CsGy3G006640 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G006640
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Phosphatidylserine decarboxylase proenzyme 2
Location	Chr3 : 5702725 .. 5703299 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGTGGAATCTGCAAAAGATATTCCACGTTTCATTTTATCTTTCAAGGATCAAATCATTATGATTGAGGTGAAACACCCTTCGGATTATTTCAAGATATTTAATAATTTCTTTATAAGAGAGTTGAAGCCTGGTGTTAGACCAATTGTACACGTGGAATGTGGTGATGTTGCAGTTTGTGCTGCTGTTTGCTGACTAATGGCATTTAAGTTATTTGATGACAGCCTAAGGGGTGGAACTTTTCAGTCAAAGGTCCTTTAAGGAAAAATATAAGTGCAAGTGCTTTTAAGGATGGGTCGTTGGTGATATTTCAATTGGCACCACAAAACTTTCATCGCTTTCATTTTCCAGTCTCTGGTTTCATTGAACAAATTGTAGACATACCTGGATGCTTGTATTTTGTTAATCCAATTGCTGTCAATAGCAAGTATTGCAATGTCTTCACAGAGAATAAGCATTCAGTAGCTATAATTTTAATGTCCGATTTCGGCAAGGTTGCTTTTGTTGCAATGGGAAATACCTTGGTTGGCAGCTTAACCTTCAAAAGAAAGGGTAGGGAGATACAGTAA

mRNA sequence

ATGGATTCTGTGGAATCTGCAAAAGATATTCCACGTTTCATTTTATCTTTCAAGGATCAAATCATTATGATTGAGCCTAAGGGGTGGAACTTTTCAGTCAAAGGTCCTTTAAGGAAAAATATAAGTGCAAGTGCTTTTAAGGATGGGTCGTTGGTGATATTTCAATTGGCACCACAAAACTTTCATCGCTTTCATTTTCCAGTCTCTGGTTTCATTGAACAAATTGTAGACATACCTGGATGCTTGTATTTTGTTAATCCAATTGCTGTCAATAGCAAGTATTGCAATGTCTTCACAGAGAATAAGCATTCAGTAGCTATAATTTTAATGTCCGATTTCGGCAAGGTTGCTTTTGTTGCAATGGGAAATACCTTGGTTGGCAGCTTAACCTTCAAAAGAAAGGGTAGGGAGATACAGTAA

Coding sequence (CDS)

ATGGATTCTGTGGAATCTGCAAAAGATATTCCACGTTTCATTTTATCTTTCAAGGATCAAATCATTATGATTGAGCCTAAGGGGTGGAACTTTTCAGTCAAAGGTCCTTTAAGGAAAAATATAAGTGCAAGTGCTTTTAAGGATGGGTCGTTGGTGATATTTCAATTGGCACCACAAAACTTTCATCGCTTTCATTTTCCAGTCTCTGGTTTCATTGAACAAATTGTAGACATACCTGGATGCTTGTATTTTGTTAATCCAATTGCTGTCAATAGCAAGTATTGCAATGTCTTCACAGAGAATAAGCATTCAGTAGCTATAATTTTAATGTCCGATTTCGGCAAGGTTGCTTTTGTTGCAATGGGAAATACCTTGGTTGGCAGCTTAACCTTCAAAAGAAAGGGTAGGGAGATACAGTAA

Protein sequence

MDSVESAKDIPRFILSFKDQIIMIEPKGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNTLVGSLTFKRKGREIQ

Homology

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BLAST of CsGy3G006640 vs. NCBI nr
Match: XP_008455245.1 (PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44
Identity = 109/196 (55.61%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 394 MDSVESAKDIPSFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPGVRPIAHVECDDVA 453

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L ++ISASAF DG+LVIF+LAPQ++HRF
Sbjct: 454 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASAFMDGTLVIFRLAPQDYHRF 513

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 514 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISTSDFGKVAFVAIGAT 573

[Close]

BLAST of CsGy3G006640 vs. NCBI nr
Match: XP_011658767.1 (PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 106/189 (56.08%), Postives = 117/189 (61.90%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDI  FI SFKDQI M E                                   
Sbjct: 393 MDSVESAKDISHFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPGVRPIAHVECDDVA 452

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L ++ISASAF DG+LVIF+LAPQ++HRF
Sbjct: 453 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASAFMDGTLVIFRLAPQDYHRF 512

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 134
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 513 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISTSDFGKVAFVAIGAT 572

[Close]

BLAST of CsGy3G006640 vs. NCBI nr
Match: XP_022963616.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata])

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 108/192 (56.25%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 388 MDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPDVRPIAHVECDDVA 447

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L + ISA AF DG+LVIF+LAPQ++HRF
Sbjct: 448 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGAFMDGTLVIFRLAPQDYHRF 507

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 136
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 508 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISSSDFGKVAFVAIGAT 567

[Close]

BLAST of CsGy3G006640 vs. NCBI nr
Match: XP_023553974.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 108/192 (56.25%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 388 MDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPDVRPIAHVECDDVA 447

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L + ISA AF DG+LVIF+LAPQ++HRF
Sbjct: 448 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGAFMDGTLVIFRLAPQDYHRF 507

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 136
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 508 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISSSDFGKVAFVAIGAT 567

[Close]

BLAST of CsGy3G006640 vs. NCBI nr
Match: XP_022154387.1 (phosphatidylserine decarboxylase proenzyme 2-like [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 9.3e-43
Identity = 103/189 (54.50%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQ+ + E                                   
Sbjct: 390 MDSVESAKDIPHFIESFKDQLNLSEVKHPLEHFKTFNEFFIRELKSGVRPVAHVECDDIA 449

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L K+I ASAF DG+LVIF+LAPQ++HRF
Sbjct: 450 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGKDIHASAFTDGALVIFRLAPQDYHRF 509

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 134
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  +DFGKVAFVA+G T
Sbjct: 510 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISSADFGKVAFVAIGAT 569

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BLAST of CsGy3G006640 vs. TAIR10
Match: AT5G57190.1 (phosphatidylserine decarboxylase 2)

HSP 1 Score: 161.0 bits (406), Expect = 5.3e-40
Identity = 93/193 (48.19%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M SVESA+ IPRF+  FKDQI M E                                   
Sbjct: 379 MSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVA 438

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS++G L KN++ +AF DGSLVIF+LAPQ++HRF
Sbjct: 439 VCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDYHRF 498

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 138
           H PVSG IEQ VD+ G LY VNPIAVNSKYCNVFTENK +VAII  ++FGKVAFVA+G T
Sbjct: 499 HVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKVAFVAIGAT 558

[Close]

BLAST of CsGy3G006640 vs. TAIR10
Match: AT4G25970.1 (phosphatidylserine decarboxylase 3)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-36
Identity = 85/190 (44.74%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M+SVESA++IP F+  FKDQI M E                                   
Sbjct: 378 MNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFVRELKPGARPIACMDQDDVA 437

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS+KG L  ++ + AF DGSLVIF+LAPQ++HRF
Sbjct: 438 VSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDAFLDGSLVIFRLAPQDYHRF 497

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 135
           H PVSG IE+ V++ G LY VNPIAVNSKYCNVFTENK ++ II  ++FGKVAFVA+G T
Sbjct: 498 HSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTIVIISTAEFGKVAFVAIGAT 557

[Close]

BLAST of CsGy3G006640 vs. Swiss-Prot
Match: sp|F4KAK5|PSD2_ARATH (Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=PSD2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-39
Identity = 93/193 (48.19%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M SVESA+ IPRF+  FKDQI M E                                   
Sbjct: 379 MSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVA 438

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS++G L KN++ +AF DGSLVIF+LAPQ++HRF
Sbjct: 439 VCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDYHRF 498

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 138
           H PVSG IEQ VD+ G LY VNPIAVNSKYCNVFTENK +VAII  ++FGKVAFVA+G T
Sbjct: 499 HVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKVAFVAIGAT 558

[Close]

BLAST of CsGy3G006640 vs. Swiss-Prot
Match: sp|Q5JN42|PSD2_ORYSJ (Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PSD2 PE=3 SV=3)

HSP 1 Score: 151.0 bits (380), Expect = 9.9e-36
Identity = 86/190 (45.26%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M S ESAKDIP+F+  FKDQI + E                                   
Sbjct: 361 MSSPESAKDIPKFLELFKDQINLDEVKDPLESFKTFNEFFVRQLKPGARPIACYEQDTIA 420

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS++G L K++ + A  +GSLVIF+LAPQ++HRF
Sbjct: 421 TCAADSRLMTFSSVDESTRLWIKGRKFSIEGLLGKDVHSDALCNGSLVIFRLAPQDYHRF 480

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 135
           H PVSG +E+ V+IPGCLY VNPIAVNSKYCNVFTENK  V+II  S+FGKVAFVA+G T
Sbjct: 481 HVPVSGTLEKFVEIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTSEFGKVAFVAIGAT 540

[Close]

BLAST of CsGy3G006640 vs. Swiss-Prot
Match: sp|A4GNA8|PSD3_ARATH (Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=PSD3 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.2e-35
Identity = 85/190 (44.74%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           M+SVESA++IP F+  FKDQI M E                                   
Sbjct: 378 MNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFVRELKPGARPIACMDQDDVA 437

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FS+KG L  ++ + AF DGSLVIF+LAPQ++HRF
Sbjct: 438 VSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDAFLDGSLVIFRLAPQDYHRF 497

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 135
           H PVSG IE+ V++ G LY VNPIAVNSKYCNVFTENK ++ II  ++FGKVAFVA+G T
Sbjct: 498 HSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTIVIISTAEFGKVAFVAIGAT 557

[Close]

BLAST of CsGy3G006640 vs. Swiss-Prot
Match: sp|Q5AK66|PSD2_CANAL (Phosphatidylserine decarboxylase proenzyme 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PSD2 PE=3 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 4   VESAKDIPRFILSFKDQIIMIEPKGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHR 63
           V S  D    +    D+   +  KG  F++   L  N  +      +L IF+LAPQ++HR
Sbjct: 809 VTSPADCRSVVFESIDKATQLWIKGAGFTIP-KLIHNDHSMRVSSYTLGIFRLAPQDYHR 868

Query: 64  FHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGN 123
           FH PV G IE I  I G  Y VNP+A+ S+  +VF EN  ++  I   DFG + F+A+G 
Sbjct: 869 FHSPVDGVIESIKHIDGEYYTVNPMAIRSE-LDVFGENVRTIVTIKTKDFGNIYFIAVGA 928

Query: 124 TLVGSLTF-KRKGREI 139
            +VGS+   K  G EI
Sbjct: 929 MMVGSIVLTKDTGYEI 942

[Close]

BLAST of CsGy3G006640 vs. Swiss-Prot
Match: sp|O14111|PSD3_SCHPO (Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psd3 PE=3 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-15
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 27  KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVN 86
           KG  F+V+  L  +  A  F  GS+ I +LAPQ++HRFH PV+G I  I  I G  Y VN
Sbjct: 787 KGTEFTVERLLGYSNEAQRFVGGSICISRLAPQDYHRFHSPVNGCIGPITKIEGQYYTVN 846

Query: 87  PIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNTLVGS 129
           P+A+ S Y +VF EN   +  I  ++FGKV  VA+G  +VGS
Sbjct: 847 PMAIRS-YLDVFGENVRVLIPIDSNEFGKVMLVAVGAMMVGS 887

[Close]

BLAST of CsGy3G006640 vs. TrEMBL
Match: tr|A0A1S3C020|A0A1S3C020_CUCME (Phosphatidylserine decarboxylase proenzyme 2 OS=Cucumis melo OX=3656 GN=LOC103495456 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 109/196 (55.61%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDSVESAKDIP FI SFKDQI M E                                   
Sbjct: 394 MDSVESAKDIPSFIESFKDQINMNEVKHPLEYFKTFNEFFIRELKPGVRPIAHVECDDVA 453

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L ++ISASAF DG+LVIF+LAPQ++HRF
Sbjct: 454 VCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASAFMDGTLVIFRLAPQDYHRF 513

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSGFIEQIVDIPGCLY VNPIAVNSKYCNVFTENK SVAII  SDFGKVAFVA+G T
Sbjct: 514 HFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSVAIISTSDFGKVAFVAIGAT 573

[Close]

BLAST of CsGy3G006640 vs. TrEMBL
Match: tr|M7ZPC1|M7ZPC1_TRIUA (C2 domain-containing protein C31G5.15 OS=Triticum urartu OX=4572 GN=TRIUR3_24044 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP-------KGWNFSVKGPLRKNISASAFKDGSLVI 60
           M+S ESAKDIP+F+  F  QI M E        KG  FS++G L  +   +AFK+GSLVI
Sbjct: 331 MNSPESAKDIPKFLELFAGQINMDETKDPIESFKGRKFSIEGLLGADAHHNAFKNGSLVI 390

Query: 61  FQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDF 120
           F+LAPQ++HRFH PVSG +E+ VDIPGCLY VNPIAVNSKYCNVFTENK  ++II  S+F
Sbjct: 391 FRLAPQDYHRFHVPVSGTVEKFVDIPGCLYTVNPIAVNSKYCNVFTENKRVISIISTSEF 450

Query: 121 GKVAFVAMGNTLVGSLTFKRK 135
           GKVAFVA+G T+VGS+TF +K
Sbjct: 451 GKVAFVAIGATMVGSITFVKK 471

[Close]

BLAST of CsGy3G006640 vs. TrEMBL
Match: tr|A0A1D6G430|A0A1D6G430_MAIZE (Phosphatidylserine decarboxylase proenzyme 3 OS=Zea mays OX=4577 GN=100275554 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 87/141 (61.70%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP-------KGWNFSVKGPLRKNISASAFKDGSLVI 60
           M+S+ESAKDIP+F+  FKDQI M E        KG  FS++G L  +  ++A  +GSLVI
Sbjct: 381 MNSLESAKDIPKFLELFKDQINMDEIKDPVESFKGRKFSIEGLLGTSAHSNALSNGSLVI 440

Query: 61  FQLAPQNFHRFHFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDF 120
           F+LAPQ++HRFH PVSG +E+ V+IPGCLY VNPIAVNSKYCNVFTENK  V++I  S+F
Sbjct: 441 FRLAPQDYHRFHVPVSGTVEKFVEIPGCLYTVNPIAVNSKYCNVFTENKRVVSMISTSEF 500

Query: 121 GKVAFVAMGNTLVGSLTFKRK 135
           GKVAFVA+G T+VGS+TF +K
Sbjct: 501 GKVAFVAIGATMVGSITFLKK 521

[Close]

BLAST of CsGy3G006640 vs. TrEMBL
Match: tr|V7BTS2|V7BTS2_PHAVU (Phosphatidylserine decarboxylase proenzyme 2 OS=Phaseolus vulgaris OX=3885 GN=PSD2 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.4e-39
Identity = 96/196 (48.98%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDS ES+ DIP+FI SFKDQI + E                                   
Sbjct: 376 MDSPESSADIPKFIESFKDQINLAEVKYPLEHFKTFNEFFIRELKPGSRPIASAESADIA 435

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L K++ +SAF DG++VIF+LAPQ++HRF
Sbjct: 436 VCAADCRLSAFKSVDDSKRFWIKGRKFSVQGLLGKDMCSSAFVDGTMVIFRLAPQDYHRF 495

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSG +EQ VDIPGCLY VNPIAVNSKYCNVFTENK  V+II   +FGKVAFVA+G T
Sbjct: 496 HFPVSGIVEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTENFGKVAFVAIGAT 555

[Close]

BLAST of CsGy3G006640 vs. TrEMBL
Match: tr|A0A1S3VJK6|A0A1S3VJK6_VIGRR (Phosphatidylserine decarboxylase proenzyme 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775841 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 95/196 (48.47%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 1   MDSVESAKDIPRFILSFKDQIIMIEP---------------------------------- 60
           MDS ES+ DIP+FI SFKDQI + E                                   
Sbjct: 405 MDSPESSADIPKFIESFKDQINLAEVKYPLEQFKTFNEFFIRELKPGSRPIASAERDDIA 464

Query: 61  ----------------------KGWNFSVKGPLRKNISASAFKDGSLVIFQLAPQNFHRF 120
                                 KG  FSV+G L K++ +SAF DG++V+F+LAPQ++HRF
Sbjct: 465 VCAADCRLSAFKSVDDSKRFWIKGRKFSVQGLLGKDMCSSAFVDGTMVVFRLAPQDYHRF 524

Query: 121 HFPVSGFIEQIVDIPGCLYFVNPIAVNSKYCNVFTENKHSVAIILMSDFGKVAFVAMGNT 140
           HFPVSG +EQ VDIPGCLY VNPIAVNSKYCNVFTENK  V+II   DFGKVAFVA+G T
Sbjct: 525 HFPVSGTVEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTVDFGKVAFVAIGAT 584

The following BLAST results are available for this feature:

BLAST of CsGy3G006640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455245.1	2.2e-44	55.61	PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo]	[more]
XP_011658767.1	2.5e-43	56.08	PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus]	[more]
XP_022963616.1	4.2e-43	56.25	phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata]	[more]
XP_023553974.1	4.2e-43	56.25	phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022154387.1	9.3e-43	54.50	phosphatidylserine decarboxylase proenzyme 2-like [Momordica charantia]	[more]

BLAST of CsGy3G006640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57190.1	5.3e-40	48.19	phosphatidylserine decarboxylase 2	[more]
AT4G25970.1	1.2e-36	44.74	phosphatidylserine decarboxylase 3	[more]

BLAST of CsGy3G006640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4KAK5\|PSD2_ARATH	9.5e-39	48.19	Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q5JN42\|PSD2_ORYSJ	9.9e-36	45.26	Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica OX=...	[more]
sp\|A4GNA8\|PSD3_ARATH	2.2e-35	44.74	Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q5AK66\|PSD2_CANAL	1.9e-15	38.24	Phosphatidylserine decarboxylase proenzyme 2 OS=Candida albicans (strain SC5314 ...	[more]
sp\|O14111\|PSD3_SCHPO	4.3e-15	46.08	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of CsGy3G006640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C020\|A0A1S3C020_CUCME	1.5e-44	55.61	Phosphatidylserine decarboxylase proenzyme 2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|M7ZPC1\|M7ZPC1_TRIUA	4.9e-40	62.41	C2 domain-containing protein C31G5.15 OS=Triticum urartu OX=4572 GN=TRIUR3_24044...	[more]
tr\|A0A1D6G430\|A0A1D6G430_MAIZE	4.9e-40	61.70	Phosphatidylserine decarboxylase proenzyme 3 OS=Zea mays OX=4577 GN=100275554 PE...	[more]
tr\|V7BTS2\|V7BTS2_PHAVU	5.4e-39	48.98	Phosphatidylserine decarboxylase proenzyme 2 OS=Phaseolus vulgaris OX=3885 GN=PS...	[more]
tr\|A0A1S3VJK6\|A0A1S3VJK6_VIGRR	1.6e-38	48.47	Phosphatidylserine decarboxylase proenzyme 2 OS=Vigna radiata var. radiata OX=39...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008654	phospholipid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004609	phosphatidylserine decarboxylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003817	PS_Dcarbxylase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008654	phospholipid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004609	phosphatidylserine decarboxylase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G006640.1	CsGy3G006640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003817	Phosphatidylserine decarboxylase-related	PFAM	PF02666	PS_Dcarbxylase	coord: 26..138 e-value: 1.5E-20 score: 73.5
IPR003817	Phosphatidylserine decarboxylase-related	PANTHER	PTHR10067	PHOSPHATIDYLSERINE DECARBOXYLASE	coord: 27..134
None	No IPR available	PANTHER	PTHR10067:SF2	PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME 2	coord: 27..134

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G006640	Cucurbita maxima (Rimu)	cgybcmaB341
CsGy3G006640	Cucurbita maxima (Rimu)	cgybcmaB416
CsGy3G006640	Cucurbita moschata (Rifu)	cgybcmoB313
CsGy3G006640	Cucurbita moschata (Rifu)	cgybcmoB393
CsGy3G006640	Cucurbita pepo (Zucchini)	cgybcpeB328
CsGy3G006640	Cucurbita pepo (Zucchini)	cgybcpeB369
CsGy3G006640	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G006640	Bottle gourd (USVL1VR-Ls)	cgyblsiB183
CsGy3G006640	Melon (DHL92) v3.5.1	cgybmeB211
CsGy3G006640	Melon (DHL92) v3.6.1	cgybmedB203
CsGy3G006640	Watermelon (Charleston Gray)	cgybwcgB174
CsGy3G006640	Watermelon (97103) v1	cgybwmB211
CsGy3G006640	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G006640	Silver-seed gourd	carcgybB0008
CsGy3G006640	Silver-seed gourd	carcgybB0565
CsGy3G006640	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G006640	Watermelon (97103) v2	cgybwmbB174
CsGy3G006640	Wax gourd	cgybwgoB219