CsGy1G010590 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATTGATTGCTATTACCACAATTACGACCCTCCATTTCATTCGCCGCCACTCTACGGCGGAGCTGGCGACGGTATCTGCACTTTTACACATTTGCGCGGGAAAACCGATGGCTGTGAGTGCTTCAGTGGCGACTTCCAACCTCATTCTGATGATAACCAACTAGCTTCATTCGCAGTGCGCAGCTTCTCTCTTGTTGCCGTCGAGTTCCGACTGCGCGAGAGCAATCAACTTCCAGTGTTGGGAGCAGATAGAAACTGCGAAGTTTTTAAGAAGTTGTTTTATGGCATAGAGTTTCGTGTTCTTTGATTCCCATATCCTCTGCGCTCTCTTTGGCGAAGCTTGGGAGGTAAGATACTGTTGTTGATGACTGGGTTGCGACTTTCTCTGACTTATATTTCTTGTTTGCTATACTTGAAGGAAGTTGGGGTGTTTATTTTTTGCTTCACACAATTTAATGAACATTATATTGGTGTATTTAGAGGTTTACTTAGTTGTACTTCTCTTCGTTTTGTTTTGCTTGCAGATATTAGGGTATTTCATGAACTGGGTTTTTGGCATTCTATGATTTTTAGCCTCCTTTTTCTGTGGGGAAGTTCTGTTTTCAGACGAGGTTTTCATACGGGTAAGAAGCTTTTAAGTCCAAGCACCGAGGATATCATTTGTAAAGCAATTTGTGTTAATTTAAAACAGAGAAGATGGAAGTTCTTAGAGCAAGTATCACCAAGTCTCACGAATTCGTTGGTCTGTCGTGTTGTTCGCGAGTTTCGCAACTCTCCACAGTTAGCTTTAGAATTCTACAACTGGGTTGAGGCAAGAGACAACTTTTCCCACTCATTAGAATCACGTTGTACCTTGGTTCACGTTTTAGTCAATTCCAGAAACTTTAATGATGCCTTGTCTATCATGGAGAGTTTAATACTTAAAATGGTAAGTCTCCATTGGAGGTTCTGGGAGGATTGATGAATAGCTACGAAATTTGTAATTCAAATCCTGCAGTCTTTGAGCACGGGTGAGGACGTGCACTCAGTTAAGGAGCGTGGAAGGTGCATATGACGTAATAAGAAAGTTGAGACTAGAAGGTTTTTGGGTTACGATTCATGCTTGGAATAACTTCTTAAATCTACTTTTAAAGTTGGGCGAGACTGATAAGTTTTAGAACATGTATAAGGAAATGATTGCCAGTGGTTACAGTGAAAATGTGAATACTTTTAATTTGATTATTTATGCTTTATGCAATGAATGTAAATTACTAGAAGCAATATATGTTGTTTATTTGATGCTGAAGATTGAAATTTGGCCTAATGTCGTTACTTTTAATATGATCATCGATAAAGCAAATAAAATGGGTGAGATGGATCTTGCTCTAAAGCTGACAAGGAACACTGAGGTGATTTCAGGAGGCAGTGTTTCGCCTAATATAGTTGCCTATAATTGTATCATTAATGGATTCTGCAAGATAAGGAGGTTAGAGTCTGCAAAAAATGTTCTTGGTGAAATGATTAAGCTGGGAATATATTTCAATGAGAGAACATATGCCACTTTGATTGACGGATATGCTAGAAAAGGGAGTTTGGATGTGGCATTTAGGTTATGTGATGAAATGGTTGAAATGAGGTTTGATTCCAGACACTTTTGTATATAA ATTGATTGCTATTACCACAATTACGACCCTCCATTTCATTCGCCGCCACTCTACGGCGGAGCTGGCGACGGTATCTGCACTTTTACACATTTGCGCGGGAAAACCGATGGCTGTGAGTGCTTCAGTGGCGACTTCCAACCTCATTCTGATGATAACCAACTAGCTTCATTCGCAGTGCGCAGCTTCTCTCTTGTTGCCGTCGAGTTCCGACTGCGCGAGAGCAATCAACTTCCAGTGTTGGGAGCAGATAGAAACTGCGAAAGTTTCGTGTTCTTTGATTCCCATATCCTCTGCGCTCTCTTTGGCGAAGCTTGGGAGATATTAGGCCTCCTTTTTCTGTGGGGAAGTTCTGTTTTCAGACGAGGTTTTCATACGGGTAAGAAGCTTTTAAGTCCAAGCACCGAGGATATCATTTGTAAAGCAATTTGTGTTAATTTAAAACAGAGAAGATGGAAGTTCTTAGAGCAAGTATCACCAAGTCTCACGAATTCGTTGGTCTGTCGTGTTGTTCGCGAGTTTCGCAACTCTCCACAGTTAGCTTTAGAATTCTACAACTGGGTTGAGGCAAGAGACAACTTTTCCCACTCATTAGAATCACGTTGTACCTTGGTTCACGTTTTAGTCAATTCCAGAAACTTTAATGATGCCTTGTCTATCATGGAGAGTTTAATACTTAAAATGATTGAAATTTGGCCTAATGTCGTTACTTTTAATATGATCATCGATAAAGCAAATAAAATGGGTGAGATGGATCTTGCTCTAAAGCTGACAAGGAACACTGAGGTGATTTCAGGAGGCAGTGTTTCGCCTAATATAGTTGCCTATAATTGTATCATTAATGGATTCTGCAAGATAAGGAGGTTAGAGTCTGCAAAAAATGTTCTTGGTGAAATGATTAAGCTGGGAATATATTTCAATGAGAGAACATATGCCACTTTGATTGACGGATATGCTAGAAAAGGGAGTTTGGATGTGGCATTTAGGTTATGTGATGAAATGGTTGAAATGAGGTTTGATTCCAGACACTTTTGTATATAA ATTGATTGCTATTACCACAATTACGACCCTCCATTTCATTCGCCGCCACTCTACGGCGGAGCTGGCGACGGTATCTGCACTTTTACACATTTGCGCGGGAAAACCGATGGCTGTGAGTGCTTCAGTGGCGACTTCCAACCTCATTCTGATGATAACCAACTAGCTTCATTCGCAGTGCGCAGCTTCTCTCTTGTTGCCGTCGAGTTCCGACTGCGCGAGAGCAATCAACTTCCAGTGTTGGGAGCAGATAGAAACTGCGAAAGTTTCGTGTTCTTTGATTCCCATATCCTCTGCGCTCTCTTTGGCGAAGCTTGGGAGATATTAGGCCTCCTTTTTCTGTGGGGAAGTTCTGTTTTCAGACGAGGTTTTCATACGGGTAAGAAGCTTTTAAGTCCAAGCACCGAGGATATCATTTGTAAAGCAATTTGTGTTAATTTAAAACAGAGAAGATGGAAGTTCTTAGAGCAAGTATCACCAAGTCTCACGAATTCGTTGGTCTGTCGTGTTGTTCGCGAGTTTCGCAACTCTCCACAGTTAGCTTTAGAATTCTACAACTGGGTTGAGGCAAGAGACAACTTTTCCCACTCATTAGAATCACGTTGTACCTTGGTTCACGTTTTAGTCAATTCCAGAAACTTTAATGATGCCTTGTCTATCATGGAGAGTTTAATACTTAAAATGATTGAAATTTGGCCTAATGTCGTTACTTTTAATATGATCATCGATAAAGCAAATAAAATGGGTGAGATGGATCTTGCTCTAAAGCTGACAAGGAACACTGAGGTGATTTCAGGAGGCAGTGTTTCGCCTAATATAGTTGCCTATAATTGTATCATTAATGGATTCTGCAAGATAAGGAGGTTAGAGTCTGCAAAAAATGTTCTTGGTGAAATGATTAAGCTGGGAATATATTTCAATGAGAGAACATATGCCACTTTGATTGACGGATATGCTAGAAAAGGGAGTTTGGATGTGGCATTTAGGTTATGTGATGAAATGGTTGAAATGAGGTTTGATTCCAGACACTTTTGTATATAA IDCYYHNYDPPFHSPPLYGGAGDGICTFTHLRGKTDGCECFSGDFQPHSDDNQLASFAVRSFSLVAVEFRLRESNQLPVLGADRNCESFVFFDSHILCALFGEAWEILGLLFLWGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILKMIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRFDSRHFCI
BLAST of CsGy1G010590 vs. NCBI nr
Match: ADN34051.1 (pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo]) HSP 1 Score: 310.1 bits (793), Expect = 9.6e-81 Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0
BLAST of CsGy1G010590 vs. NCBI nr
Match: XP_008441068.2 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucumis melo]) HSP 1 Score: 310.1 bits (793), Expect = 9.6e-81 Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0
BLAST of CsGy1G010590 vs. NCBI nr
Match: XP_022923680.1 (pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita moschata]) HSP 1 Score: 281.6 bits (719), Expect = 3.7e-72 Identity = 166/317 (52.37%), Postives = 175/317 (55.21%), Query Frame = 0
BLAST of CsGy1G010590 vs. NCBI nr
Match: XP_023519211.1 (pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71 Identity = 165/317 (52.05%), Postives = 174/317 (54.89%), Query Frame = 0
BLAST of CsGy1G010590 vs. NCBI nr
Match: XP_023001240.1 (pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Cucurbita maxima]) HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70 Identity = 162/317 (51.10%), Postives = 171/317 (53.94%), Query Frame = 0
BLAST of CsGy1G010590 vs. TAIR10
Match: AT1G11710.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 122.1 bits (305), Expect = 6.8e-28 Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of CsGy1G010590 vs. TAIR10
Match: AT5G66631.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 58.5 bits (140), Expect = 9.2e-09 Identity = 51/198 (25.76%), Postives = 96/198 (48.48%), Query Frame = 0
BLAST of CsGy1G010590 vs. TAIR10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 3.5e-08 Identity = 49/208 (23.56%), Postives = 94/208 (45.19%), Query Frame = 0
BLAST of CsGy1G010590 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 55.8 bits (133), Expect = 5.9e-08 Identity = 48/227 (21.15%), Postives = 100/227 (44.05%), Query Frame = 0
BLAST of CsGy1G010590 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07 Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of CsGy1G010590 vs. Swiss-Prot
Match: sp|Q9SAA6|PPR34_ARATH (Pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11710 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.2e-26 Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of CsGy1G010590 vs. Swiss-Prot
Match: sp|Q0WP85|PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 9.7e-08 Identity = 56/248 (22.58%), Postives = 105/248 (42.34%), Query Frame = 0
BLAST of CsGy1G010590 vs. Swiss-Prot
Match: sp|B3H4P1|PP450_ARATH (Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana OX=3702 GN=At5g66631 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.7e-07 Identity = 51/198 (25.76%), Postives = 96/198 (48.48%), Query Frame = 0
BLAST of CsGy1G010590 vs. Swiss-Prot
Match: sp|Q9FIT7|PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.3e-07 Identity = 49/208 (23.56%), Postives = 94/208 (45.19%), Query Frame = 0
BLAST of CsGy1G010590 vs. Swiss-Prot
Match: sp|Q9ZVX5|PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06 Identity = 48/227 (21.15%), Postives = 100/227 (44.05%), Query Frame = 0
BLAST of CsGy1G010590 vs. TrEMBL
Match: tr|A0A1S3B385|A0A1S3B385_CUCME (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485289 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.4e-81 Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0
BLAST of CsGy1G010590 vs. TrEMBL
Match: tr|E5GC52|E5GC52_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.4e-81 Identity = 181/317 (57.10%), Postives = 185/317 (58.36%), Query Frame = 0
BLAST of CsGy1G010590 vs. TrEMBL
Match: tr|A0A0A0LRK7|A0A0A0LRK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062950 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 4.0e-59 Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CsGy1G010590 vs. TrEMBL
Match: tr|A0A0A0LU83|A0A0A0LU83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062940 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 1.0e-41 Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of CsGy1G010590 vs. TrEMBL
Match: tr|A0A061GNP0|A0A061GNP0_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_030228 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38 Identity = 103/293 (35.15%), Postives = 155/293 (52.90%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |