CsGy1G030200.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATATGGACAGACTTGGTTGGAAACAACACAGGCTTGGGTTGGGATTCATCAAGACAAACTATTGATGCACCAACCCAGTGGTGGGAAGAGAATTTAAAGGTATATCATTTATTTATTAGAAATGAAAATTATAATTAAATACTTCTTAAATCAATATCTTCTAGGTTAAGGCCGAGACAGCAAAATTTCGAGCAAAGGGGTTGCAAAATGCAGACCAATTAGATATTCTTTTTAAAGATATTGTCGTTACAGGTGATGGAGCATGGACACCATCTTAAAGATTTGTACCTCAAAGTAGTGAAGACAATTCATTTAGACATGTAG ATATGGACAGACTTGGTTGGAAACAACACAGGCTTGGGTTGGGATTCATCAAGACAAACTATTGATGCACCAACCCAGTGGTGGGAAGAGAATTTAAAGGTTAAGGCCGAGACAGCAAAATTTCGAGCAAAGGGGTTGCAAAATGCAGACCAATTAGATATTCTTTTTAAAGATATTGTCGTGATGGAGCATGGACACCATCTTAAAGATTTGTACCTCAAAGTAGTGAAGACAATTCATTTAGACATGTAG ATATGGACAGACTTGGTTGGAAACAACACAGGCTTGGGTTGGGATTCATCAAGACAAACTATTGATGCACCAACCCAGTGGTGGGAAGAGAATTTAAAGGTTAAGGCCGAGACAGCAAAATTTCGAGCAAAGGGGTTGCAAAATGCAGACCAATTAGATATTCTTTTTAAAGATATTGTCGTGATGGAGCATGGACACCATCTTAAAGATTTGTACCTCAAAGTAGTGAAGACAATTCATTTAGACATGTAG IWTDLVGNNTGLGWDSSRQTIDAPTQWWEENLKVKAETAKFRAKGLQNADQLDILFKDIVVMEHGHHLKDLYLKVVKTIHLDM
BLAST of CsGy1G030200.1 vs. NCBI nr
Match: XP_016900494.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 4.0e-25 Identity = 57/65 (87.69%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. NCBI nr
Match: XP_008441646.2 (PREDICTED: LOW QUALITY PROTEIN: L10-interacting MYB domain-containing protein-like, partial [Cucumis melo]) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. NCBI nr
Match: XP_022159819.1 (L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022159820.1 L10-interacting MYB domain-containing protein-like [Momordica charantia]) HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. NCBI nr
Match: XP_023549677.1 (L10-interacting MYB domain-containing protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. NCBI nr
Match: XP_019074421.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Vitis vinifera]) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-13 Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. TrEMBL
Match: tr|A0A1S4DWY7|A0A1S4DWY7_CUCME (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103491789 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.7e-25 Identity = 57/65 (87.69%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. TrEMBL
Match: tr|A0A1S3B4J4|A0A1S3B4J4_CUCME (LOW QUALITY PROTEIN: L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103485728 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. TrEMBL
Match: tr|A0A0A0KKV6|A0A0A0KKV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.0e-13 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. TrEMBL
Match: tr|A0A1S3AT15|A0A1S3AT15_CUCME (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103482538 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.2e-13 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0
BLAST of CsGy1G030200.1 vs. TrEMBL
Match: tr|A5AXN9|A5AXN9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023669 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-12 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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