CsGy1G022060 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G022060
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionzinc finger protein ZAT12-like
LocationChr1 : 20837255 .. 20837722 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGAAGGAGAGTTTCAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAATAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTCTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCATGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGGCGCCACCGCACCTCCACCACAACCGTGGTGGTGGAGAAATCTGACGCCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACCACTCCTTTTGTAAATTGTTTTTATTAA

mRNA sequence

ATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGAAGGAGAGTTTCAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAATAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTCTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCATGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGGCGCCACCGCACCTCCACCACAACCGTGGTGGTGGAGAAATCTGACGCCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACCACTCCTTTTGTAAATTGTTTTTATTAA

Coding sequence (CDS)

ATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGAAGGAGAGTTTCAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAATAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTCTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCATGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGGCGCCACCGCACCTCCACCACAACCGTGGTGGTGGAGAAATCTGACGCCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACCACTCCTTTTGTAAATTGTTTTTATTAA

Protein sequence

MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGHRASHKKPNSKDPPTKPKAHECPICGLHFPIGQALGGHMRRHRTSTTTVVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY
Homology
[Close]
BLAST of CsGy1G022060 vs. NCBI nr
Match: KGN65670.1 (hypothetical protein Csa_1G481720 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 5.3e-63
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS
Sbjct: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120
           SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK
Sbjct: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120

Query: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
           SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY
Sbjct: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 155

[Close]
BLAST of CsGy1G022060 vs. NCBI nr
Match: XP_008457541.1 (PREDICTED: zinc finger protein ZAT12-like [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50
Identity = 137/160 (85.62%), Postives = 142/160 (88.75%), Query Frame = 0 

Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MF LE LDP FMKREREGEF+ LDMVDC+SKVEEPWR N+APA DSGKVFVCKTCNREFS
Sbjct: 1   MFPLE-LDPNFMKREREGEFEALDMVDCLSKVEEPWRKNTAPAADSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKD---PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT-- 120
           SFQALGGHRASHKKPN KD   PP  XXXXXXXXXXXXXXXXXXXXXXXXXXXX TTT  
Sbjct: 61  SFQALGGHRASHKKPNFKDANGPPTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTAA 120

Query: 121 VVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
            V+EKSD G KRGFGLDLNLTPIENNLKLQL+TPFVNCFY
Sbjct: 121 AVLEKSDGGEKRGFGLDLNLTPIENNLKLQLSTPFVNCFY 159

[Close]
BLAST of CsGy1G022060 vs. NCBI nr
Match: XP_022949001.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 104/144 (72.22%), Postives = 113/144 (78.47%), Query Frame = 0 

Query: 12  MKRERE-GEFQVLDMVDC---MSKVEEPWRNNS---APAGDSGKVFVCKTCNREFSSFQA 71
           MKRERE GEF+VLDMVDC   +SK+EEP R N     PA DS K+FVCKTCNREFSSFQA
Sbjct: 1   MKREREGGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQA 60

Query: 72  LGGHRASHKKP--NSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEKSD 131
           LGGHR SH KP  N+  PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      V++KSD
Sbjct: 61  LGGHRTSHTKPNFNANGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAAAAVLKKSD 120

Query: 132 AGGKRGFGLDLNLTPIENNLKLQL 147
             GKR F LDLNL P+ENNL L+L
Sbjct: 121 GCGKRVFELDLNLPPLENNLNLKL 144

[Close]
BLAST of CsGy1G022060 vs. NCBI nr
Match: XP_022997819.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 8.9e-26
Identity = 104/144 (72.22%), Postives = 112/144 (77.78%), Query Frame = 0 

Query: 12  MKRER-EGEFQVLDMVDC---MSKVEEPWRNNS---APAGDSGKVFVCKTCNREFSSFQA 71
           MKRER EGEF+VLDMVDC   +SK+EEP R N     PA DS KVFVCKTCNREFSSFQA
Sbjct: 1   MKREREEGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKVFVCKTCNREFSSFQA 60

Query: 72  LGGHRASHKKP--NSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEKSD 131
           LGGHR SH KP  N+  P XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      V++KSD
Sbjct: 61  LGGHRTSHTKPNFNANGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAAAAVLKKSD 120

Query: 132 AGGKRGFGLDLNLTPIENNLKLQL 147
             GKR F LDLNL P+ENNL L+L
Sbjct: 121 GCGKRVFELDLNLPPLENNLNLKL 144

[Close]
BLAST of CsGy1G022060 vs. NCBI nr
Match: XP_022158363.1 (zinc finger protein ZAT12-like [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 82/174 (47.13%), Postives = 94/174 (54.02%), Query Frame = 0 

Query: 12  MKRER-EGEFQVLDMVDCM-------------SKVEEPWRNNSAPA---GDSGKVFVCKT 71
           MKRER EGE +V DMVD +              + EEP R NS+PA     +GKV +CKT
Sbjct: 1   MKREREEGELEVFDMVDSLMLLSRVGEYNNDQQRPEEPQRKNSSPAAADSGNGKVLICKT 60

Query: 72  CNREFSSFQALGGHRASHKKPNSKD-----------PPXXXXXXXXXXXXXXXXXXXXXX 131
           C REF SFQALGGHRASH K    D           PP                    XX
Sbjct: 61  CKREFKSFQALGGHRASHGKAKFMDVNSAEVFNPLRPPPAKSGTHQCPVCGLQFPIGQXX 120

Query: 132 XXXXXXXXXT--TTVVVEKSDAGGKRGFGLDLNLTPIE-NNLKLQLTTPFVNCF 155
           XXXXXXX  T     V++KSD    R FG+DLNL P++ NNLKLQL TPFV+CF
Sbjct: 121 XXXXXXXRSTAAAAAVLKKSDGREVRVFGVDLNLAPVDNNNLKLQLMTPFVDCF 174

[Close]
BLAST of CsGy1G022060 vs. TAIR10
Match: AT2G28710.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 81/156 (51.92%), Postives = 102/156 (65.38%), Query Frame = 0 

Query: 12  MKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGHRAS 71
           M+R R     + +M +C+  + +  +N++       +VF CKTCN+EF SFQALGGHRAS
Sbjct: 1   MERGRSDMEMINNMANCLILLSKAHQNDT-----KSRVFACKTCNKEFPSFQALGGHRAS 60

Query: 72  HKKPNSKD---PP----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           H++  + +   PP                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HRRSAALEGHAPPSPKRVKPVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 132 TTTVVVEKSDAG-GKRGFGLDLNLTPIEN-NLKLQL 147
           T  V ++KS  G GKR   LDLNLTP+EN +LKL+L
Sbjct: 121 TAPVTMKKSGGGNGKRVLCLDLNLTPLENEDLKLEL 151

[Close]
BLAST of CsGy1G022060 vs. TAIR10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 79/170 (46.47%), Postives = 93/170 (54.71%), Query Frame = 0 

Query: 12  MKRER---EGEFQVLDMVDCM------SKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSF 71
           MKRER   E   + +D+  C+      S V++   N    +  S + F CKTCN+ FSSF
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSF 60

Query: 72  QALGGHRASHKKPN-----------SKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           QALGGHRASHKKP            S D      XXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 61  QALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFXXXXXXXXXXXXXXXXXXXXXXXXXS 120

Query: 132 XTT----------TVVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFV 152
            T           ++ V K     KR   LDLNLTP+EN+L+      FV
Sbjct: 121 MTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFV 169

[Close]
BLAST of CsGy1G022060 vs. TAIR10
Match: AT5G59820.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKKPNS 78
          GD  +VF CKTC ++F SFQALGGHRASHKKPN+
Sbjct: 33 GDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNN 66

[Close]
BLAST of CsGy1G022060 vs. TAIR10
Match: AT3G46080.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKK-PNSKDP 81
          G   +VF CKTC +EFSSFQALGGHRASHKK  NS DP
Sbjct: 31 GGEKRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDP 68

[Close]
BLAST of CsGy1G022060 vs. TAIR10
Match: AT2G28200.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 49  VFVCKTCNREFSSFQALGGHRASHKKPNS 78
           V+ CKTCNR FSSFQALGGHRASHKKP +
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRT 142

[Close]
BLAST of CsGy1G022060 vs. Swiss-Prot
Match: sp|Q9SLD4|ZAT11_ARATH (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-09
Identity = 79/170 (46.47%), Postives = 93/170 (54.71%), Query Frame = 0 

Query: 12  MKRER---EGEFQVLDMVDCM------SKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSF 71
           MKRER   E   + +D+  C+      S V++   N    +  S + F CKTCN+ FSSF
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSF 60

Query: 72  QALGGHRASHKKPN-----------SKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           QALGGHRASHKKP            S D      XXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 61  QALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFXXXXXXXXXXXXXXXXXXXXXXXXXS 120

Query: 132 XTT----------TVVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFV 152
            T           ++ V K     KR   LDLNLTP+EN+L+      FV
Sbjct: 121 MTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFV 169

[Close]
BLAST of CsGy1G022060 vs. Swiss-Prot
Match: sp|Q42410|ZAT12_ARATH (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKKPNS 78
          GD  +VF CKTC ++F SFQALGGHRASHKKPN+
Sbjct: 33 GDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNN 66

[Close]
BLAST of CsGy1G022060 vs. Swiss-Prot
Match: sp|Q9LX85|ZAT8_ARATH (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKK-PNSKDP 81
          G   +VF CKTC +EFSSFQALGGHRASHKK  NS DP
Sbjct: 31 GGEKRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDP 68

[Close]
BLAST of CsGy1G022060 vs. Swiss-Prot
Match: sp|Q681X4|ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.8e-07
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 49  VFVCKTCNREFSSFQALGGHRASHKKPNS 78
           V+ CKTCNR FSSFQALGGHRASHKKP +
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRT 142

[Close]
BLAST of CsGy1G022060 vs. Swiss-Prot
Match: sp|Q42453|ZAT7_ARATH (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-07
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 44 GDSGKVFVCKTCNREFSSFQALGGHRASHKKPNSKDPP 82
          G   +VF CKTC +EFSSFQALGGHRASHKK  + D P
Sbjct: 34 GGDERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNP 71

[Close]
BLAST of CsGy1G022060 vs. TrEMBL
Match: tr|A0A0A0LUQ6|A0A0A0LUQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G481720 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.5e-63
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS
Sbjct: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120
           SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK
Sbjct: 61  SFQALGGHRASHKKPNSKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTVVVEK 120

Query: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
           SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY
Sbjct: 121 SDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 155

[Close]
BLAST of CsGy1G022060 vs. TrEMBL
Match: tr|A0A1S3C722|A0A1S3C722_CUCME (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 137/160 (85.62%), Postives = 142/160 (88.75%), Query Frame = 0 

Query: 1   MFRLELLDPKFMKREREGEFQVLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFS 60
           MF LE LDP FMKREREGEF+ LDMVDC+SKVEEPWR N+APA DSGKVFVCKTCNREFS
Sbjct: 1   MFPLE-LDPNFMKREREGEFEALDMVDCLSKVEEPWRKNTAPAADSGKVFVCKTCNREFS 60

Query: 61  SFQALGGHRASHKKPNSKD---PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT-- 120
           SFQALGGHRASHKKPN KD   PP  XXXXXXXXXXXXXXXXXXXXXXXXXXXX TTT  
Sbjct: 61  SFQALGGHRASHKKPNFKDANGPPTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTAA 120

Query: 121 VVVEKSDAGGKRGFGLDLNLTPIENNLKLQLTTPFVNCFY 156
            V+EKSD G KRGFGLDLNLTPIENNLKLQL+TPFVNCFY
Sbjct: 121 AVLEKSDGGEKRGFGLDLNLTPIENNLKLQLSTPFVNCFY 159

[Close]
BLAST of CsGy1G022060 vs. TrEMBL
Match: tr|A0A2P6QIB4|A0A2P6QIB4_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0063021 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 12 MKREREGEFQVLDMVDCMSKVEEPWRNNSA---PAGDSGKVFVCKTCNREFSSFQALGGH 71
          MKR RE E Q  D+V+C+  + +  RN+S+       SG+VF CKTCNREFSSFQALGGH
Sbjct: 1  MKRAREDEHQTQDLVNCLMLLSKVDRNHSSSIREQNSSGRVFACKTCNREFSSFQALGGH 60

Query: 72 RASHKKP 76
          RASHKKP
Sbjct: 61 RASHKKP 67

[Close]
BLAST of CsGy1G022060 vs. TrEMBL
Match: tr|A0A2P6QIA9|A0A2P6QIA9_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0063011 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.4e-13
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 12 MKREREGEFQVLDMVDC---MSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGH 71
          MKR RE + Q LD+V+C   +SKV++   ++      S +VFVCKTCNREFSSFQALGGH
Sbjct: 1  MKRGREDDQQTLDLVNCLMLLSKVDQNDSSSIKKQKISDRVFVCKTCNREFSSFQALGGH 60

Query: 72 RASHKKPNSKD 80
          RASHKKP+  D
Sbjct: 61 RASHKKPSGAD 71

[Close]
BLAST of CsGy1G022060 vs. TrEMBL
Match: tr|A0A1S4C4V0|A0A1S4C4V0_TOBAC (zinc finger protein ZAT11-like OS=Nicotiana tabacum OX=4097 GN=LOC107815184 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-12
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 0 

Query: 12  MKREREGEFQ-VLDMVDCMSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGHRA 71
           +KREREGEF  +  M + +  +     N         +VF CKTCNR+FSSFQALGGHRA
Sbjct: 8   IKREREGEFDTITTMANYLMLLSRQANNFDNINNSPNRVFECKTCNRQFSSFQALGGHRA 67

Query: 72  SHKKPN----------SKDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------T 131
           SHKKP           S  PP  XXXXXXXXXXXXXXXXXXXXXXXXXX           
Sbjct: 68  SHKKPRLMGELNFHQLSTSPPKPXXXXXXXXXXXXXXXXXXXXXXXXXXAILNENNNIQV 127

Query: 132 TVVVEKSDAGGKRGFGLDLNLTPIENNLKLQL--TTPFVNCF 155
             VV+KS++  +R   LDLNLTP+EN+L+ +L  ++P V+CF
Sbjct: 128 PHVVKKSNS--RRVLCLDLNLTPLENDLEFKLGKSSPVVDCF 167

The following BLAST results are available for this feature:
BLAST of CsGy1G022060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65670.15.3e-63100.00hypothetical protein Csa_1G481720 [Cucumis sativus][more]
XP_008457541.12.3e-5085.63PREDICTED: zinc finger protein ZAT12-like [Cucumis melo][more]
XP_022949001.11.4e-2672.22zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata][more]
XP_022997819.18.9e-2672.22zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima][more]
XP_022158363.11.9e-2047.13zinc finger protein ZAT12-like [Momordica charantia][more]
BLAST of CsGy1G022060 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28710.11.2e-1151.92C2H2-type zinc finger family protein[more]
AT2G37430.14.9e-1046.47C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G59820.11.4e-0973.53C2H2-type zinc finger family protein[more]
AT3G46080.11.2e-0873.68C2H2-type zinc finger family protein[more]
AT2G28200.11.6e-0882.76C2H2-type zinc finger family protein[more]
BLAST of CsGy1G022060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SLD4|ZAT11_ARATH8.8e-0946.47Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1[more]
sp|Q42410|ZAT12_ARATH2.6e-0873.53Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1[more]
sp|Q9LX85|ZAT8_ARATH2.2e-0773.68Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1[more]
sp|Q681X4|ZAT5_ARATH2.8e-0782.76Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1[more]
sp|Q42453|ZAT7_ARATH3.7e-0768.42Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1[more]
BLAST of CsGy1G022060 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LUQ6|A0A0A0LUQ6_CUCSA3.5e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G481720 PE=4 SV=1[more]
tr|A0A1S3C722|A0A1S3C722_CUCME1.5e-5085.63zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1[more]
tr|A0A2P6QIB4|A0A2P6QIB4_ROSCH3.3e-1361.19Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm... [more]
tr|A0A2P6QIA9|A0A2P6QIA9_ROSCH7.4e-1359.15Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm... [more]
tr|A0A1S4C4V0|A0A1S4C4V0_TOBAC1.7e-1251.85zinc finger protein ZAT11-like OS=Nicotiana tabacum OX=4097 GN=LOC107815184 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G022060.1CsGy1G022060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 50..72
e-value: 0.24
score: 20.5
coord: 87..109
e-value: 0.11
score: 21.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 89..109
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 52..72
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 50..77
score: 9.702
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 87..114
score: 8.663
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 29..113
e-value: 4.4E-10
score: 41.5
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 49..74
e-value: 3.7E-12
score: 45.8
coord: 86..110
e-value: 1.2E-9
score: 37.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 12..115
NoneNo IPR availablePANTHERPTHR26374:SF198ZINC FINGER PROTEIN ZAT11coord: 12..115
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 48..109

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G022060Cla013282Watermelon (97103) v1cgybwmB069
CsGy1G022060Cla008281Watermelon (97103) v1cgybwmB023
CsGy1G022060Csa1G481720Cucumber (Chinese Long) v2cgybcuB002
CsGy1G022060MELO3C020703Melon (DHL92) v3.5.1cgybmeB023
CsGy1G022060ClCG03G001900Watermelon (Charleston Gray)cgybwcgB044
CsGy1G022060ClCG02G020420Watermelon (Charleston Gray)cgybwcgB028
CsGy1G022060CSPI01G22480Wild cucumber (PI 183967)cgybcpiB002
CsGy1G022060CmaCh20G004270Cucurbita maxima (Rimu)cgybcmaB117
CsGy1G022060CmaCh01G005670Cucurbita maxima (Rimu)cgybcmaB104
CsGy1G022060CmaCh02G008270Cucurbita maxima (Rimu)cgybcmaB121
CsGy1G022060CmoCh02G008320Cucurbita moschata (Rifu)cgybcmoB111
CsGy1G022060CmoCh01G005940Cucurbita moschata (Rifu)cgybcmoB098
CsGy1G022060Lsi10G013480Bottle gourd (USVL1VR-Ls)cgyblsiB006
CsGy1G022060Lsi02G013930Bottle gourd (USVL1VR-Ls)cgyblsiB027
CsGy1G022060Cp4.1LG02g13240Cucurbita pepo (Zucchini)cgybcpeB099
CsGy1G022060Cp4.1LG05g08890Cucurbita pepo (Zucchini)cgybcpeB138
CsGy1G022060MELO3C020703.2Melon (DHL92) v3.6.1cgybmedB021
CsGy1G022060CsaV3_1G033660Cucumber (Chinese Long) v3cgybcucB001
CsGy1G022060Cla97C02G046380Watermelon (97103) v2cgybwmbB027
CsGy1G022060Cla97C03G052910Watermelon (97103) v2cgybwmbB042
CsGy1G022060Bhi10G000538Wax gourdcgybwgoB018
CsGy1G022060Bhi08G000333Wax gourdcgybwgoB038
CsGy1G022060Carg12339Silver-seed gourdcarcgybB0448
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G022060Cucurbita maxima (Rimu)cgybcmaB075
CsGy1G022060Cucurbita maxima (Rimu)cgybcmaB118
CsGy1G022060Cucurbita moschata (Rifu)cgybcmoB069
CsGy1G022060Cucurbita moschata (Rifu)cgybcmoB109
CsGy1G022060Cucurbita pepo (Zucchini)cgybcpeB035
CsGy1G022060Cucurbita pepo (Zucchini)cgybcpeB071
CsGy1G022060Silver-seed gourdcarcgybB0316
CsGy1G022060Silver-seed gourdcarcgybB0341
CsGy1G022060Silver-seed gourdcarcgybB0724
CsGy1G022060Wax gourdcgybwgoB016