CsGy2G027040.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTATGTCTGATGATGAGCTTTTCTGAGAGCTTCAATGGTGTCAAAGAGAGAGAATTATTATCCCTTCAAAAGAGTGCCAAAAGTGGCTTCATGTTCTTGACTAGAGGCCCTCTGCCCATGCTGCCATTATGGAAGAGGTTCTTTGCTGACCATGACAAACTGTTCTCTATCCATGTGCATGCCCTTCCAGGCTATGAGCTAAATCTGTCCACGAGTTCTGTTTTCTACAGACGGGCAGATCCTCAGTCAGGTATTTCTTTTTCTTTCTTCAATCTGTTTGGTATTGATATTGTACCATGTTGAGTGTGAACACAAGTGGACATTACCTATTGATAGAAACATGTGTGAAGGAGTGATTTGTGAGGTCCACATTTTCTTTCACTTGTTTTTGTTTTGTAGCTATAGAGGTACTCCACATGGACAGTAACAAGAACTCAATTAGAAAGTCATGCAACACTTGGAGACCTTAA ATGCTATGTCTGATGATGAGCTTTTCTGAGAGCTTCAATGGTGTCAAAGAGAGAGAATTATTATCCCTTCAAAAGAGTGCCAAAAGTGGCTTCATGTTCTTGACTAGAGGCCCTCTGCCCATGCTGCCATTATGGAAGAGGTTCTTTGCTGACCATGACAAACTGTTCTCTATCCATGTGCATGCCCTTCCAGGCTATGAGCTAAATCTGTCCACGAGTTCTGTTTTCTACAGACGGGCAGATCCTCAGTCAGCTATAGAGGTACTCCACATGGACAGTAACAAGAACTCAATTAGAAAGTCATGCAACACTTGGAGACCTTAA ATGCTATGTCTGATGATGAGCTTTTCTGAGAGCTTCAATGGTGTCAAAGAGAGAGAATTATTATCCCTTCAAAAGAGTGCCAAAAGTGGCTTCATGTTCTTGACTAGAGGCCCTCTGCCCATGCTGCCATTATGGAAGAGGTTCTTTGCTGACCATGACAAACTGTTCTCTATCCATGTGCATGCCCTTCCAGGCTATGAGCTAAATCTGTCCACGAGTTCTGTTTTCTACAGACGGGCAGATCCTCAGTCAGCTATAGAGGTACTCCACATGGACAGTAACAAGAACTCAATTAGAAAGTCATGCAACACTTGGAGACCTTAA MLCLMMSFSESFNGVKERELLSLQKSAKSGFMFLTRGPLPMLPLWKRFFADHDKLFSIHVHALPGYELNLSTSSVFYRRADPQSAIEVLHMDSNKNSIRKSCNTWRP
BLAST of CsGy2G027040.1 vs. NCBI nr
Match: KGN63385.1 (hypothetical protein Csa_2G435490 [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. NCBI nr
Match: XP_008452225.1 (PREDICTED: uncharacterized protein LOC103493307 isoform X1 [Cucumis melo]) HSP 1 Score: 102.4 bits (254), Expect = 9.5e-19 Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. NCBI nr
Match: XP_008452226.1 (PREDICTED: uncharacterized protein LOC103493307 isoform X2 [Cucumis melo]) HSP 1 Score: 102.4 bits (254), Expect = 9.5e-19 Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. NCBI nr
Match: XP_011650576.1 (PREDICTED: uncharacterized protein LOC101215808 isoform X1 [Cucumis sativus] >KGN56275.1 hypothetical protein Csa_3G110720 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 2.1e-18 Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. NCBI nr
Match: XP_011650577.1 (PREDICTED: uncharacterized protein LOC101215808 isoform X2 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 2.1e-18 Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TAIR10
Match: AT1G10280.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 79.0 bits (193), Expect = 2.0e-15 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TAIR10
Match: AT3G21310.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 75.9 bits (185), Expect = 1.7e-14 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TAIR10
Match: AT1G51770.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TAIR10
Match: AT1G68380.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11 Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TAIR10
Match: AT5G25970.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 65.1 bits (157), Expect = 3.0e-11 Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TrEMBL
Match: tr|A0A0A0LNA6|A0A0A0LNA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G435490 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 7.1e-55 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TrEMBL
Match: tr|A0A1S3BTE2|A0A1S3BTE2_CUCME (uncharacterized protein LOC103493307 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493307 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.3e-19 Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TrEMBL
Match: tr|A0A1S3BSR4|A0A1S3BSR4_CUCME (uncharacterized protein LOC103493307 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493307 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.3e-19 Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TrEMBL
Match: tr|A0A0A0L2Q4|A0A0A0L2Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110720 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18 Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of CsGy2G027040.1 vs. TrEMBL
Match: tr|A0A2P5E2V0|A0A2P5E2V0_9ROSA (Glycosyl transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_234950 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16 Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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