CsGy1G030250.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAGAAATGACTGTTTGTATCTTTAATGCGAATATTGTCCAAGAATATAACCCACAATGAAAAAATACAAAAAATGTGATTAATTTTATTATGACTAGAATGACGAGGGTTGTGTTAAAACTACGATAGACATAGTTATGTTTAAAGTGAGGCATACTTTATAGAATGGGTTAGCATATAAATTATAGTGAGCCCTCCGAACAAAGAGACACTTTAGAAGGCATGATCATCAAAGATTGACTATAAGAAATGCAAGAATGGAGTCGGTGGTCATATTTCGTTAGGTTATGGGATTTTGATTCACCGGCGCAATGGCGATGGTTGAGAAAGATTGTGAGAGAGTGGAGTTGGGACCGAGTGGGGGCCTCCAATTCCCTCAGTGGAACCAATTATCGCCGGAAGTGGAAGCTGCAATGTCAAGCAAAAGTAAACCCCAAAACCCTCAAAAGCCAAACCCAAACCCAAAAGTCCCTTCAAAAATCCCTATCGCTCACCCACCCTCTTCCTTCTTCCTTTCACTAAAATTCTTCATAACTTGTTCCCACCAACAACCCCCCCAATCATCATCATCATCATCTTTCCTTTTCATTTTTCTCTCTATTTTCTCCCCTTTCATTCCACTCAAACCACCTCCTCCTCATGTAAGTCCCTCTTTATCTCTGTTTTTGTGAATCTTCTCGAGTTTTGGAGAATTTTTTGTGTGATTTCCAATGGGTTCTGTTTGTTTTCTTCAGGATGTTGAGTTTTTATTGGTTTTTCTTGTGATGAGTCCGTTTGTGATTGATCTATGGTTTTGTTGATTAGAAGGGAGGAGATTAAGGGGTGTTGTTCTTGGTGGCGAATTTGATTTTCTGATGGATTCCTTTGATGGGATTTCTGTGTTTGGGTATGATGTGAATTCCAGCAACATGGATGATTCTGATTCTTCTGGGCTTCTTGAAATTTATGTACATCATGCTAGAAACATTCACAATATATGCATATATGAAAATCAGGATGTTTATGCAAAATTTTCACTCACCTATAATCCAGACCAGACCTTGTCCACTAGAGTCATTAATGGAGGTGGGAAGAATCCTGATTTCAATGAAAATTTGAGGATGAAAGTTACACAGCCTGATTCTGTGCTCAAATGTGAGATTTGGATGCTTAGTAGGGCTAGAAACTATTTGGAAGATCAGCTTTTGGGATTTGCTTTGGTTCCACTATCACAAGTTGTTGGTAAGGGGAAAGTGACAGAGAATTATAGCCTCTCTTCTACAGATCTCTTCCATTCCCCGGCCGGAACGGTCCAGTTGAGTCTGTCTTTAGATAAATCATTGCCTGTTGATGAATTGAATTCGATATCAGATCTGCCGGTTAGTTCATCTATATCTTCGGAAGTTGTGTTGTTGGACAGGAAAATATCAGAAGTGATGTTGGATTCAGCTGAGTATTCTAGGATTGAGTTCCCTGATGTTAATGTGGTGATGGAGAATCAACAAATGGTGTCCGAGTACTTTTCTTTGGCCGGAAATGATTCTTGTACAAGGCCTAGAATTGCCACATTTCTCCGTCTTGGTGCGTCGCCTCCCCAACCACCCTATGACTTTGAAATGACTGCTAATTCAACTGAAGAACACCAACCGGGATCAATTTCCCCAAATGAGAGTAGCATTCAAAACTCCAGCTTTTTAAGCTCCACAACAACGAGTTTGAGTGATGATCGAAACTCGGTTGATTCTGCTGAAAAGAAGATCCGTTTCTCAGGTGAGTCATCAAATTATGTGAATGCTTCAGTCACTACTATTGAAGCCAGAAATCAAGTCTCTGGTCCTTGTCCAGATACTCCAACTTCACGGAAGAGTGGCCGGGCTGCAGAGGATAAGGAATCAAAATTTTCAAACAATAAAGATAAGATTAGCATAAAAAAGGAAGGAAGTATCCCGTCTGTTAAATTTGGTCAACTGTTTTCAGCTCCTTTAGGAAACATTAATGTTGATGCTGAGCAGTCTGCAATGCAGCAGCAAATTGTTGACATGTATATGAAGAGTATGCATCAGTTTACAGAGTCTTTGGCAAAGATGAAACTTCCGATGGATCTTGATAAGCCCGAGCATGAACACCGAGGTGTTGTGCTTCAAACCCATGATCCCAAACCAGAAATCAACCAAAAGAAAAAGGACGGTTCTCGGGTTTTTTATGGTAGCAGGGCATTTTTCTGATAATCATATAGGTGATGGAAATTCGACACTTATAGCAGGGTATGGAACTCATAACTTATCAGAACCTTTACAAACTTCCCTGGCCTCATAATCAAATGGTATTTATAACTAATCTTTAATACTATTTTTTGTTTTCTCTAGCTTGCAACTCTTCATAAAGAGTAGTTCCTAATATATCTATACTAAATCATCTGTCACAGTCATGGCAACATGACATTCTTTGTCTTGTGATTAGAGTTTCGTTTTTTTTTTTTT GTAAGAAATGACTGTTTGTATCTTTAATGCGAATATTGTCCAAGAATATAACCCACAATGAAAAAATACAAAAAATGTGATTAATTTTATTATGACTAGAATGACGAGGGTTGTGTTAAAACTACGATAGACATAGTTATGTTTAAAGTGAGGCATACTTTATAGAATGGGTTAGCATATAAATTATAGTGAGCCCTCCGAACAAAGAGACACTTTAGAAGGCATGATCATCAAAGATTGACTATAAGAAATGCAAGAATGGAGTCGGTGGTCATATTTCGTTAGGTTATGGGATTTTGATTCACCGGCGCAATGGCGATGGTTGAGAAAGATTGTGAGAGAGTGGAGTTGGGACCGAGTGGGGGCCTCCAATTCCCTCAGTGGAACCAATTATCGCCGGAAGTGGAAGCTGCAATGTCAAGCAAAAGTAAACCCCAAAACCCTCAAAAGCCAAACCCAAACCCAAAAGTCCCTTCAAAAATCCCTATCGCTCACCCACCCTCTTCCTTCTTCCTTTCACTAAAATTCTTCATAACTTGTTCCCACCAACAACCCCCCCAATCATCATCATCATCATCTTTCCTTTTCATTTTTCTCTCTATTTTCTCCCCTTTCATTCCACTCAAACCACCTCCTCCTCATGATGTTGAGTTTTTATTGGTTTTTCTTGTGATGAGTCCGTTTGTGATTGATCTATGGTTTTGTTGATTAGAAGGGAGGAGATTAAGGGGTGTTGTTCTTGGTGGCGAATTTGATTTTCTGATGGATTCCTTTGATGGGATTTCTGTGTTTGGGTATGATGTGAATTCCAGCAACATGGATGATTCTGATTCTTCTGGGCTTCTTGAAATTTATGTACATCATGCTAGAAACATTCACAATATATGCATATATGAAAATCAGGATGTTTATGCAAAATTTTCACTCACCTATAATCCAGACCAGACCTTGTCCACTAGAGTCATTAATGGAGGTGGGAAGAATCCTGATTTCAATGAAAATTTGAGGATGAAAGTTACACAGCCTGATTCTGTGCTCAAATGTGAGATTTGGATGCTTAGTAGGGCTAGAAACTATTTGGAAGATCAGCTTTTGGGATTTGCTTTGGTTCCACTATCACAAGTTGTTGGTAAGGGGAAAGTGACAGAGAATTATAGCCTCTCTTCTACAGATCTCTTCCATTCCCCGGCCGGAACGGTCCAGTTGAGTCTGTCTTTAGATAAATCATTGCCTGTTGATGAATTGAATTCGATATCAGATCTGCCGGTTAGTTCATCTATATCTTCGGAAGTTGTGTTGTTGGACAGGAAAATATCAGAAGTGATGTTGGATTCAGCTGAGTATTCTAGGATTGAGTTCCCTGATGTTAATGTGGTGATGGAGAATCAACAAATGGTGTCCGAGTACTTTTCTTTGGCCGGAAATGATTCTTGTACAAGGCCTAGAATTGCCACATTTCTCCGTCTTGGTGCGTCGCCTCCCCAACCACCCTATGACTTTGAAATGACTGCTAATTCAACTGAAGAACACCAACCGGGATCAATTTCCCCAAATGAGAGTAGCATTCAAAACTCCAGCTTTTTAAGCTCCACAACAACGAGTTTGAGTGATGATCGAAACTCGGTTGATTCTGCTGAAAAGAAGATCCGTTTCTCAGGTGAGTCATCAAATTATGTGAATGCTTCAGTCACTACTATTGAAGCCAGAAATCAAGTCTCTGGTCCTTGTCCAGATACTCCAACTTCACGGAAGAGTGGCCGGGCTGCAGAGGATAAGGAATCAAAATTTTCAAACAATAAAGATAAGATTAGCATAAAAAAGGAAGGAAGTATCCCGTCTGTTAAATTTGGTCAACTGTTTTCAGCTCCTTTAGGAAACATTAATGTTGATGCTGAGCAGTCTGCAATGCAGCAGCAAATTGTTGACATGTATATGAAGAGTATGCATCAGTTTACAGAGTCTTTGGCAAAGATGAAACTTCCGATGGATCTTGATAAGCCCGAGCATGAACACCGAGGTGTTGTGCTTCAAACCCATGATCCCAAACCAGAAATCAACCAAAAGAAAAAGGACGGTTCTCGGGTTTTTTATGGTAGCAGGGCATTTTTCTGATAATCATATAGGTGATGGAAATTCGACACTTATAGCAGGGTATGGAACTCATAACTTATCAGAACCTTTACAAACTTCCCTGGCCTCATAATCAAATGGTATTTATAACTAATCTTTAATACTATTTTTTGTTTTCTCTAGCTTGCAACTCTTCATAAAGAGTAGTTCCTAATATATCTATACTAAATCATCTGTCACAGTCATGGCAACATGACATTCTTTGTCTTGTGATTAGAGTTTCGTTTTTTTTTTTTT ATGGCGATGGTTGAGAAAGATTGTGAGAGAGTGGAGTTGGGACCGAGTGGGGGCCTCCAATTCCCTCAGTGGAACCAATTATCGCCGGAAGTGGAAGCTGCAATGTCAAGCAAAAGTAAACCCCAAAACCCTCAAAAGCCAAACCCAAACCCAAAAGTCCCTTCAAAAATCCCTATCGCTCACCCACCCTCTTCCTTCTTCCTTTCACTAAAATTCTTCATAACTTGTTCCCACCAACAACCCCCCCAATCATCATCATCATCATCTTTCCTTTTCATTTTTCTCTCTATTTTCTCCCCTTTCATTCCACTCAAACCACCTCCTCCTCATGATGTTGAGTTTTTATTGGTTTTTCTTGTGATGAGTCCGTTTGTGATTGATCTATGGTTTTGTTGA MAMVEKDCERVELGPSGGLQFPQWNQLSPEVEAAMSSKSKPQNPQKPNPNPKVPSKIPIAHPPSSFFLSLKFFITCSHQQPPQSSSSSSFLFIFLSIFSPFIPLKPPPPHDVEFLLVFLVMSPFVIDLWFC
BLAST of CsGy1G030250.1 vs. NCBI nr
Match: KGN66543.1 (hypothetical protein Csa_1G629000 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 7.5e-42 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of CsGy1G030250.1 vs. NCBI nr
Match: XP_022988095.1 (uncharacterized protein LOC111485445 isoform X1 [Cucurbita maxima]) HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05 Identity = 35/50 (70.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of CsGy1G030250.1 vs. TrEMBL
Match: tr|A0A0A0LXS2|A0A0A0LXS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629000 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.9e-42 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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