CsGy1G009610 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAACAGAAGTTCATTTCTACTGTGAGTCATGACTGTCTATTAATTTGAATCAATGTTTGTCGATGACAGTGGGAGAAGAAGTGCAAAGTACAAAGTGTATCTGCTTCATCCAGTCTTGGACCTGCAAATGATATCCACAATCAAGTCCAATATGAAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCATCAATAAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGGTCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACATGATACCACTGTTTCTTTGCATGATGGTTCATGTTCTGGTGCACATCTATGGAGCTCAAAGAATTTAACACGTAAGCTGTCCCTGTATCTTTCACCTTTTGTCTTTGATTTCTTGTCAGTCGTTGAAGTTCTGAAATAGTGTACAAATGTGTAACACACTCTGTGATTCAGTTAGCGAGGTCAACAAGCATTATCAACTGGATATTGGTAGAACATGCACTGCTAATGGTCAATCCAGTGGTCAGGGGGTAAGTTTGGTTATTCTCTTCTACTGGAGAAATGGAGTTCTGTATTTACTATGAAGTTGCGCTGTTTTAGTACTAGAAGGCCTTCCTTTTTTTTTGGTAAGGAGGCGGTGGGCTTTCTCTAACTGAAGAGTGTGTGTGGGCATTACTACTACTACTACTACTACTATTATTATTTTAAGTTTCTCTCCTCAGTTCTTTATCTTGTCAATTTCACGTGTCAATAAATATTTATAGAAGCCTGCAGGTTTCATTGAATGGGGTGGCATGACATCCTGTTATTGTAATAAATGTAGCTCTGACAATCAACTCTTTGTTGCTAGATAACATCTTCATACTCCAGTTGAAATTATATCTTGTCTTTCTTCACGAGCATGTTACTTTTTCATAATGTATAAGTTTTTTATTGACATTTCTAGTAAATGCATAACCTACTTGATATAGATGTACGGGATGCATCAGAATGAAAGAACTGCGAACACAGAAAGCCATCCGGAGGGTATGGAATTTTATGAAATCATATTCTCATTTTTATGTTACTCAACTCATTCACACAGTCTTGATATTTATTAATAATTCTAAAAGGGAAAATTAGATACTATCAGAATTATGCTCATTTGATACTGTGAATATATCTTCGTTTAAATTCTGAACTGTATAGTGGTGATGTGTTTTCCATCTATTTGCTATATCTCTTCAGGTTTTCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGGAAATATTAATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGATTTAATGTTCAAATAAGACCAATGGTTGGAGGTGGTGTTTCTTCTTTGAAGGAATCTGCAAAGTCCAATAAACTGAACCCCAAACGGGTAGGGGCTGCATGGGCAGAAAAAAGAAAGAGGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGAAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTTGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTGAGCCCCATTTTCATCACATCTAATTCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAA ATGAGAAAACAGAAGTTCATTTCTACTTGGGAGAAGAAGTGCAAAGTACAAAGTGTATCTGCTTCATCCAGTCTTGGACCTGCAAATGATATCCACAATCAAGTCCAATATGAAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCATCAATAAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGGTCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACATGATACCACTGTTTCTTTGCATGATGGTTCATGTTCTGGTGCACATCTATGGAGCTCAAAGAATTTAACACTTAGCGAGGTCAACAAGCATTATCAACTGGATATTGGTAGAACATGCACTGCTAATGGTCAATCCAGTGGTCAGGGGATGTACGGGATGCATCAGAATGAAAGAACTGCGAACACAGAAAGCCATCCGGAGGGTTTTCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGGAAATATTAATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGATTTAATGTTCAAATAAGACCAATGGTTGGAGGTGGTGTTTCTTCTTTGAAGGAATCTGCAAAGTCCAATAAACTGAACCCCAAACGGGTAGGGGCTGCATGGGCAGAAAAAAGAAAGAGGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGAAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTTGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTGAGCCCCATTTTCATCACATCTAATTCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAA ATGAGAAAACAGAAGTTCATTTCTACTTGGGAGAAGAAGTGCAAAGTACAAAGTGTATCTGCTTCATCCAGTCTTGGACCTGCAAATGATATCCACAATCAAGTCCAATATGAAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCATCAATAAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGGTCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACATGATACCACTGTTTCTTTGCATGATGGTTCATGTTCTGGTGCACATCTATGGAGCTCAAAGAATTTAACACTTAGCGAGGTCAACAAGCATTATCAACTGGATATTGGTAGAACATGCACTGCTAATGGTCAATCCAGTGGTCAGGGGATGTACGGGATGCATCAGAATGAAAGAACTGCGAACACAGAAAGCCATCCGGAGGGTTTTCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGGAAATATTAATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGATTTAATGTTCAAATAAGACCAATGGTTGGAGGTGGTGTTTCTTCTTTGAAGGAATCTGCAAAGTCCAATAAACTGAACCCCAAACGGGTAGGGGCTGCATGGGCAGAAAAAAGAAAGAGGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGAAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTTGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTGAGCCCCATTTTCATCACATCTAATTCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAA MRKQKFISTWEKKCKVQSVSASSSLGPANDIHNQVQYENFDNFGNNNIHSVESSSSISVLPLHSYTNEYQVSNSSYSGSSDVSNLVSFPHDTTVSLHDGSCSGAHLWSSKNLTLSEVNKHYQLDIGRTCTANGQSSGQGMYGMHQNERTANTESHPEGFQTLTRISNIVSGDSGGNINSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNKLNPKRVGAAWAEKRKRELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRMVSPIFITSNSVLMFQFISTIMKHLLFYC
BLAST of CsGy1G009610 vs. NCBI nr
Match: XP_011652145.1 (PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652149.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652153.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652157.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652160.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >XP_011652164.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus] >KGN64412.1 hypothetical protein Csa_1G050510 [Cucumis sativus]) HSP 1 Score: 580.5 bits (1495), Expect = 3.6e-162 Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0
BLAST of CsGy1G009610 vs. NCBI nr
Match: XP_011652166.1 (PREDICTED: TITAN-like protein isoform X2 [Cucumis sativus]) HSP 1 Score: 580.5 bits (1495), Expect = 3.6e-162 Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0
BLAST of CsGy1G009610 vs. NCBI nr
Match: XP_011652172.1 (PREDICTED: TITAN-like protein isoform X3 [Cucumis sativus]) HSP 1 Score: 580.5 bits (1495), Expect = 3.6e-162 Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0
BLAST of CsGy1G009610 vs. NCBI nr
Match: XP_008439729.1 (PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439739.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439747.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis melo] >XP_008439753.1 PREDICTED: TITAN-like protein isoform X1 [Cucumis melo]) HSP 1 Score: 550.4 bits (1417), Expect = 4.0e-153 Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CsGy1G009610 vs. NCBI nr
Match: XP_008439800.1 (PREDICTED: TITAN-like protein isoform X2 [Cucumis melo]) HSP 1 Score: 550.4 bits (1417), Expect = 4.0e-153 Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CsGy1G009610 vs. TAIR10
Match: AT4G24900.1 (unknown protein) HSP 1 Score: 171.0 bits (432), Expect = 1.2e-42 Identity = 119/302 (39.40%), Postives = 164/302 (54.30%), Query Frame = 0
BLAST of CsGy1G009610 vs. Swiss-Prot
Match: sp|F4JRR5|TTL_ARATH (TITAN-like protein OS=Arabidopsis thaliana OX=3702 GN=TTL PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41 Identity = 119/302 (39.40%), Postives = 164/302 (54.30%), Query Frame = 0
BLAST of CsGy1G009610 vs. Swiss-Prot
Match: sp|Q4VA36|CCD84_MOUSE (Coiled-coil domain-containing protein 84 OS=Mus musculus OX=10090 GN=Ccdc84 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.9e-06 Identity = 37/102 (36.27%), Postives = 50/102 (49.02%), Query Frame = 0
BLAST of CsGy1G009610 vs. Swiss-Prot
Match: sp|Q86UT8|CCD84_HUMAN (Coiled-coil domain-containing protein 84 OS=Homo sapiens OX=9606 GN=CCDC84 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.6e-06 Identity = 37/106 (34.91%), Postives = 51/106 (48.11%), Query Frame = 0
BLAST of CsGy1G009610 vs. TrEMBL
Match: tr|A0A0A0LUE2|A0A0A0LUE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050510 PE=4 SV=1) HSP 1 Score: 580.5 bits (1495), Expect = 2.4e-162 Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0
BLAST of CsGy1G009610 vs. TrEMBL
Match: tr|A0A1S3AZI0|A0A1S3AZI0_CUCME (TITAN-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 2.7e-153 Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CsGy1G009610 vs. TrEMBL
Match: tr|A0A1S4DUN7|A0A1S4DUN7_CUCME (TITAN-like protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 2.7e-153 Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CsGy1G009610 vs. TrEMBL
Match: tr|A0A1S3AZM1|A0A1S3AZM1_CUCME (TITAN-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 2.7e-153 Identity = 277/294 (94.22%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CsGy1G009610 vs. TrEMBL
Match: tr|A0A251P8T4|A0A251P8T4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G150700 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67 Identity = 154/303 (50.83%), Postives = 196/303 (64.69%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |