CsGy1G009610.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G009610.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	TITAN-like protein isoform X2
Location	Chr1 : 5973056 .. 5974832 (+)
Sequence length	987

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAACAGAAGTTCATTTCTACTGTGAGTCATGACTGTCTATTAATTTGAATCAATGTTTGTCGATGACAGTGGGAGAAGAAGTGCAAAGTACAAAGTGTATCTGCTTCATCCAGTCTTGGACCTGCAAATGATATCCACAATCAAGTCCAATATGAAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCATCAATAAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGGTCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACATGATACCACTGTTTCTTTGCATGATGGTTCATGTTCTGGTGCACATCTATGGAGCTCAAAGAATTTAACACGTAAGCTGTCCCTGTATCTTTCACCTTTTGTCTTTGATTTCTTGTCAGTCGTTGAAGTTCTGAAATAGTGTACAAATGTGTAACACACTCTGTGATTCAGTTAGCGAGGTCAACAAGCATTATCAACTGGATATTGGTAGAACATGCACTGCTAATGGTCAATCCAGTGGTCAGGGGGTAAGTTTGGTTATTCTCTTCTACTGGAGAAATGGAGTTCTGTATTTACTATGAAGTTGCGCTGTTTTAGTACTAGAAGGCCTTCCTTTTTTTTTGGTAAGGAGGCGGTGGGCTTTCTCTAACTGAAGAGTGTGTGTGGGCATTACTACTACTACTACTACTACTATTATTATTTTAAGTTTCTCTCCTCAGTTCTTTATCTTGTCAATTTCACGTGTCAATAAATATTTATAGAAGCCTGCAGGTTTCATTGAATGGGGTGGCATGACATCCTGTTATTGTAATAAATGTAGCTCTGACAATCAACTCTTTGTTGCTAGATAACATCTTCATACTCCAGTTGAAATTATATCTTGTCTTTCTTCACGAGCATGTTACTTTTTCATAATGTATAAGTTTTTTATTGACATTTCTAGTAAATGCATAACCTACTTGATATAGATGTACGGGATGCATCAGAATGAAAGAACTGCGAACACAGAAAGCCATCCGGAGGGTATGGAATTTTATGAAATCATATTCTCATTTTTATGTTACTCAACTCATTCACACAGTCTTGATATTTATTAATAATTCTAAAAGGGAAAATTAGATACTATCAGAATTATGCTCATTTGATACTGTGAATATATCTTCGTTTAAATTCTGAACTGTATAGTGGTGATGTGTTTTCCATCTATTTGCTATATCTCTTCAGGTTTTCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGGAAATATTAATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGATTTAATGTTCAAATAAGACCAATGGTTGGAGGTGGTGTTTCTTCTTTGAAGGAATCTGCAAAGTCCAATAAACTGAACCCCAAACGGGTAGGGGCTGCATGGGCAGAAAAAAGAAAGAGGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGAAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTTGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTGAGCCCCATTTTCATCACATCTAATTCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAA

mRNA sequence

ATGAGAAAACAGAAGTTCATTTCTACTTGGGAGAAGAAGTGCAAAGTACAAAGTGTATCTGCTTCATCCAGTCTTGGACCTGCAAATGATATCCACAATCAAGTCCAATATGAAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCATCAATAAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGGTCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACATGATACCACTGTTTCTTTGCATGATGGTTCATGTTCTGGTGCACATCTATGGAGCTCAAAGAATTTAACACTTAGCGAGGTCAACAAGCATTATCAACTGGATATTGGTAGAACATGCACTGCTAATGGTCAATCCAGTGGTCAGGGGATGTACGGGATGCATCAGAATGAAAGAACTGCGAACACAGAAAGCCATCCGGAGGGTTTTCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGGAAATATTAATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGATTTAATGTTCAAATAAGACCAATGGTTGGAGGTGGTGTTTCTTCTTTGAAGGAATCTGCAAAGTCCAATAAACTGAACCCCAAACGGGTAGGGGCTGCATGGGCAGAAAAAAGAAAGAGGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGAAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTTGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTGAGCCCCATTTTCATCACATCTAATTCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAA

Coding sequence (CDS)

ATGAGAAAACAGAAGTTCATTTCTACTTGGGAGAAGAAGTGCAAAGTACAAAGTGTATCTGCTTCATCCAGTCTTGGACCTGCAAATGATATCCACAATCAAGTCCAATATGAAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCATCAATAAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGGTCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACATGATACCACTGTTTCTTTGCATGATGGTTCATGTTCTGGTGCACATCTATGGAGCTCAAAGAATTTAACACTTAGCGAGGTCAACAAGCATTATCAACTGGATATTGGTAGAACATGCACTGCTAATGGTCAATCCAGTGGTCAGGGGATGTACGGGATGCATCAGAATGAAAGAACTGCGAACACAGAAAGCCATCCGGAGGGTTTTCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGGAAATATTAATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGATTTAATGTTCAAATAAGACCAATGGTTGGAGGTGGTGTTTCTTCTTTGAAGGAATCTGCAAAGTCCAATAAACTGAACCCCAAACGGGTAGGGGCTGCATGGGCAGAAAAAAGAAAGAGGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGAAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTTGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTGAGCCCCATTTTCATCACATCTAATTCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAA

Protein sequence

MRKQKFISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYTNEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIGRTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRMVSPIFITSNSVLMFQFISTIMKHLLFYC

Homology

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BLAST of CsGy1G009610.1 vs. NCBI nr
Match: XP_011652145.1 (PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652149.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652153.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652157.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652160.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652164.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >KGN64412.1 hypothetical protein Csa_1G050510 [Cucumis sativus])

HSP 1 Score: 580.5 bits (1495), Expect = 3.6e-162
Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 132 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 191

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG
Sbjct: 192 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 251

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL
Sbjct: 252 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 311

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS
Sbjct: 312 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 371

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 372 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 425

[Close]

BLAST of CsGy1G009610.1 vs. NCBI nr
Match: XP_011652166.1 (PREDICTED: TITAN-like protein isoform X2 [Cucumis sativus])

HSP 1 Score: 580.5 bits (1495), Expect = 3.6e-162
Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 131 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 190

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG
Sbjct: 191 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 250

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL
Sbjct: 251 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 310

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS
Sbjct: 311 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 370

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 371 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 424

[Close]

BLAST of CsGy1G009610.1 vs. NCBI nr
Match: XP_011652172.1 (PREDICTED: TITAN-like protein isoform X3 [Cucumis sativus])

HSP 1 Score: 580.5 bits (1495), Expect = 3.6e-162
Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 132 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 191

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG
Sbjct: 192 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 251

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL
Sbjct: 252 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 311

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS
Sbjct: 312 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 371

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 372 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 425

[Close]

BLAST of CsGy1G009610.1 vs. NCBI nr
Match: XP_008439729.1 (PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439739.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439747.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439753.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis melo])

HSP 1 Score: 550.4 bits (1417), Expect = 4.0e-153
Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 129 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 188

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCS AHLWSSKNLTLSEVNKHYQLD G
Sbjct: 189 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSDAHLWSSKNLTLSEVNKHYQLDSG 248

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYG HQNE TAN ESHPEGFQTLTRIS+IV+GDSGGN++SGMLPPWL
Sbjct: 249 RTCTANGQSSGQGMYGTHQNETTANKESHPEGFQTLTRISSIVTGDSGGNVHSGMLPPWL 308

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMV GGV SLKESAKS KLNPKRVGAAWAEKRK ELEMEKRGEIVQS
Sbjct: 309 EKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQS 368

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           Y DKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 369 YDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 422

[Close]

BLAST of CsGy1G009610.1 vs. NCBI nr
Match: XP_008439800.1 (PREDICTED: TITAN-like protein isoform X2 [Cucumis melo])

HSP 1 Score: 550.4 bits (1417), Expect = 4.0e-153
Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 128 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 187

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCS AHLWSSKNLTLSEVNKHYQLD G
Sbjct: 188 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSDAHLWSSKNLTLSEVNKHYQLDSG 247

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYG HQNE TAN ESHPEGFQTLTRIS+IV+GDSGGN++SGMLPPWL
Sbjct: 248 RTCTANGQSSGQGMYGTHQNETTANKESHPEGFQTLTRISSIVTGDSGGNVHSGMLPPWL 307

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMV GGV SLKESAKS KLNPKRVGAAWAEKRK ELEMEKRGEIVQS
Sbjct: 308 EKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQS 367

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           Y DKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 368 YDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 421

[Close]

BLAST of CsGy1G009610.1 vs. TAIR10
Match: AT4G24900.1 (unknown protein)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-42
Identity = 119/302 (39.40%), Postives = 164/302 (54.30%), Query Frame = 0


Query: 7   ISTWEKKCKV---QSVSASSSL----GPANDIHNQVQYENFDNFGNNNIHSVESSSSISV 66
           ++ WEKKC+    +  S   S     G +NDIH ++ +E  D       H + S  S  V
Sbjct: 128 VAKWEKKCQSFGNEDASFEGSCGQLSGTSNDIHTKLAFETMDRIKKVPAHHINSYKSNDV 187

Query: 67  LPLHSYTNEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNK 126
           +PL   TNEYQ+S S   G     + ++   D+   L D S +G               +
Sbjct: 188 MPLQYNTNEYQISLSEIPGVIHNGSYLNM-DDSQFPLCDESGNG-------------FGE 247

Query: 127 HYQLDIGRTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINS 186
           H      +  + NG    Q  Y + Q+++  +   +P G   +T IS+  S D+GGN++S
Sbjct: 248 HSIPCRSKDYSGNGNYCTQENYQVSQDKKQIDGSYNPPGVVGMTSISSSHSTDAGGNVHS 307

Query: 187 GMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEK 246
           G  PPWL+  +    +VQ+         + K   K+ KLNP RVGAAWAE+RK E+EMEK
Sbjct: 308 GAPPPWLDANDGDFSSVQLNQSDVARFQA-KVPGKNRKLNPNRVGAAWAERRKIEIEMEK 367

Query: 247 RGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVEN-SPETN-VNIQPYIS 300
            G + +S  D +WLPNFGRVWQSG+RKESRKEFEKEK KL+  E+ S E+  V IQPYIS
Sbjct: 368 SGHVTKSNIDPDWLPNFGRVWQSGTRKESRKEFEKEKRKLVKTESISTESEPVKIQPYIS 414

[Close]

BLAST of CsGy1G009610.1 vs. Swiss-Prot
Match: sp|F4JRR5|TTL_ARATH (TITAN-like protein OS=Arabidopsis thaliana OX=3702 GN=TTL PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41
Identity = 119/302 (39.40%), Postives = 164/302 (54.30%), Query Frame = 0


Query: 7   ISTWEKKCKV---QSVSASSSL----GPANDIHNQVQYENFDNFGNNNIHSVESSSSISV 66
           ++ WEKKC+    +  S   S     G +NDIH ++ +E  D       H + S  S  V
Sbjct: 128 VAKWEKKCQSFGNEDASFEGSCGQLSGTSNDIHTKLAFETMDRIKKVPAHHINSYKSNDV 187

Query: 67  LPLHSYTNEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNK 126
           +PL   TNEYQ+S S   G     + ++   D+   L D S +G               +
Sbjct: 188 MPLQYNTNEYQISLSEIPGVIHNGSYLNM-DDSQFPLCDESGNG-------------FGE 247

Query: 127 HYQLDIGRTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINS 186
           H      +  + NG    Q  Y + Q+++  +   +P G   +T IS+  S D+GGN++S
Sbjct: 248 HSIPCRSKDYSGNGNYCTQENYQVSQDKKQIDGSYNPPGVVGMTSISSSHSTDAGGNVHS 307

Query: 187 GMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEK 246
           G  PPWL+  +    +VQ+         + K   K+ KLNP RVGAAWAE+RK E+EMEK
Sbjct: 308 GAPPPWLDANDGDFSSVQLNQSDVARFQA-KVPGKNRKLNPNRVGAAWAERRKIEIEMEK 367

Query: 247 RGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVEN-SPETN-VNIQPYIS 300
            G + +S  D +WLPNFGRVWQSG+RKESRKEFEKEK KL+  E+ S E+  V IQPYIS
Sbjct: 368 SGHVTKSNIDPDWLPNFGRVWQSGTRKESRKEFEKEKRKLVKTESISTESEPVKIQPYIS 414

[Close]

BLAST of CsGy1G009610.1 vs. Swiss-Prot
Match: sp|Q4VA36|CCD84_MOUSE (Coiled-coil domain-containing protein 84 OS=Mus musculus OX=10090 GN=Ccdc84 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.9e-06
Identity = 37/102 (36.27%), Postives = 50/102 (49.02%), Query Frame = 0


Query: 175 GNINSGMLPPW-LEKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKR 234
           GNI+SG  PPW +++ E S  ++ I P     +   KE  K  KL P RVGA +      
Sbjct: 234 GNIHSGATPPWMIQEEEHSSGSLPIGPSYEEFLKE-KEKQKLKKLPPDRVGANFDH---- 293

Query: 235 ELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKE 276
                       S     WLP+FGRVW +G R +SR +F+ E
Sbjct: 294 -----------SSNTSAGWLPSFGRVWNNGRRWQSRHQFKTE 319

[Close]

BLAST of CsGy1G009610.1 vs. Swiss-Prot
Match: sp|Q86UT8|CCD84_HUMAN (Coiled-coil domain-containing protein 84 OS=Homo sapiens OX=9606 GN=CCDC84 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-06
Identity = 37/106 (34.91%), Postives = 51/106 (48.11%), Query Frame = 0


Query: 175 GNINSGMLPPWLEKPED-SGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKR 234
           GNI+SG  PPW+ + E+    N +I P     +   KE  K  KL P RVGA +      
Sbjct: 234 GNIHSGATPPWMIQDEEYIAGNQEIGPSYEEFLKE-KEKQKLKKLPPDRVGANFDH---- 293

Query: 235 ELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKL 280
                       S     WLP+FGRVW +G R +SR +F+ E + +
Sbjct: 294 -----------SSRTSAGWLPSFGRVWNNGRRWQSRHQFKTEAAAM 323

[Close]

BLAST of CsGy1G009610.1 vs. TrEMBL
Match: tr|A0A0A0LUE2|A0A0A0LUE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050510 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 2.4e-162
Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 132 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 191

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG
Sbjct: 192 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 251

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL
Sbjct: 252 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 311

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS
Sbjct: 312 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 371

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 372 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 425

[Close]

BLAST of CsGy1G009610.1 vs. TrEMBL
Match: tr|A0A1S3AZI0|A0A1S3AZI0_CUCME (TITAN-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 2.7e-153
Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 129 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 188

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCS AHLWSSKNLTLSEVNKHYQLD G
Sbjct: 189 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSDAHLWSSKNLTLSEVNKHYQLDSG 248

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYG HQNE TAN ESHPEGFQTLTRIS+IV+GDSGGN++SGMLPPWL
Sbjct: 249 RTCTANGQSSGQGMYGTHQNETTANKESHPEGFQTLTRISSIVTGDSGGNVHSGMLPPWL 308

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMV GGV SLKESAKS KLNPKRVGAAWAEKRK ELEMEKRGEIVQS
Sbjct: 309 EKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQS 368

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           Y DKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 369 YDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 422

[Close]

BLAST of CsGy1G009610.1 vs. TrEMBL
Match: tr|A0A1S4DUN7|A0A1S4DUN7_CUCME (TITAN-like protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 2.7e-153
Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 129 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 188

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCS AHLWSSKNLTLSEVNKHYQLD G
Sbjct: 189 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSDAHLWSSKNLTLSEVNKHYQLDSG 248

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYG HQNE TAN ESHPEGFQTLTRIS+IV+GDSGGN++SGMLPPWL
Sbjct: 249 RTCTANGQSSGQGMYGTHQNETTANKESHPEGFQTLTRISSIVTGDSGGNVHSGMLPPWL 308

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMV GGV SLKESAKS KLNPKRVGAAWAEKRK ELEMEKRGEIVQS
Sbjct: 309 EKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQS 368

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           Y DKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 369 YDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 422

[Close]

BLAST of CsGy1G009610.1 vs. TrEMBL
Match: tr|A0A1S3AZM1|A0A1S3AZM1_CUCME (TITAN-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 2.7e-153
Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 7   ISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 66
           ++ WEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT
Sbjct: 128 VAKWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYT 187

Query: 67  NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIG 126
           NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCS AHLWSSKNLTLSEVNKHYQLD G
Sbjct: 188 NEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSDAHLWSSKNLTLSEVNKHYQLDSG 247

Query: 127 RTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWL 186
           RTCTANGQSSGQGMYG HQNE TAN ESHPEGFQTLTRIS+IV+GDSGGN++SGMLPPWL
Sbjct: 248 RTCTANGQSSGQGMYGTHQNETTANKESHPEGFQTLTRISSIVTGDSGGNVHSGMLPPWL 307

Query: 187 EKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQS 246
           EKPEDSGFNVQIRPMV GGV SLKESAKS KLNPKRVGAAWAEKRK ELEMEKRGEIVQS
Sbjct: 308 EKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQS 367

Query: 247 YGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 301
           Y DKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM
Sbjct: 368 YDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRM 421

[Close]

BLAST of CsGy1G009610.1 vs. TrEMBL
Match: tr|A0A251P8T4|A0A251P8T4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G150700 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67
Identity = 154/303 (50.83%), Postives = 196/303 (64.69%), Query Frame = 0


Query: 7   ISTWEKKCK--------VQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSIS 66
           ++ WEKKCK            S   + GP+NDIHN+++Y   D F NN+     SS S  
Sbjct: 130 LAMWEKKCKSLKNEAVPCGEKSRGPTFGPSNDIHNELKYGIIDTFENNS----NSSFSNG 189

Query: 67  VLPLHSYTNEYQVSNSSYSGSSDVSNLVSFPHD-TTVSLHDGSCSGAHLWSSKNLTLSEV 126
           V+PL  +TNE+QV   S+SG   V+N+  FP D  T SLH  +CSG +  +SK LT+S  
Sbjct: 190 VMPLLFHTNEHQV---SHSGPPQVTNVGCFPQDVATSSLHGETCSGIYSINSKGLTVSSS 249

Query: 127 NKHYQLDIGRTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNI 186
            +H  +  GR C+A+G  S + M  ++Q+ER     S   GFQ LT+IS+  S ++ GN+
Sbjct: 250 TQHSFISNGRKCSADGYFSNERMSEVYQHERMTKGLSSSPGFQNLTQISSTCSKEASGNV 309

Query: 187 NSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEM 246
           +SG  PPWLE  E+  F V  +P  G  +S   +S KS KLNPKRVGAAWAE+RKRE+EM
Sbjct: 310 HSGAPPPWLEADEEIQFTVPPKPASGTRISLSNKSRKSKKLNPKRVGAAWAERRKREMEM 369

Query: 247 EKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYIS 301
           EKRGEIV+S  D NWLPNFGRVWQSGSRKESRKEFE EK KL  VE+  E  + IQPY+S
Sbjct: 370 EKRGEIVKSDCDANWLPNFGRVWQSGSRKESRKEFELEKQKLPKVESEFEMPIKIQPYVS 425

The following BLAST results are available for this feature:

BLAST of CsGy1G009610.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652145.1	3.6e-162	98.98	PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652149.1 PREDI...	[more]
XP_011652166.1	3.6e-162	98.98	PREDICTED: TITAN-like protein isoform X2 [Cucumis sativus]	[more]
XP_011652172.1	3.6e-162	98.98	PREDICTED: TITAN-like protein isoform X3 [Cucumis sativus]	[more]
XP_008439729.1	4.0e-153	94.22	PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439739.1 PREDICTE...	[more]
XP_008439800.1	4.0e-153	94.22	PREDICTED: TITAN-like protein isoform X2 [Cucumis melo]	[more]

BLAST of CsGy1G009610.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24900.1	1.2e-42	39.40	unknown protein	[more]

BLAST of CsGy1G009610.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JRR5\|TTL_ARATH	2.2e-41	39.40	TITAN-like protein OS=Arabidopsis thaliana OX=3702 GN=TTL PE=2 SV=1	[more]
sp\|Q4VA36\|CCD84_MOUSE	3.9e-06	36.27	Coiled-coil domain-containing protein 84 OS=Mus musculus OX=10090 GN=Ccdc84 PE=2...	[more]
sp\|Q86UT8\|CCD84_HUMAN	8.6e-06	34.91	Coiled-coil domain-containing protein 84 OS=Homo sapiens OX=9606 GN=CCDC84 PE=1 ...	[more]

BLAST of CsGy1G009610.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUE2\|A0A0A0LUE2_CUCSA	2.4e-162	98.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050510 PE=4 SV=1	[more]
tr\|A0A1S3AZI0\|A0A1S3AZI0_CUCME	2.7e-153	94.22	TITAN-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1	[more]
tr\|A0A1S4DUN7\|A0A1S4DUN7_CUCME	2.7e-153	94.22	TITAN-like protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1	[more]
tr\|A0A1S3AZM1\|A0A1S3AZM1_CUCME	2.7e-153	94.22	TITAN-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1	[more]
tr\|A0A251P8T4\|A0A251P8T4_PRUPE	2.9e-67	50.83	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G150700 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR028015	CCDC84

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G009610	CsGy1G009610	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G009610.1	CsGy1G009610.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G009610.1.exon.1	CsGy1G009610.1.exon.1	exon
CsGy1G009610.1.exon.2	CsGy1G009610.1.exon.2	exon
CsGy1G009610.1.exon.3	CsGy1G009610.1.exon.3	exon
CsGy1G009610.1.exon.4	CsGy1G009610.1.exon.4	exon
CsGy1G009610.1.exon.5	CsGy1G009610.1.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G009610.1.CDS.1	CsGy1G009610.1.CDS.1	CDS
CsGy1G009610.1.CDS.2	CsGy1G009610.1.CDS.2	CDS
CsGy1G009610.1.CDS.3	CsGy1G009610.1.CDS.3	CDS
CsGy1G009610.1.CDS.4	CsGy1G009610.1.CDS.4	CDS
CsGy1G009610.1.CDS.5	CsGy1G009610.1.CDS.5	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028015	Coiled-coil domain-containing protein 84	PFAM	PF14968	CCDC84	coord: 7..278 e-value: 8.1E-52 score: 176.9
IPR028015	Coiled-coil domain-containing protein 84	PANTHER	PTHR31198	FAMILY NOT NAMED	coord: 10..301