CsGy1G010590.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G010590.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Chr1 : 6671771 .. 6673412 (-)
Sequence length	1038

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATTGCTATTACCACAATTACGACCCTCCATTTCATTCGCCGCCACTCTACGGCGGAGCTGGCGACGGTATCTGCACTTTTACACATTTGCGCGGGAAAACCGATGGCTGTGAGTGCTTCAGTGGCGACTTCCAACCTCATTCTGATGATAACCAACTAGCTTCATTCGCAGTGCGCAGCTTCTCTCTTGTTGCCGTCGAGTTCCGACTGCGCGAGAGCAATCAACTTCCAGTGTTGGGAGCAGATAGAAACTGCGAAGTTTTTAAGAAGTTGTTTTATGGCATAGAGTTTCGTGTTCTTTGATTCCCATATCCTCTGCGCTCTCTTTGGCGAAGCTTGGGAGGTAAGATACTGTTGTTGATGACTGGGTTGCGACTTTCTCTGACTTATATTTCTTGTTTGCTATACTTGAAGGAAGTTGGGGTGTTTATTTTTTGCTTCACACAATTTAATGAACATTATATTGGTGTATTTAGAGGTTTACTTAGTTGTACTTCTCTTCGTTTTGTTTTGCTTGCAGATATTAGGGTATTTCATGAACTGGGTTTTTGGCATTCTATGATTTTTAGCCTCCTTTTTCTGTGGGGAAGTTCTGTTTTCAGACGAGGTTTTCATACGGGTAAGAAGCTTTTAAGTCCAAGCACCGAGGATATCATTTGTAAAGCAATTTGTGTTAATTTAAAACAGAGAAGATGGAAGTTCTTAGAGCAAGTATCACCAAGTCTCACGAATTCGTTGGTCTGTCGTGTTGTTCGCGAGTTTCGCAACTCTCCACAGTTAGCTTTAGAATTCTACAACTGGGTTGAGGCAAGAGACAACTTTTCCCACTCATTAGAATCACGTTGTACCTTGGTTCACGTTTTAGTCAATTCCAGAAACTTTAATGATGCCTTGTCTATCATGGAGAGTTTAATACTTAAAATGGTAAGTCTCCATTGGAGGTTCTGGGAGGATTGATGAATAGCTACGAAATTTGTAATTCAAATCCTGCAGTCTTTGAGCACGGGTGAGGACGTGCACTCAGTTAAGGAGCGTGGAAGGTGCATATGACGTAATAAGAAAGTTGAGACTAGAAGGTTTTTGGGTTACGATTCATGCTTGGAATAACTTCTTAAATCTACTTTTAAAGTTGGGCGAGACTGATAAGTTTTAGAACATGTATAAGGAAATGATTGCCAGTGGTTACAGTGAAAATGTGAATACTTTTAATTTGATTATTTATGCTTTATGCAATGAATGTAAATTACTAGAAGCAATATATGTTGTTTATTTGATGCTGAAGATTGAAATTTGGCCTAATGTCGTTACTTTTAATATGATCATCGATAAAGCAAATAAAATGGGTGAGATGGATCTTGCTCTAAAGCTGACAAGGAACACTGAGGTGATTTCAGGAGGCAGTGTTTCGCCTAATATAGTTGCCTATAATTGTATCATTAATGGATTCTGCAAGATAAGGAGGTTAGAGTCTGCAAAAAATGTTCTTGGTGAAATGATTAAGCTGGGAATATATTTCAATGAGAGAACATATGCCACTTTGATTGACGGATATGCTAGAAAAGGGAGTTTGGATGTGGCATTTAGGTTATGTGATGAAATGGTTGAAATGAGGTTTGATTCCAGACACTTTTGTATATAA

mRNA sequence

ATTGATTGCTATTACCACAATTACGACCCTCCATTTCATTCGCCGCCACTCTACGGCGGAGCTGGCGACGGTATCTGCACTTTTACACATTTGCGCGGGAAAACCGATGGCTGTGAGTGCTTCAGTGGCGACTTCCAACCTCATTCTGATGATAACCAACTAGCTTCATTCGCAGTGCGCAGCTTCTCTCTTGTTGCCGTCGAGTTCCGACTGCGCGAGAGCAATCAACTTCCAGTGTTGGGAGCAGATAGAAACTGCGAAAGTTTCGTGTTCTTTGATTCCCATATCCTCTGCGCTCTCTTTGGCGAAGCTTGGGAGATATTAGGCCTCCTTTTTCTGTGGGGAAGTTCTGTTTTCAGACGAGGTTTTCATACGGGTAAGAAGCTTTTAAGTCCAAGCACCGAGGATATCATTTGTAAAGCAATTTGTGTTAATTTAAAACAGAGAAGATGGAAGTTCTTAGAGCAAGTATCACCAAGTCTCACGAATTCGTTGGTCTGTCGTGTTGTTCGCGAGTTTCGCAACTCTCCACAGTTAGCTTTAGAATTCTACAACTGGGTTGAGGCAAGAGACAACTTTTCCCACTCATTAGAATCACGTTGTACCTTGGTTCACGTTTTAGTCAATTCCAGAAACTTTAATGATGCCTTGTCTATCATGGAGAGTTTAATACTTAAAATGATTGAAATTTGGCCTAATGTCGTTACTTTTAATATGATCATCGATAAAGCAAATAAAATGGGTGAGATGGATCTTGCTCTAAAGCTGACAAGGAACACTGAGGTGATTTCAGGAGGCAGTGTTTCGCCTAATATAGTTGCCTATAATTGTATCATTAATGGATTCTGCAAGATAAGGAGGTTAGAGTCTGCAAAAAATGTTCTTGGTGAAATGATTAAGCTGGGAATATATTTCAATGAGAGAACATATGCCACTTTGATTGACGGATATGCTAGAAAAGGGAGTTTGGATGTGGCATTTAGGTTATGTGATGAAATGGTTGAAATGAGGTTTGATTCCAGACACTTTTGTATATAA

Coding sequence (CDS)

ATTGATTGCTATTACCACAATTACGACCCTCCATTTCATTCGCCGCCACTCTACGGCGGAGCTGGCGACGGTATCTGCACTTTTACACATTTGCGCGGGAAAACCGATGGCTGTGAGTGCTTCAGTGGCGACTTCCAACCTCATTCTGATGATAACCAACTAGCTTCATTCGCAGTGCGCAGCTTCTCTCTTGTTGCCGTCGAGTTCCGACTGCGCGAGAGCAATCAACTTCCAGTGTTGGGAGCAGATAGAAACTGCGAAAGTTTCGTGTTCTTTGATTCCCATATCCTCTGCGCTCTCTTTGGCGAAGCTTGGGAGATATTAGGCCTCCTTTTTCTGTGGGGAAGTTCTGTTTTCAGACGAGGTTTTCATACGGGTAAGAAGCTTTTAAGTCCAAGCACCGAGGATATCATTTGTAAAGCAATTTGTGTTAATTTAAAACAGAGAAGATGGAAGTTCTTAGAGCAAGTATCACCAAGTCTCACGAATTCGTTGGTCTGTCGTGTTGTTCGCGAGTTTCGCAACTCTCCACAGTTAGCTTTAGAATTCTACAACTGGGTTGAGGCAAGAGACAACTTTTCCCACTCATTAGAATCACGTTGTACCTTGGTTCACGTTTTAGTCAATTCCAGAAACTTTAATGATGCCTTGTCTATCATGGAGAGTTTAATACTTAAAATGATTGAAATTTGGCCTAATGTCGTTACTTTTAATATGATCATCGATAAAGCAAATAAAATGGGTGAGATGGATCTTGCTCTAAAGCTGACAAGGAACACTGAGGTGATTTCAGGAGGCAGTGTTTCGCCTAATATAGTTGCCTATAATTGTATCATTAATGGATTCTGCAAGATAAGGAGGTTAGAGTCTGCAAAAAATGTTCTTGGTGAAATGATTAAGCTGGGAATATATTTCAATGAGAGAACATATGCCACTTTGATTGACGGATATGCTAGAAAAGGGAGTTTGGATGTGGCATTTAGGTTATGTGATGAAATGGTTGAAATGAGGTTTGATTCCAGACACTTTTGTATATAA

Protein sequence

IDCYYHNYDPPFHSPPLYGGAGDGICTFTHLRGKTDGCECFSGDFQPHSDDNQLASFAVRSFSLVAVEFRLRESNQLPVLGADRNCESFVFFDSHILCALFGEAWEILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILKMIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRFDSRHFCI

Homology

[Close]

BLAST of CsGy1G010590.1 vs. NCBI nr
Match: ADN34051.1 (pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo])

HSP 1 Score: 310.1 bits (793), Expect = 9.6e-81
Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           +    FL GS VFRRGF TGKKLLSPSTEDII KAICVNLKQRRWKFLEQVSPSLTNSLV
Sbjct: 2   VFSFTFLRGSFVFRRGFRTGKKLLSPSTEDIIYKAICVNLKQRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFRNSPQLALEFYNWVEARDNFSHSLES CTLVHVLVNSRNFNDALSIMESL+LK
Sbjct: 62  CRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 NGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. NCBI nr
Match: XP_008441068.2 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 9.6e-81
Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           +    FL GS VFRRGF TGKKLLSPSTEDII KAICVNLKQRRWKFLEQVSPSLTNSLV
Sbjct: 2   VFSFTFLRGSFVFRRGFRTGKKLLSPSTEDIIYKAICVNLKQRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFRNSPQLALEFYNWVEARDNFSHSLES CTLVHVLVNSRNFNDALSIMESL+LK
Sbjct: 62  CRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 NGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. NCBI nr
Match: XP_022923680.1 (pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita moschata])

HSP 1 Score: 281.6 bits (719), Expect = 3.7e-72
Identity = 166/317 (52.37%), Postives = 175/317 (55.21%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           I   +FL  S VF RGFHTGKKL SPSTEDIICKAICVNLK RRWKFLEQVSPSLTNSLV
Sbjct: 2   IFSFIFLRRSCVFSRGFHTGKKLFSPSTEDIICKAICVNLKHRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFR SPQLALEFYNWVEARDN SHSLES CTLVHVLVNSRNF+DALSIM+SL+LK
Sbjct: 62  CRVVREFRTSPQLALEFYNWVEARDNISHSLESCCTLVHVLVNSRNFDDALSIMKSLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 DGKSPLEVLGGLIDSYEICSSNSAVFDALVRTCTQLGTAEGAYNVIKKLRDEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNQLLKLDEIDKFWNMYKEMVASGYIENVNTFNLIIYAFCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. NCBI nr
Match: XP_023519211.1 (pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71
Identity = 165/317 (52.05%), Postives = 174/317 (54.89%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           I   +FL  S VF RGFHTGKKL SPSTEDIICKAICVNLK RRWKFLEQVSPSLTNSLV
Sbjct: 2   IFSFIFLRRSCVFSRGFHTGKKLFSPSTEDIICKAICVNLKHRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFR SPQLALEFYNWVEARDN SHSLES CTLVHVLVNSRNF+DALSIM+SL+LK
Sbjct: 62  CRVVREFRTSPQLALEFYNWVEARDNISHSLESCCTLVHVLVNSRNFDDALSIMKSLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 DGKSPLEVLGGLIDSYEICSSNPAVFDALVRTCTQLGTAEGAYNVIKKLRDEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNQLLKLDEIDKFWNMYKEMVASGYIENVNTFNLIIYAFCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. NCBI nr
Match: XP_023001240.1 (pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70
Identity = 162/317 (51.10%), Postives = 171/317 (53.94%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           I   +FL  S  F RGFHTGKK  SPST DIICKAICVNLK RRWKFLEQVSPSLTNSLV
Sbjct: 2   IFSFIFLRRSCFFSRGFHTGKKFFSPSTVDIICKAICVNLKHRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFR SPQLALEFYNWVEARDN SHSLES CTLVHVL+NSRNF+DALSIM+SL+LK
Sbjct: 62  CRVVREFRTSPQLALEFYNWVEARDNISHSLESCCTLVHVLINSRNFDDALSIMKSLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 DGKSPLEVLGGLIDSYEICSSNPAVFDALVRTCTQLGTAEGAYNVIKKLKVEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNQLLKLDEIDKFWNMYKEMVASGYIENVNTFNLIIYAFCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. TAIR10
Match: AT1G11710.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 6.8e-28
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           + G +F   +S   R FH  KK  +P  EDI+  A+C+NL+QRRW  L Q S SLTN L+
Sbjct: 1   MFGHVFSRRTSFLVRCFHVAKKFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLI 60

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHS---LESRCTLVHVLVNSRNFNDALSIMESL 225
            RV+REFR+SP+LALEFYNWV   +  + S    E+ C ++H+LV SR F+DALSIM +L
Sbjct: 61  SRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANL 120

[Close]

BLAST of CsGy1G010590.1 vs. TAIR10
Match: AT5G66631.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 9.2e-09
Identity = 51/198 (25.76%), Postives = 96/198 (48.48%), Query Frame = 0


Query: 140 KAICVNLKQRRWK-----FLEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFS 199
           KA+  +LK  +W       LE+ +   TN LVC+++R FR +P+ A  F+ WV  +  F+
Sbjct: 352 KALATSLK--KWSSDAVTALEEANFVWTNLLVCKMLRNFR-APETAWSFFCWVAIQPGFT 411

Query: 200 HSLESRCTLVHVLVNSRNFNDALSIMESLILKM-IE-IWPNVVTFNMIIDKANKMGEMDL 259
           H   +   ++ +L      N  + +++ LI K+ IE I     T  +IID      + + 
Sbjct: 412 HDAYTIERMMAMLAR----NGQVELVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKPEA 471

Query: 260 ALKLTRNTEVISGGSVSPNI-VAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYA 319
           A+K+      + G     N+ + Y+ ++    K +R   A   L +M+  G+  + +T++
Sbjct: 472 AIKVFNEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDMMLTGVSPDIQTFS 531

Query: 320 TLIDGYARKGSLDVAFRL 330
            L+  +A +G +    RL
Sbjct: 532 GLMYHFALQGEIQTVERL 542

[Close]

BLAST of CsGy1G010590.1 vs. TAIR10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 3.5e-08
Identity = 49/208 (23.56%), Postives = 94/208 (45.19%), Query Frame = 0


Query: 146 LKQRRWK---FLEQVSPSLTNSLVCRVVREFR-NSPQLALEFYNWVEARDNFSHSLESRC 205
           LKQ  W+       +S  +   +V  V+R  R + P   L F+NWV+++      L+S  
Sbjct: 42  LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFS 101

Query: 206 TLVHVLVNSRNFNDALSIMESLILK---MIEIWPNV--------------VTFNMIIDKA 265
            L   L N  +F  ALS++E +I +   + E+W ++              V F ++ D  
Sbjct: 102 FLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGY 161

Query: 266 NKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIY 325
              G ++ A+ +  ++    G  + P +     +++   +  RL+   +V   M++  + 
Sbjct: 162 IAKGYIEEAVFVFSSS---MGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 221

Query: 326 FNERTYATLIDGYARKGSL----DVAFR 329
           F+ +TY  LI  + R G++    DV F+
Sbjct: 222 FDVKTYHMLIIAHCRAGNVQLGKDVLFK 246

[Close]

BLAST of CsGy1G010590.1 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 5.9e-08
Identity = 48/227 (21.15%), Postives = 100/227 (44.05%), Query Frame = 0


Query: 135 EDIICKAICVNLKQRRWKFLEQVS---PSLTNSLVCRVVR--EFRNSPQLALEFYNWVEA 194
           E  + K +   L   +  FLE ++   P +T  L+  ++        P+  + F+ W + 
Sbjct: 8   ESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQT 67

Query: 195 RDNFSHSLESRCTLVHV---LVNSRNFNDA--------------LSIMESLILKMIEIW- 254
               +   +S   L+ V   L++   F DA              LS+  SL+   + +  
Sbjct: 68  SIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSP 127

Query: 255 -PNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIR---R 314
            P+   F++ +      G+  +AL++ +    +    + PN++  N ++ G  +      
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRL---KLKPNLLTCNTLLIGLVRYPSSFS 187

Query: 315 LESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMV 335
           + SA+ V  +M+K+G+  N +T+  L++GY  +G L+ A  + + MV
Sbjct: 188 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231

[Close]

BLAST of CsGy1G010590.1 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 166 VCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLIL 225
           V RV+ E +  P+LA +F+ W   R+ F HS+ES C + H+L  +R + DA S+++ ++L
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170

[Close]

BLAST of CsGy1G010590.1 vs. Swiss-Prot
Match: sp|Q9SAA6|PPR34_ARATH (Pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11710 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-26
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           + G +F   +S   R FH  KK  +P  EDI+  A+C+NL+QRRW  L Q S SLTN L+
Sbjct: 1   MFGHVFSRRTSFLVRCFHVAKKFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLI 60

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHS---LESRCTLVHVLVNSRNFNDALSIMESL 225
            RV+REFR+SP+LALEFYNWV   +  + S    E+ C ++H+LV SR F+DALSIM +L
Sbjct: 61  SRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANL 120

[Close]

BLAST of CsGy1G010590.1 vs. Swiss-Prot
Match: sp|Q0WP85|PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.7e-08
Identity = 56/248 (22.58%), Postives = 105/248 (42.34%), Query Frame = 0


Query: 116 SSVFRRGFHTGKKLLSPSTE-DIICKAICVNLKQRRWKFLEQV----SPSLTNSLVCRVV 175
           S++   GF      L PS++ ++I + +  N     + F+E        SLT +L+ + +
Sbjct: 21  STIISAGFTLNLPKLEPSSDAELISQMLITN--HNPFHFMESSLQLNGISLTPNLIHQTL 80

Query: 176 REFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILKMIEI 235
              R++ ++AL F+ ++ +  + S +  S   ++ +L   R F+    ++  LI++M + 
Sbjct: 81  LRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFD----VVRQLIVEMDQT 140

Query: 236 WP-----------------------------------NVVTFNMIIDKANKMGEMDLALK 295
            P                                    +V F  ++D   K G   +A+ 
Sbjct: 141 SPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEFGFLLDTLCKYGYTKMAVG 200

Query: 296 LTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLID 324
           +    +   G         Y  +I G+CK+RR++ A+  L EMI+ GI  N  TY  L++
Sbjct: 201 VFNERKEEFGSDEK----VYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLN 258

[Close]

BLAST of CsGy1G010590.1 vs. Swiss-Prot
Match: sp|B3H4P1|PP450_ARATH (Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana OX=3702 GN=At5g66631 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-07
Identity = 51/198 (25.76%), Postives = 96/198 (48.48%), Query Frame = 0


Query: 140 KAICVNLKQRRWK-----FLEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFS 199
           KA+  +LK  +W       LE+ +   TN LVC+++R FR +P+ A  F+ WV  +  F+
Sbjct: 352 KALATSLK--KWSSDAVTALEEANFVWTNLLVCKMLRNFR-APETAWSFFCWVAIQPGFT 411

Query: 200 HSLESRCTLVHVLVNSRNFNDALSIMESLILKM-IE-IWPNVVTFNMIIDKANKMGEMDL 259
           H   +   ++ +L      N  + +++ LI K+ IE I     T  +IID      + + 
Sbjct: 412 HDAYTIERMMAMLAR----NGQVELVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKPEA 471

Query: 260 ALKLTRNTEVISGGSVSPNI-VAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYA 319
           A+K+      + G     N+ + Y+ ++    K +R   A   L +M+  G+  + +T++
Sbjct: 472 AIKVFNEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDMMLTGVSPDIQTFS 531

Query: 320 TLIDGYARKGSLDVAFRL 330
            L+  +A +G +    RL
Sbjct: 532 GLMYHFALQGEIQTVERL 542

[Close]

BLAST of CsGy1G010590.1 vs. Swiss-Prot
Match: sp|Q9FIT7|PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.3e-07
Identity = 49/208 (23.56%), Postives = 94/208 (45.19%), Query Frame = 0


Query: 146 LKQRRWK---FLEQVSPSLTNSLVCRVVREFR-NSPQLALEFYNWVEARDNFSHSLESRC 205
           LKQ  W+       +S  +   +V  V+R  R + P   L F+NWV+++      L+S  
Sbjct: 42  LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFS 101

Query: 206 TLVHVLVNSRNFNDALSIMESLILK---MIEIWPNV--------------VTFNMIIDKA 265
            L   L N  +F  ALS++E +I +   + E+W ++              V F ++ D  
Sbjct: 102 FLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGY 161

Query: 266 NKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIY 325
              G ++ A+ +  ++    G  + P +     +++   +  RL+   +V   M++  + 
Sbjct: 162 IAKGYIEEAVFVFSSS---MGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 221

Query: 326 FNERTYATLIDGYARKGSL----DVAFR 329
           F+ +TY  LI  + R G++    DV F+
Sbjct: 222 FDVKTYHMLIIAHCRAGNVQLGKDVLFK 246

[Close]

BLAST of CsGy1G010590.1 vs. Swiss-Prot
Match: sp|Q9ZVX5|PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 48/227 (21.15%), Postives = 100/227 (44.05%), Query Frame = 0


Query: 135 EDIICKAICVNLKQRRWKFLEQVS---PSLTNSLVCRVVR--EFRNSPQLALEFYNWVEA 194
           E  + K +   L   +  FLE ++   P +T  L+  ++        P+  + F+ W + 
Sbjct: 8   ESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQT 67

Query: 195 RDNFSHSLESRCTLVHV---LVNSRNFNDA--------------LSIMESLILKMIEIW- 254
               +   +S   L+ V   L++   F DA              LS+  SL+   + +  
Sbjct: 68  SIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSP 127

Query: 255 -PNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIR---R 314
            P+   F++ +      G+  +AL++ +    +    + PN++  N ++ G  +      
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRL---KLKPNLLTCNTLLIGLVRYPSSFS 187

Query: 315 LESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMV 335
           + SA+ V  +M+K+G+  N +T+  L++GY  +G L+ A  + + MV
Sbjct: 188 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231

[Close]

BLAST of CsGy1G010590.1 vs. TrEMBL
Match: tr|A0A1S3B385|A0A1S3B385_CUCME (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485289 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.4e-81
Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           +    FL GS VFRRGF TGKKLLSPSTEDII KAICVNLKQRRWKFLEQVSPSLTNSLV
Sbjct: 2   VFSFTFLRGSFVFRRGFRTGKKLLSPSTEDIIYKAICVNLKQRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFRNSPQLALEFYNWVEARDNFSHSLES CTLVHVLVNSRNFNDALSIMESL+LK
Sbjct: 62  CRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 NGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. TrEMBL
Match: tr|E5GC52|E5GC52_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.4e-81
Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           +    FL GS VFRRGF TGKKLLSPSTEDII KAICVNLKQRRWKFLEQVSPSLTNSLV
Sbjct: 2   VFSFTFLRGSFVFRRGFRTGKKLLSPSTEDIIYKAICVNLKQRRWKFLEQVSPSLTNSLV 61

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRVVREFRNSPQLALEFYNWVEARDNFSHSLES CTLVHVLVNSRNFNDALSIMESL+LK
Sbjct: 62  CRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLK 121

Query: 227 ------------------------------------------------------------ 286
                                                                       
Sbjct: 122 NGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHA 181

Query: 287 ------------------------------------------------------------ 304
                                                                       
Sbjct: 182 WNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLML 241

[Close]

BLAST of CsGy1G010590.1 vs. TrEMBL
Match: tr|A0A0A0LRK7|A0A0A0LRK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062950 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.0e-59
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 107 ILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLV 166
           I  LLFL GSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQ+SPSLTNSLV
Sbjct: 68  IFSLLFLRGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQLSPSLTNSLV 127

Query: 167 CRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 226
           CRV+REFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK
Sbjct: 128 CRVIREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILK 187

Query: 227 MIEI 231
           M+ +
Sbjct: 188 MVSL 191

[Close]

BLAST of CsGy1G010590.1 vs. TrEMBL
Match: tr|A0A0A0LU83|A0A0A0LU83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062940 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.0e-41
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 247 MGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFN 306
           MGEMDLALKLTRN EVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGI FN
Sbjct: 1   MGEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFN 60

Query: 307 ERTYATLIDGYARKGSLDVAFRLCDEMVEMR 338
           ERTYATLIDGYARKGSLDVAFRLCDEMVEMR
Sbjct: 61  ERTYATLIDGYARKGSLDVAFRLCDEMVEMR 91

[Close]

BLAST of CsGy1G010590.1 vs. TrEMBL
Match: tr|A0A061GNP0|A0A061GNP0_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_030228 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38
Identity = 103/293 (35.15%), Postives = 155/293 (52.90%), Query Frame = 0


Query: 95  HILCALFGEAWEILGLLFLWG------SSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQ 154
           H++C L    +     LFL G      +S+F RG H GK+   PS+EDI+ +AICVNL+ 
Sbjct: 52  HLICKL--RHFSKTLFLFLGGGSFKRRTSLFSRGLHVGKQFSCPSSEDIVFRAICVNLRH 111

Query: 155 RRWKFLEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLV 214
           RRWKFLEQVSPSLT++LV RVVREF+NSPQLALEF+NWV  +  F HSL S C L+HVLV
Sbjct: 112 RRWKFLEQVSPSLTDALVSRVVREFQNSPQLALEFHNWVGEKKGFPHSLASCCALIHVLV 171

Query: 215 NSRNFNDALSIMESLI----LKMIEIWPNV-----------VTFNMIIDKANKMGEMDLA 274
            SR F+DA++++E+L+    +  +E+   +             F+ ++    + G  + A
Sbjct: 172 KSRRFDDAITLLENLMHVNGMTPLEVLDGLEDSYELCDSFPAVFDTLVRACTQCGATEGA 231

Query: 275 LKLTRN---------------------------------TEVISGGSVSPNIVAYNCIIN 334
             + +                                   E++S   +  N+  +N +I 
Sbjct: 232 YAVVKKLRMKGRFVTIHAWNNFFSHLLKLNEIGRFWNVYNEMVSYRYIE-NVNTFNLVIY 291

The following BLAST results are available for this feature:

BLAST of CsGy1G010590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34051.1	9.6e-81	57.10	pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo]	[more]
XP_008441068.2	9.6e-81	57.10	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g...	[more]
XP_022923680.1	3.7e-72	52.37	pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita ...	[more]
XP_023519211.1	1.4e-71	52.05	pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita ...	[more]
XP_023001240.1	2.0e-70	51.10	pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita ...	[more]

BLAST of CsGy1G010590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11710.1	6.8e-28	50.41	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66631.1	9.2e-09	25.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G61990.1	3.5e-08	23.56	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G16880.1	5.9e-08	21.15	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G02150.1	1.3e-07	38.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy1G010590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SAA6\|PPR34_ARATH	1.2e-26	50.41	Pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Arabidop...	[more]
sp\|Q0WP85\|PP150_ARATH	9.7e-08	22.58	Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop...	[more]
sp\|B3H4P1\|PP450_ARATH	1.7e-07	25.76	Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9FIT7\|PP442_ARATH	6.3e-07	23.56	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]
sp\|Q9ZVX5\|PP156_ARATH	1.1e-06	21.15	Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy1G010590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B385\|A0A1S3B385_CUCME	6.4e-81	57.10	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11710, mito...	[more]
tr\|E5GC52\|E5GC52_CUCME	6.4e-81	57.10	Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267...	[more]
tr\|A0A0A0LRK7\|A0A0A0LRK7_CUCSA	4.0e-59	93.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062950 PE=4 SV=1	[more]
tr\|A0A0A0LU83\|A0A0A0LU83_CUCSA	1.0e-41	97.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062940 PE=4 SV=1	[more]
tr\|A0A061GNP0\|A0A061GNP0_THECC	3.9e-38	35.15	Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao OX=364...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G010590	CsGy1G010590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G010590.1	CsGy1G010590.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G010590.1.CDS.5	CsGy1G010590.1.CDS.5	CDS
CsGy1G010590.1.CDS.4	CsGy1G010590.1.CDS.4	CDS
CsGy1G010590.1.CDS.3	CsGy1G010590.1.CDS.3	CDS
CsGy1G010590.1.CDS.2	CsGy1G010590.1.CDS.2	CDS
CsGy1G010590.1.CDS.1	CsGy1G010590.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G010590.1.exon.5	CsGy1G010590.1.exon.5	exon
CsGy1G010590.1.exon.4	CsGy1G010590.1.exon.4	exon
CsGy1G010590.1.exon.3	CsGy1G010590.1.exon.3	exon
CsGy1G010590.1.exon.2	CsGy1G010590.1.exon.2	exon
CsGy1G010590.1.exon.1	CsGy1G010590.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 260..338 e-value: 1.1E-19 score: 72.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 145..259 e-value: 2.5E-11 score: 45.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 270..319 e-value: 2.9E-14 score: 52.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 273..306 e-value: 6.3E-8 score: 30.3 coord: 309..337 e-value: 9.4E-7 score: 26.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 197..242 e-value: 0.0011 score: 18.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 10.863
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 233..269 score: 6.511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 11.17
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 196..230 score: 5.437
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 110..224
None	No IPR available	PANTHER	PTHR24015:SF1586	SUBFAMILY NOT NAMED	coord: 110..224
None	No IPR available	PANTHER	PTHR24015:SF1586	SUBFAMILY NOT NAMED	coord: 229..337
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 229..337