Cp4.1LG19g03510.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GTACCTTCAATTTCTTCTTTTTCTCCTCCCACATCCGAAGATGACCTCGTCGACCTCACGAGCCTTCTCGGCAACGACACCTCATCGCTCTTCCGCCTCCTCTCTCAAGACACCGGCGACGATCGAGCCATTAATCTCCTTGTTCCTGACCTGACCTACTTCCAACCAACAATAGAGGATATTAAGAACGCCCTCTTGACGACCCCCATATCAAAAGATTTGCAGTTTAGTGCCCACATTTTTTCACGCTTATATTCGTAGTCACGATTTCTTTTTATATTCTAATATTCTATTTTTAATTTTTTTAATTTTGTGAATAAAAATAGGAGCTAGTACAGGTGCTCGAACCCAAGATCTGGTGCAAAGAAGCAAGTGGAAAGGTCCATTGAAGATCCAGAAACTTTCATCATCACCTACGAAGGCCTCCACCTCCACTTTGCTTACCCATTCTTTCTAATGGGCCAAACCCAACAGGCCCAATCTTCAACCAAGAAGCCCAAGACGATTGACCCAGAGCCCAAAGCCCAAAGCCCAAAGCCCAAAGAAGCCCAGATTTCCTCACTCCCGAAGCAACTGGCCCACAAGGGTTGCTCGAGGATATGGTCCCATGGA GTACCTTCAATTTCTTCTTTTTCTCCTCCCACATCCGAAGATGACCTCGTCGACCTCACGAGCCTTCTCGGCAACGACACCTCATCGCTCTTCCGCCTCCTCTCTCAAGACACCGGCGACGATCGAGCCATTAATCTCCTTGTTCCTGACCTGACCTACTTCCAACCAACAATAGAGGATATTAAGAACGCCCTCTTGACGACCCCCATATCAAAAGATTTGCAGTTTAGTGCCCACATTTTTTCACGCTTATATTCGTGCTCGAACCCAAGATCTGGTGCAAAGAAGCAAGTGGAAAGGTCCATTGAAGATCCAGAAACTTTCATCATCACCTACGAAGGCCTCCACCTCCACTTTGCTTACCCATTCTTTCTAATGGGCCAAACCCAACAGGCCCAATCTTCAACCAAGAAGCCCAAGACGATTGACCCAGAGCCCAAAGCCCAAAGCCCAAAGCCCAAAGAAGCCCAGATTTCCTCACTCCCGAAGCAACTGGCCCACAAGGGTTGCTCGAGGATATGGTCCCATGGA GTACCTTCAATTTCTTCTTTTTCTCCTCCCACATCCGAAGATGACCTCGTCGACCTCACGAGCCTTCTCGGCAACGACACCTCATCGCTCTTCCGCCTCCTCTCTCAAGACACCGGCGACGATCGAGCCATTAATCTCCTTGTTCCTGACCTGACCTACTTCCAACCAACAATAGAGGATATTAAGAACGCCCTCTTGACGACCCCCATATCAAAAGATTTGCAGTTTAGTGCCCACATTTTTTCACGCTTATATTCGTGCTCGAACCCAAGATCTGGTGCAAAGAAGCAAGTGGAAAGGTCCATTGAAGATCCAGAAACTTTCATCATCACCTACGAAGGCCTCCACCTCCACTTTGCTTACCCATTCTTTCTAATGGGCCAAACCCAACAGGCCCAATCTTCAACCAAGAAGCCCAAGACGATTGACCCAGAGCCCAAAGCCCAAAGCCCAAAGCCCAAAGAAGCCCAGATTTCCTCACTCCCGAAGCAACTGGCCCACAAGGGTTGCTCGAGGATATGGTCCCATGGA VPSISSFSPPTSEDDLVDLTSLLGNDTSSLFRLLSQDTGDDRAINLLVPDLTYFQPTIEDIKNALLTTPISKDLQFSAHIFSRLYSCSNPRSGAKKQVERSIEDPETFIITYEGLHLHFAYPFFLMGQTQQAQSSTKKPKTIDPEPKAQSPKPKEAQISSLPKQLAHKGCSRIWSHG
BLAST of Cp4.1LG19g03510.1 vs. Swiss-Prot
Match: WRK49_ARATH (Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. TrEMBL
Match: A0A0A0L0Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296160 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.2e-22 Identity = 55/69 (79.71%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. TrEMBL
Match: A0A0B2Q1Y8_GLYSO (Putative WRKY transcription factor 49 OS=Glycine soja GN=glysoja_025015 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 7.6e-16 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. TrEMBL
Match: K7MT52_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G183100 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 7.6e-16 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. TrEMBL
Match: W9RWF0_9ROSA (Putative WRKY transcription factor 49 OS=Morus notabilis GN=L484_009437 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.9e-16 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. TrEMBL
Match: A0A0L9U5C7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g141000 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.7e-15 Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. TAIR10
Match: AT5G43290.1 (AT5G43290.1 WRKY DNA-binding protein 49) HSP 1 Score: 71.2 bits (173), Expect = 7.0e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. NCBI nr
Match: gi|659069085|ref|XP_008448088.1| (PREDICTED: probable WRKY transcription factor 49 [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23 Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. NCBI nr
Match: gi|449448898|ref|XP_004142202.1| (PREDICTED: probable WRKY transcription factor 49 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 4.6e-22 Identity = 55/69 (79.71%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. NCBI nr
Match: gi|1009157820|ref|XP_015896959.1| (PREDICTED: probable WRKY transcription factor 49 [Ziziphus jujuba]) HSP 1 Score: 103.2 bits (256), Expect = 4.7e-19 Identity = 71/153 (46.41%), Postives = 89/153 (58.17%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. NCBI nr
Match: gi|951073149|ref|XP_014492047.1| (PREDICTED: probable WRKY transcription factor 49 [Vigna radiata var. radiata]) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 1
BLAST of Cp4.1LG19g03510.1 vs. NCBI nr
Match: gi|571547050|ref|XP_003551480.2| (PREDICTED: probable WRKY transcription factor 49 [Glycine max]) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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