CsGy1G017730.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACGAGACGACGAAAAACCCCAACCGATTATGAAAGAGACCAAGAAACCATAGCATCTCCGTCTTCGCAGGAACTATGGCTTTCGAAGCTGACTCATCTGGAGGCTCCGATGAAGTTCATACCGACGTTCTATCGGAATCAAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTATGGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCTGTTGGCCTTATTTACCCTGCCGAGTGTAAAGCTTTGAGAGCTGATTATGCCAAACTTTGCAGAGCTTCTTGGGTAACTGTCGTTCCTCGATCACTGGAGATTACAATAACATATTGGGTCTATTAGGTTTTGATGGTGTTTATGATTTTGTAGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAGATTTGAGGAGAGGTCCGTTGATACTTCCTCAGCCTTACACTTTTAAGCCCACTAATTAAACTAAACACAATCCCTCCGGATCAACATTGGGCGGTCAGAGTCTCATGTTTTTGCTTCTTCTTCTTTTACTATGTATAGAAATGACTGTGGAAATAGATTTAGTAATAATGTCCATCTTCTTGCCAGACTACAAAACCTTAATACCCTTTTTGGGCATGTAATTTTAAGGTATGATGTAGAATTAAATTTACCTTCACTTAAGCTTTTGGGTGAAGGCAAATTTAATAGAATATCTAACACTCCCCTAATAGAACACTTTTACCCACAATCTTAAGTTTGTGTGACTGTTCTTCATATTTCAAATCCACAAGTGAGGGGAGTGTTAGATGATATATAATTAAATTTACCTTTCACCCATTAGCTTTAGCTTTTAGCTCAATCAGTGATTTAAGAGGTAGTTCTAACTTCTTGCATGACCGTGATGTAAAAACTAAAGATACAAGACCCTAACACTTGTAATTTCGTTATCTAATAAAAAATCACTTCGTTATTTGGACGCTTTATTAGTTTGTAGAAGTAATATTTTGAATTCTTGGCTGCATAACTTCTTTGAATGTGCTTGTTTGGCTCACGATATGAGAGTTTCTTCATTTGGCTGTCTAGTAATGAACTCTCAATCACAATTTGAATAGGAAGAAATGTAAAGTGCATGGGGCATATTGGCTAGTTGCATTAATTTTAGCCTTTAGGAACAGATATTCAACTCAAATATATAAGACTTTAAGGAAAATGTTTTTTCTCTGATCTCTTTGTCAGTGGAAGTTTAAATACTATGGATTGAATTCAAAGAAGGAATCCAAACTTGGCTTTCTCCAAACATCTGTCTTTGTTGTTGCAAGAGTAAAGATTTTAGCAATCACCAGTTCCTCCATGGTGTGACTTACATTATCAACAGTTTTAATTTGTTTGGTGTCCTTCAAAGAAATTGGGAAGATGTTCTTTTTGAATGGTTGTCTAGTTGGTGGATCAAAGTGAAGGCTAGAATCTTGTGGAGTAGTGCTTGTTTACCTTTCCTCTCAAGCTATATGGAAGGAAAGAAATTGAAGATTGTTCCCAGATAAGGTCTCGACTTCCAATGTTTTTATCGAAGATGCACAATTCACTGTCTCTTGGAGTGCTCTACGCAGTTTTTTTGTAAAACACAACATGCTCTCAAATTTTAGATGGAGATCATTCCTTTTTTATCCTTCTATTTTAGGCTTAGGATCTCTTTTCCCTAAGGCCTTTTGTATGTTGTTCACTTTATTTTGTTTATAAGGTTTCTCCGTTTCTTATCAAGAGAAAAAAAAATCTCAACTAAGTGATATCTCATTGACTTGGAAGCTCAAGTGTGGTTCATCCATCTTCATGGACACGTTAGCTAGTTTTGCTTGTAGATGATTATGCTTAGCATTTGATTGAGGCTCTACAAAACTTTTCTGCCATACATCAGTTCTGCAAAATGTTAGGAACCAAGGTAGTATATGATGCCTTTGTCTCACATTGGTTAGAATGGGATGACCAATATGGTACTTAAGTGGCTTGGTTCTTCCACCTCAACTGGCTTGGTTCACCAACCCATACCGCTCTCCTAGGTACTTAAGTACCTAAAATGGTATCATAGCAAGTTATTGACGTTTCAGAGTGGAACTGACCGAGGGTTCTAATCGGGTGTGGCCAAGTGAAGTGCCATCAGAGTAGCCATTAGGACGCCGACTTTATGGGGATGAGGTATTGTTAGGAACCAAGGTAGTATGAGATGCCTTCGTCCCACATTGGTTAGAATGGGATGACCAATGTGATTCTTAAGTGGCTTGGTTATCTCACCCCAACAACTGGCAGTTGAGGTGTGGTTTTTCGAGGTGCCTAAGTACCTAACACAAAATCTACTAAAAGCTCTCAAATTATGGACATTCTCTTTGTTACTGTTTAAAGTTTGAGGCTCACTGAAGTGCAGTAGGCCGTAGCCTTTAAGAGCATAGAAGGTTTGAACTTTTTTTTGTGAGATGCTATATGTATATGTGGAAGTATTATACAGAAAAATAAACATCTTAGAATTAGATGATTATAATAAAGAAAAAGTTATAGCACATGAAACTTAAAGGTTAGAAAGGTTCAAACTTTCTGTACTTATAGAATGTTTGGGTGAGAATGAAGGAAAAGAATGGTCGGGAAATAGCAGTTAAAGCAAGGTCTAATCTAGTAATAGTAAAAGAGAGACCCTATCTAGATATATATATAAAGAACCCGTAAGACACAGTTTCTTTTGTGTGCCTACCAGGCCCCTGCCTCATGGAGCTTTTTAAAACACGCTAGTTTGTGAATGTGAAAACAAATACGCAAGAGATTGATATACCGATAAACAGGACAAGATTCTGTTGGTATCCTGCATTTGCCTAAAGATTACCATAGCAGAAGATACACTTGAATGGCAAGTGACGTATTTGAGATGGACACTGATCCGTGATCAAAATCACAAACAAAGATGATAGACTAACTCTAAAACATAACAACATATTCAAAATGAAACATAATAAACTAAGGAGGTTCTAACTTTCTAATTCCTATTAGAAAATATTCCAATATTAACAAACATAAAACTGCTGTGAAGTTCTCTTAGATTGGAGTCCTCTTTTACAGGCGAGGTCGAAGTTTTTTTTTGCTGGGTCTTTTCTTTTTTCTTTTCTGTTGTTTTTGTATGCCCTTGCATATTCTTTTCGTACCCCTCCTTAAAAGCGTTCCCAACAAAAAATGAGATTGCAAGTACTGCAAATTTTATTAAAACTGATTGTCATACCAAAAAAATGGGGTTGTAAGTACTGGAAGTGTATTCCGTTTTTCAGTTATCTCGTGAGGAAGGCAGCATCGAACCACGAGGCTCCATTGCACTGACTACTGATTGGATGTCTTGGGACTTGGGAGTAAGACTGCTGATTGAAATAGGTTTTCTGGACGTGGTAAGACCAAGAGCTCTTGTTAAGGAACACCCTTTGATTAACGAGTCTTTTTCTTCTCCTCCTAGAAAATTAGGATATCTTTTAGGGGCTGTTGGTCCACCCGATTTCATAAGTCAATGTTATTTAACTCGACCATACCACTTTAATAGTGGTCACTATTGAAGTTTACATGTTTAGTAAAGAGCTTCATATTTTCCTCTCTCTCCTTTTTTCTAATGTTTCATAACTTCAAACTAAACAGTTCTATAACCCAAATACAAACTTCCTAATCTTTAG GGACGAGACGACGAAAAACCCCAACCGATTATGAAAGAGACCAAGAAACCATAGCATCTCCGTCTTCGCAGGAACTATGGCTTTCGAAGCTGACTCATCTGGAGGCTCCGATGAAGTTCATACCGACGTTCTATCGGAATCAAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTATGGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCTGTTGGCCTTATTTACCCTGCCGAGTGTAAAGCTTTGAGAGCTGATTATGCCAAACTTTGCAGAGCTTCTTGGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAGATTTGAGGAGAGTTATCTCGTGAGGAAGGCAGCATCGAACCACGAGGCTCCATTGCACTGACTACTGATTGGATGTCTTGGGACTTGGGAGTAAGACTGCTGATTGAAATAGGTTTTCTGGACGTGGTAAGACCAAGAGCTCTTGTTAAGGAACACCCTTTGATTAACGAGTCTTTTTCTTCTCCTCCTAGAAAATTAGGATATCTTTTAGGGGCTGTTGGTCCACCCGATTTCATAAGTCAATGTTATTTAACTCGACCATACCACTTTAATAGTGGTCACTATTGAAGTTTACATGTTTAGTAAAGAGCTTCATATTTTCCTCTCTCTCCTTTTTTCTAATGTTTCATAACTTCAAACTAAACAGTTCTATAACCCAAATACAAACTTCCTAATCTTTAG ATGGCTTTCGAAGCTGACTCATCTGGAGGCTCCGATGAAGTTCATACCGACGTTCTATCGGAATCAAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTATGGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCTGTTGGCCTTATTTACCCTGCCGAGTGTAAAGCTTTGAGAGCTGATTATGCCAAACTTTGCAGAGCTTCTTGGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAGATTTGAGGAGAGTTATCTCGTGA MAFEADSSGGSDEVHTDVLSESRQACYKARDAFYACMEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRVIS
BLAST of CsGy1G017730.1 vs. NCBI nr
Match: XP_011655954.1 (PREDICTED: cytochrome c oxidase assembly factor 6 isoform X3 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 8.9e-51 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. NCBI nr
Match: XP_004146692.1 (PREDICTED: uncharacterized protein LOC101212489 isoform X2 [Cucumis sativus] >XP_011655945.1 PREDICTED: uncharacterized protein LOC101212489 isoform X2 [Cucumis sativus] >KGN65243.1 hypothetical protein Csa_1G269850 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 2.9e-49 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. NCBI nr
Match: XP_008443874.1 (PREDICTED: uncharacterized protein LOC103487365 isoform X2 [Cucumis melo]) HSP 1 Score: 203.0 bits (515), Expect = 4.9e-49 Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. NCBI nr
Match: XP_008443871.1 (PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo] >XP_008443872.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47 Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. NCBI nr
Match: XP_022134674.1 (uncharacterized protein LOC111006886 [Momordica charantia] >XP_022134675.1 uncharacterized protein LOC111006886 [Momordica charantia]) HSP 1 Score: 183.7 bits (465), Expect = 3.1e-43 Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. TAIR10
Match: AT5G58005.1 (Cytochrome c oxidase, subunit Vib family protein) HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. TrEMBL
Match: tr|A0A0A0LTX1|A0A0A0LTX1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269850 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.9e-49 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. TrEMBL
Match: tr|A0A1S3B914|A0A1S3B914_CUCME (uncharacterized protein LOC103487365 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487365 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.2e-49 Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. TrEMBL
Match: tr|A0A1S3B9T5|A0A1S3B9T5_CUCME (uncharacterized protein LOC103487365 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487365 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.0e-47 Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. TrEMBL
Match: tr|A0A2I4H2N2|A0A2I4H2N2_9ROSI (cytochrome c oxidase assembly factor 6 OS=Juglans regia OX=51240 GN=LOC109012980 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 7.0e-36 Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of CsGy1G017730.1 vs. TrEMBL
Match: tr|I1JGN2|I1JGN2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100780570 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-34 Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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