHPO (Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psd3 PE=3 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-15
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 27  KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVN 86
           KG  F+V+  L  +  A  F  GS+ I +LAPQ++HRFH PV+G I  I  I G  Y VN
Sbjct: 787 KGTEFTVERLLGYSNEAQRFVGGSICISRLAPQDYHRFHSPVNGCIGPITKIEGQYYTVN 846

Query: 87  PIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNTLVGS 129
           P+A+ S Y +VF EN   +  I  ++FGKV  VA+G  +VGS
Sbjct: 847 PMAIRS-YLDVFGENVRVLIPIDSNEFGKVMLVAVGAMMVGS 887

[Close]

BLAST of CsGy3G006640.1 vs. TrEMBL
Match: tr|A0A1S3C020|A0A1S3C020_CUCME (Phosphatidylserine decarboxylase proenzyme 2 OS=Cucumis melo OX=3656 GN=LOC103495456 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 109/196 (55.61%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 394 MDSVESAKDIPSFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPGVRPIAHVECDDVA 453

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L ++ISASAF DG+LVIF+LAPQ++HRF
Sbjct: 454 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASAFMDGTLVIFRLAPQDYHRF 513

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 514 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISTSDFGKVAFVAIGAT 573

[Close]

BLAST of CsGy3G006640.1 vs. TrEMBL
Match: tr|M7ZPC1|M7ZPC1_TRIUA (C2 domain-containing protein C31G5.15 OS=Triticum urartu OX=4572 GN=TRIUR3_24044 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP-------KGWNFSVKGPLRKNISASAFKDGSLVI 60
           M+S ESAKDIP+F+  F  QI M E        KG  FS++G L  +   +AFK+GSLVI
Sbjct: 331 MNSPESAKDIPKFLELFAGQINMDETKDPIESFKGRKFSIEGLLGADAHHNAFKNGSLVI 390

Query: 61  FQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDF 120
           F+LAPQ++HRFH PVSG +E+ VDIPGCLY VNPIAVNSKYCNVFTENK  ++II  S+F
Sbjct: 391 FRLAPQDYHRFHVPVSGTVEKFVDIPGCLYTVNPIAVNSKYCNVFTENKRVISIISTSEF 450

Query: 121 GKVAFVAMGNTLVGSLTFKRK 135
           GKVAFVA+G T+VGS+TF +K
Sbjct: 451 GKVAFVAIGATMVGSITFVKK 471

[Close]

BLAST of CsGy3G006640.1 vs. TrEMBL
Match: tr|A0A1D6G430|A0A1D6G430_MAIZE (Phosphatidylserine decarboxylase proenzyme 3 OS=Zea mays OX=4577 GN=100275554 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 87/141 (61.70%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP-------KGWNFSVKGPLRKNISASAFKDGSLVI 60
           M+S+ESAKDIP+F+  FKDQI M E        KG  FS++G L  +  ++A  +GSLVI
Sbjct: 381 MNSLESAKDIPKFLELFKDQINMDEIKDPVESFKGRKFSIEGLLGTSAHSNALSNGSLVI 440

Query: 61  FQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDF 120
           F+LAPQ++HRFH PVSG +E+ V+IPGCLY VNPIAVNSKYCNVFTENK  V++I  S+F
Sbjct: 441 FRLAPQDYHRFHVPVSGTVEKFVEIPGCLYTVNPIAVNSKYCNVFTENKRVVSMISTSEF 500

Query: 121 GKVAFVAMGNTLVGSLTFKRK 135
           GKVAFVA+G T+VGS+TF +K
Sbjct: 501 GKVAFVAIGATMVGSITFLKK 521

[Close]

BLAST of CsGy3G006640.1 vs. TrEMBL
Match: tr|V7BTS2|V7BTS2_PHAVU (Phosphatidylserine decarboxylase proenzyme 2 OS=Phaseolus vulgaris OX=3885 GN=PSD2 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.4e-39
Identity = 96/196 (48.98%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDS ES+ DIP+FI SFKDQI + E                                   
Sbjct: 376 MDSPESSADIPKFIESFKDQINLAEVKYPLEHFKTFNEFFIRELKPGSRPIASAESADIA 435

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L K++ +SAF DG++VIF+LAPQ++HRF
Sbjct: 436 VCAADCRLSAFKSVDDSKRFWIKGRKFSVQGLLGKDMCSSAFVDGTMVIFRLAPQDYHRF 495

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSG +EQ VDIPGCLY VNPIAVNSKYCNVFTENK  V+II   +FGKVAFVA+G T
Sbjct: 496 HFPVSGIVEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTENFGKVAFVAIGAT 555

[Close]

BLAST of CsGy3G006640.1 vs. TrEMBL
Match: tr|A0A1S3VJK6|A0A1S3VJK6_VIGRR (Phosphatidylserine decarboxylase proenzyme 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775841 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 95/196 (48.47%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDS ES+ DIP+FI SFKDQI + E                                   
Sbjct: 405 MDSPESSADIPKFIESFKDQINLAEVKYPLEQFKTFNEFFIRELKPGSRPIASAERDDIA 464

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L K++ +SAF DG++V+F+LAPQ++HRF
Sbjct: 465 VCAADCRLSAFKSVDDSKRFWIKGRKFSVQGLLGKDMCSSAFVDGTMVVFRLAPQDYHRF 524

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSG +EQ VDIPGCLY VNPIAVNSKYCNVFTENK  V+II   DFGKVAFVA+G T
Sbjct: 525 HFPVSGTVEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTVDFGKVAFVAIGAT 584

The following BLAST results are available for this feature:

BLAST of CsGy3G006640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455245.1	2.2e-44	55.61	PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo]	[more]
XP_011658767.1	2.5e-43	56.08	PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus]	[more]
XP_022963616.1	4.2e-43	56.25	phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata]	[more]
XP_023553974.1	4.2e-43	56.25	phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022154387.1	9.3e-43	54.50	phosphatidylserine decarboxylase proenzyme 2-like [Momordica charantia]	[more]

BLAST of CsGy3G006640.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57190.1	5.3e-40	48.19	phosphatidylserine decarboxylase 2	[more]
AT4G25970.1	1.2e-36	44.74	phosphatidylserine decarboxylase 3	[more]

BLAST of CsGy3G006640.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4KAK5\|PSD2_ARATH	9.5e-39	48.19	Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q5JN42\|PSD2_ORYSJ	9.9e-36	45.26	Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica OX=...	[more]
sp\|A4GNA8\|PSD3_ARATH	2.2e-35	44.74	Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q5AK66\|PSD2_CANAL	1.9e-15	38.24	Phosphatidylserine decarboxylase proenzyme 2 OS=Candida albicans (strain SC5314 ...	[more]
sp\|O14111\|PSD3_SCHPO	4.3e-15	46.08	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of CsGy3G006640.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C020\|A0A1S3C020_CUCME	1.5e-44	55.61	Phosphatidylserine decarboxylase proenzyme 2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|M7ZPC1\|M7ZPC1_TRIUA	4.9e-40	62.41	C2 domain-containing protein C31G5.15 OS=Triticum urartu OX=4572 GN=TRIUR3_24044...	[more]
tr\|A0A1D6G430\|A0A1D6G430_MAIZE	4.9e-40	61.70	Phosphatidylserine decarboxylase proenzyme 3 OS=Zea mays OX=4577 GN=100275554 PE...	[more]
tr\|V7BTS2\|V7BTS2_PHAVU	5.4e-39	48.98	Phosphatidylserine decarboxylase proenzyme 2 OS=Phaseolus vulgaris OX=3885 GN=PS...	[more]
tr\|A0A1S3VJK6\|A0A1S3VJK6_VIGRR	1.6e-38	48.47	Phosphatidylserine decarboxylase proenzyme 2 OS=Vigna radiata var. radiata OX=39...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0008654	phospholipid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004609	phosphatidylserine decarboxylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003817	PS_Dcarbxylase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008654	phospholipid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004609	phosphatidylserine decarboxylase activity
molecular_function	GO:0005509	calcium ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G006640	CsGy3G006640	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G006640.1.CDS.2	CsGy3G006640.1.CDS.2	CDS
CsGy3G006640.1.CDS.1	CsGy3G006640.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G006640.1	CsGy3G006640.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003817	Phosphatidylserine decarboxylase-related	PFAM	PF02666	PS_Dcarbxylase	coord: 26..138 e-value: 1.5E-20 score: 73.5
IPR003817	Phosphatidylserine decarboxylase-related	PANTHER	PTHR10067	PHOSPHATIDYLSERINE DECARBOXYLASE	coord: 27..134
None	No IPR available	PANTHER	PTHR10067:SF2	PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME 2	coord: 27..134