CsGy2G009750.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATACACTTTGCAGTCTCTATGCATTCAACCATGAGAATAAGCCCATTTATTTGACGACATTTTTGTCATTCATCTATGCTTTAGGGCATTTCTTAACTGAATACTTGATATATCATACCATGTCCCATTGCAAATATGATGAGTGACGACTGTTGGCATCTTTGCAGGTATGATTGCTGGAATTAAGTCCATCCCTATCCTGTATTAAAATTTATTTGGACTTTTACATCTTTTTCTCTATGGTCTTTTCTCCTTTGTTATTTTTAAATCTTGAACTAAAAGAATTTCTTTTTACAAGAATTTATCTGGTTGATCCTATATACTACTATCATTATTAGATGATTAATTAGTTTACATCCATCTACTATCTCATGACACGATAATTTTAATTAGTTTGACATCTCAGTCAATAGGACAGTGATTTTATTCCCATTCGCAGTATTGTGTCTATTCTAAAACTGATTTTGCTACTCAATAGAAGGAATAATGCTTGTTGTTTTGCCTTTTGTTTTAGACATCAAACATAAAGATCACTTGTTCATGTTGAACTTTCTGTTAACAGGCACATCAATATAATATGGATGCTTCTCTAGTGGAATTCACACTAAAGAGTTCACCCTAAAGATTCTTAATATGCTCAAATTTAATATGCGAACTTATTTTCTTCGATCCAGGGCACTGAATATACAAAGAACATTAGATTAGCTTGAAACACTCTCAATATCACTGTCTACCCAATATGATTTAACCTGCTTTTGTTAGTTCGGTATAATGCCATGTTGATGATGACACTCTTCTAGCTTGTACTAAAAATGGAACTAATAATAATATCATAAGAAACAGGAGCATGTTTTTTTGCCGGGGAAACCACCAGATTGGCAAAATTTTGTAATTGGGATCATAACTTTGTTACTTACCAATTCAACCATTACTTTTATAGAGGAGAACAATGGTGGAAATGTTGCAGCCTCTCTCATGGCTCATCTTGCTCCCAAAGCTAA ATGGATACACTTTGCAGTCTCTATGCATTCAACCATGAGAATAAGCCCATTTATTTGACGACATTTTTGTCATTCATCTATGCTTTAGGGCATTTCTTAACTGAATACTTGATATATCATACCATGTCCCATTGCAAATATGATGAAGGAGAACAATGGTGGAAATGTTGCAGCCTCTCTCATGGCTCATCTTGCTCCCAAAGCTAA ATGGATACACTTTGCAGTCTCTATGCATTCAACCATGAGAATAAGCCCATTTATTTGACGACATTTTTGTCATTCATCTATGCTTTAGGGCATTTCTTAACTGAATACTTGATATATCATACCATGTCCCATTGCAAATATGATGAAGGAGAACAATGGTGGAAATGTTGCAGCCTCTCTCATGGCTCATCTTGCTCCCAAAGCTAA MDTLCSLYAFNHENKPIYLTTFLSFIYALGHFLTEYLIYHTMSHCKYDEGEQWWKCCSLSHGSSCSQS
BLAST of CsGy2G009750.1 vs. NCBI nr
Match: XP_004136234.1 (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis sativus] >KGN60304.1 hypothetical protein Csa_3G894520 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11 Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. NCBI nr
Match: XP_008466094.1 (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo]) HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11 Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. NCBI nr
Match: XP_022981077.1 (ergosterol biosynthetic protein 28 [Cucurbita maxima] >XP_022981078.1 ergosterol biosynthetic protein 28 [Cucurbita maxima] >XP_023525018.1 ergosterol biosynthetic protein 28 [Cucurbita pepo subsp. pepo] >XP_023525019.1 ergosterol biosynthetic protein 28 [Cucurbita pepo subsp. pepo] >XP_023525020.1 ergosterol biosynthetic protein 28 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10 Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. NCBI nr
Match: XP_007201912.1 (ergosterol biosynthetic protein 28 [Prunus persica] >ONH92068.1 hypothetical protein PRUPE_8G152200 [Prunus persica] >PQM33144.1 ergosterol biosynthetic protein 28 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 73.6 bits (179), Expect = 3.0e-10 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. NCBI nr
Match: PON55159.1 (Erg [Parasponia andersonii]) HSP 1 Score: 73.6 bits (179), Expect = 3.0e-10 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. TAIR10
Match: AT1G10030.1 (homolog of yeast ergosterol28) HSP 1 Score: 69.3 bits (168), Expect = 1.0e-12 Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. Swiss-Prot
Match: sp|O80594|ERG28_ARATH (Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 PE=2 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-11 Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. TrEMBL
Match: tr|A0A1S3CQG2|A0A1S3CQG2_CUCME (ergosterol biosynthetic protein 28 OS=Cucumis melo OX=3656 GN=LOC103503620 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.0e-11 Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. TrEMBL
Match: tr|A0A0A0LGZ9|A0A0A0LGZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G894520 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.0e-11 Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. TrEMBL
Match: tr|A0A0D3HX27|A0A0D3HX27_9ORYZ (Uncharacterized protein OS=Oryza barthii OX=65489 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. TrEMBL
Match: tr|M5VQ76|M5VQ76_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G152200 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of CsGy2G009750.1 vs. TrEMBL
Match: tr|A0A2P5EML9|A0A2P5EML9_9ROSA (Erg OS=Trema orientalis OX=63057 GN=TorRG33x02_173430 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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