CsGy1G022060.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G022060.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	zinc finger protein ZAT12-like
Location	Chr1 : 20837255 .. 20837722 (-)
Sequence length	468

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGAAGGAGAGTTTCAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAATAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTCTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCATGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGGCGCCACCGCACCTCCACCACAACCGTGGTGGTGGAGAAATCTGACGCCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACCACTCCTTTTGTAAATTGTTTTTATTAA

mRNA sequence

ATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGAAGGAGAGTTTCAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAATAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTCTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCATGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGGCGCCACCGCACCTCCACCACAACCGTGGTGGTGGAGAAATCTGACGCCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACCACTCCTTTTGTAAATTGTTTTTATTAA

Coding sequence (CDS)

ATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGAAGGAGAGTTTCAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAATAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTCTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCATGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGGCGCCACCGCACCTCCACCACAACCGTGGTGGTGGAGAAATCTGACGCCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACCACTCCTTTTGTAAATTGTTTTTATTAA

Protein sequence

MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGHRASHKKPNSKDPPTKPKAHECPICGLHFPIGQALGGHMRRHRTSTTTVVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY

Homology

[Close]

BLAST of CsGy1G022060.1 vs. NCBI nr
Match: KGN65670.1 (hypothetical protein Csa_1G481720 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 5.3e-63
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS
Sbjct: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120
           SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK
Sbjct: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120

Query: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
           SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY
Sbjct: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 155

[Close]

BLAST of CsGy1G022060.1 vs. NCBI nr
Match: XP_008457541.1 (PREDICTED: zinc finger protein ZAT12-like [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50
Identity = 137/160 (85.62%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MF LE LDP FMKREREGEF+ LDMVDC+SKVEEPWR N+APA DSGKVFVCKTCNREFS
Sbjct: 1   MFPLE-LDPNFMKREREGEFEALDMVDCLSKVEEPWRKNTAPAADSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKD---PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT-- 120
           SFQALGGHRASHKKPN KD   PP  XXXXXXXXXXXXXXXXXXXXXXXXXXXX TTT  
Sbjct: 61  SFQALGGHRASHKKPNFKDANGPPTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTAA 120

Query: 121 VVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
            V+EKSD G KRGFGLDLNLTPIENNLKLQL+TPFVNCFY
Sbjct: 121 AVLEKSDGGEKRGFGLDLNLTPIENNLKLQLSTPFVNCFY 159

[Close]

BLAST of CsGy1G022060.1 vs. NCBI nr
Match: XP_022949001.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 104/144 (72.22%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 12  MKRERE-GEFQVLDMVDC---MSKVEEPWRNNS---APAGDSGKVFVCKTCNREFSSFQA 71
           MKRERE GEF+VLDMVDC   +SK+EEP R N     PA DS K+FVCKTCNREFSSFQA
Sbjct: 1   MKREREGGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQA 60

Query: 72  LGGHRASHKKP--NSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEKSD 131
           LGGHR SH KP  N+  PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      V++KSD
Sbjct: 61  LGGHRTSHTKPNFNANGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAAAAVLKKSD 120

Query: 132 AGGKRGFGLDLNLTPIENNLKLQL 147
             GKR F LDLNL P+ENNL L+L
Sbjct: 121 GCGKRVFELDLNLPPLENNLNLKL 144

[Close]

BLAST of CsGy1G022060.1 vs. NCBI nr
Match: XP_022997819.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 8.9e-26
Identity = 104/144 (72.22%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 12  MKRER-EGEFQVLDMVDC---MSKVEEPWRNNS---APAGDSGKVFVCKTCNREFSSFQA 71
           MKRER EGEF+VLDMVDC   +SK+EEP R N     PA DS KVFVCKTCNREFSSFQA
Sbjct: 1   MKREREEGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKVFVCKTCNREFSSFQA 60

Query: 72  LGGHRASHKKP--NSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEKSD 131
           LGGHR SH KP  N+  P XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      V++KSD
Sbjct: 61  LGGHRTSHTKPNFNANGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAAAAVLKKSD 120

Query: 132 AGGKRGFGLDLNLTPIENNLKLQL 147
             GKR F LDLNL P+ENNL L+L
Sbjct: 121 GCGKRVFELDLNLPPLENNLNLKL 144

[Close]

BLAST of CsGy1G022060.1 vs. NCBI nr
Match: XP_022158363.1 (zinc finger protein ZAT12-like [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 82/174 (47.13%), Postives = 94/174 (54.02%), Query Frame = 0


Query: 12  MKRER-EGEFQVLDMVDCM-------------SKVEEPWRNNSAPA---GDSGKVFVCKT 71
           MKRER EGE +V DMVD +              + EEP R NS+PA     +GKV +CKT
Sbjct: 1   MKREREEGELEVFDMVDSLMLLSRVGEYNNDQQRPEEPQRKNSSPAAADSGNGKVLICKT 60

Query: 72  CNREFSSFQALGGHRASHKKPNSKD-----------PPXXXXXXXXXXXXXXXXXXXXXX 131
           C REF SFQALGGHRASH K    D           PP                    XX
Sbjct: 61  CKREFKSFQALGGHRASHGKAKFMDVNSAEVFNPLRPPPAKSGTHQCPVCGLQFPIGQXX 120

Query: 132 XXXXXXXXXT--TTVVVEKSDAGGKRGFGLDLNLTPIE-NNLKLQLTTPFVNCF 155
           XXXXXXX  T     V++KSD    R FG+DLNL P++ NNLKLQL TPFV+CF
Sbjct: 121 XXXXXXXRSTAAAAAVLKKSDGREVRVFGVDLNLAPVDNNNLKLQLMTPFVDCF 174

[Close]

BLAST of CsGy1G022060.1 vs. TAIR10
Match: AT2G28710.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 81/156 (51.92%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 12  MKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGHRAS 71
           M+R R     + +M +C+  + +  +N++       +VF CKTCN+EF SFQALGGHRAS
Sbjct: 1   MERGRSDMEMINNMANCLILLSKAHQNDT-----KSRVFACKTCNKEFPSFQALGGHRAS 60

Query: 72  HKKPNSKD---PP----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           H++  + +   PP                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HRRSAALEGHAPPSPKRVKPVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 132 TTTVVVEKSDAG-GKRGFGLDLNLTPIEN-NLKLQL 147
           T  V ++KS  G GKR   LDLNLTP+EN +LKL+L
Sbjct: 121 TAPVTMKKSGGGNGKRVLCLDLNLTPLENEDLKLEL 151

[Close]

BLAST of CsGy1G022060.1 vs. TAIR10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 79/170 (46.47%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 12  MKRER---EGEFQVLDMVDCM------SKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSF 71
           MKRER   E   + +D+  C+      S V++   N    +  S + F CKTCN+ FSSF
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSF 60

Query: 72  QALGGHRASHKKPN-----------SKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           QALGGHRASHKKP            S D      XXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 61  QALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFXXXXXXXXXXXXXXXXXXXXXXXXXS 120

Query: 132 XTT----------TVVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFV 152
            T           ++ V K     KR   LDLNLTP+EN+L+      FV
Sbjct: 121 MTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFV 169

[Close]

BLAST of CsGy1G022060.1 vs. TAIR10
Match: AT5G59820.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKKPNS 78
          GD  +VF CKTC ++F SFQALGGHRASHKKPN+
Sbjct: 33 GDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNN 66

[Close]

BLAST of CsGy1G022060.1 vs. TAIR10
Match: AT3G46080.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKK-PNSKDP 81
          G   +VF CKTC +EFSSFQALGGHRASHKK  NS DP
Sbjct: 31 GGEKRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDP 68

[Close]

BLAST of CsGy1G022060.1 vs. TAIR10
Match: AT2G28200.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0


Query: 49  VFVCKTCNREFSSFQALGGHRASHKKPNS 78
           V+ CKTCNR FSSFQALGGHRASHKKP +
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRT 142

[Close]

BLAST of CsGy1G022060.1 vs. Swiss-Prot
Match: sp|Q9SLD4|ZAT11_ARATH (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-09
Identity = 79/170 (46.47%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 12  MKRER---EGEFQVLDMVDCM------SKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSF 71
           MKRER   E   + +D+  C+      S V++   N    +  S + F CKTCN+ FSSF
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSF 60

Query: 72  QALGGHRASHKKPN-----------SKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           QALGGHRASHKKP            S D      XXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 61  QALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFXXXXXXXXXXXXXXXXXXXXXXXXXS 120

Query: 132 XTT----------TVVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFV 152
            T           ++ V K     KR   LDLNLTP+EN+L+      FV
Sbjct: 121 MTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFV 169

[Close]

BLAST of CsGy1G022060.1 vs. Swiss-Prot
Match: sp|Q42410|ZAT12_ARATH (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKKPNS 78
          GD  +VF CKTC ++F SFQALGGHRASHKKPN+
Sbjct: 33 GDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNN 66

[Close]

BLAST of CsGy1G022060.1 vs. Swiss-Prot
Match: sp|Q9LX85|ZAT8_ARATH (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKK-PNSKDP 81
          G   +VF CKTC +EFSSFQALGGHRASHKK  NS DP
Sbjct: 31 GGEKRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDP 68

[Close]

BLAST of CsGy1G022060.1 vs. Swiss-Prot
Match: sp|Q681X4|ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.8e-07
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0


Query: 49  VFVCKTCNREFSSFQALGGHRASHKKPNS 78
           V+ CKTCNR FSSFQALGGHRASHKKP +
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRT 142

[Close]

BLAST of CsGy1G022060.1 vs. Swiss-Prot
Match: sp|Q42453|ZAT7_ARATH (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-07
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0


Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKKPNSKDPP 82
          G   +VF CKTC +EFSSFQALGGHRASHKK  + D P
Sbjct: 34 GGDERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNP 71

[Close]

BLAST of CsGy1G022060.1 vs. TrEMBL
Match: tr|A0A0A0LUQ6|A0A0A0LUQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G481720 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.5e-63
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS
Sbjct: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120
           SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK
Sbjct: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120

Query: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
           SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY
Sbjct: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 155

[Close]

BLAST of CsGy1G022060.1 vs. TrEMBL
Match: tr|A0A1S3C722|A0A1S3C722_CUCME (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 137/160 (85.62%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MF LE LDP FMKREREGEF+ LDMVDC+SKVEEPWR N+APA DSGKVFVCKTCNREFS
Sbjct: 1   MFPLE-LDPNFMKREREGEFEALDMVDCLSKVEEPWRKNTAPAADSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKD---PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT-- 120
           SFQALGGHRASHKKPN KD   PP  XXXXXXXXXXXXXXXXXXXXXXXXXXXX TTT  
Sbjct: 61  SFQALGGHRASHKKPNFKDANGPPTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTAA 120

Query: 121 VVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
            V+EKSD G KRGFGLDLNLTPIENNLKLQL+TPFVNCFY
Sbjct: 121 AVLEKSDGGEKRGFGLDLNLTPIENNLKLQLSTPFVNCFY 159

[Close]

BLAST of CsGy1G022060.1 vs. TrEMBL
Match: tr|A0A2P6QIB4|A0A2P6QIB4_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0063021 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 12 MKREREGEFQVLDMVDCMSKVEEPWRNNSA---PAGDSGKVFVCKTCNREFSSFQALGGH 71
          MKR RE E Q  D+V+C+  + +  RN+S+       SG+VF CKTCNREFSSFQALGGH
Sbjct: 1  MKRAREDEHQTQDLVNCLMLLSKVDRNHSSSIREQNSSGRVFACKTCNREFSSFQALGGH 60

Query: 72 RASHKKP 76
          RASHKKP
Sbjct: 61 RASHKKP 67

[Close]

BLAST of CsGy1G022060.1 vs. TrEMBL
Match: tr|A0A2P6QIA9|A0A2P6QIA9_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0063011 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.4e-13
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 12 MKREREGEFQVLDMVDC---MSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGH 71
          MKR RE + Q LD+V+C   +SKV++   ++      S +VFVCKTCNREFSSFQALGGH
Sbjct: 1  MKRGREDDQQTLDLVNCLMLLSKVDQNDSSSIKKQKISDRVFVCKTCNREFSSFQALGGH 60

Query: 72 RASHKKPNSKD 80
          RASHKKP+  D
Sbjct: 61 RASHKKPSGAD 71

[Close]

BLAST of CsGy1G022060.1 vs. TrEMBL
Match: tr|A0A1S4C4V0|A0A1S4C4V0_TOBAC (zinc finger protein ZAT11-like OS=Nicotiana tabacum OX=4097 GN=LOC107815184 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-12
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 12  MKREREGEFQ-VLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGHRA 71
           +KREREGEF  +  M + +  +     N         +VF CKTCNR+FSSFQALGGHRA
Sbjct: 8   IKREREGEFDTITTMANYLMLLSRQANNFDNINNSPNRVFECKTCNRQFSSFQALGGHRA 67

Query: 72  SHKKPN----------SKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------T 131
           SHKKP           S  PP  XXXXXXXXXXXXXXXXXXXXXXXXXX           
Sbjct: 68  SHKKPRLMGELNFHQLSTSPPKPXXXXXXXXXXXXXXXXXXXXXXXXXXAILNENNNIQV 127

Query: 132 TVVVEKSDAGGKRGFGLDLNLTPIENNLKLQL--TTPFVNCF 155
             VV+KS++  +R   LDLNLTP+EN+L+ +L  ++P V+CF
Sbjct: 128 PHVVKKSNS--RRVLCLDLNLTPLENDLEFKLGKSSPVVDCF 167

The following BLAST results are available for this feature:

BLAST of CsGy1G022060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65670.1	5.3e-63	100.00	hypothetical protein Csa_1G481720 [Cucumis sativus]	[more]
XP_008457541.1	2.3e-50	85.63	PREDICTED: zinc finger protein ZAT12-like [Cucumis melo]	[more]
XP_022949001.1	1.4e-26	72.22	zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata]	[more]
XP_022997819.1	8.9e-26	72.22	zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima]	[more]
XP_022158363.1	1.9e-20	47.13	zinc finger protein ZAT12-like [Momordica charantia]	[more]

BLAST of CsGy1G022060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28710.1	1.2e-11	51.92	C2H2-type zinc finger family protein	[more]
AT2G37430.1	4.9e-10	46.47	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G59820.1	1.4e-09	73.53	C2H2-type zinc finger family protein	[more]
AT3G46080.1	1.2e-08	73.68	C2H2-type zinc finger family protein	[more]
AT2G28200.1	1.6e-08	82.76	C2H2-type zinc finger family protein	[more]

BLAST of CsGy1G022060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SLD4\|ZAT11_ARATH	8.8e-09	46.47	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
sp\|Q42410\|ZAT12_ARATH	2.6e-08	73.53	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
sp\|Q9LX85\|ZAT8_ARATH	2.2e-07	73.68	Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1	[more]
sp\|Q681X4\|ZAT5_ARATH	2.8e-07	82.76	Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1	[more]
sp\|Q42453\|ZAT7_ARATH	3.7e-07	68.42	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]

BLAST of CsGy1G022060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUQ6\|A0A0A0LUQ6_CUCSA	3.5e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G481720 PE=4 SV=1	[more]
tr\|A0A1S3C722\|A0A1S3C722_CUCME	1.5e-50	85.63	zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1	[more]
tr\|A0A2P6QIB4\|A0A2P6QIB4_ROSCH	3.3e-13	61.19	Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]
tr\|A0A2P6QIA9\|A0A2P6QIA9_ROSCH	7.4e-13	59.15	Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]
tr\|A0A1S4C4V0\|A0A1S4C4V0_TOBAC	1.7e-12	51.85	zinc finger protein ZAT11-like OS=Nicotiana tabacum OX=4097 GN=LOC107815184 PE=4...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G022060	CsGy1G022060	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G022060.1.CDS.1	CsGy1G022060.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G022060.1.exon.1	CsGy1G022060.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G022060.1	CsGy1G022060.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 50..72 e-value: 0.24 score: 20.5 coord: 87..109 e-value: 0.11 score: 21.6
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 89..109
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 52..72
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 50..77 score: 9.702
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 87..114 score: 8.663
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 29..113 e-value: 4.4E-10 score: 41.5
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 49..74 e-value: 3.7E-12 score: 45.8 coord: 86..110 e-value: 1.2E-9 score: 37.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..84
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 12..115
None	No IPR available	PANTHER	PTHR26374:SF198	ZINC FINGER PROTEIN ZAT11	coord: 12..115
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 48..109