Cp4.1LG18g07860.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g07860.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transcription factor
Location	Cp4.1LG18 : 7484052 .. 7484771 (+)
Sequence length	720

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

mRNA sequence

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

Coding sequence (CDS)

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

Protein sequence

MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGGQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS

Homology

[Close]

BLAST of Cp4.1LG18g07860.1 vs. Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 71/177 (40.11%), Postives = 87/177 (49.15%), Query Frame = 1


Query: 84  RPSTEQELSSSSSSQ----HQMGGYLLQSSAGSIPASHGGGQVPANFWML-TNTNNQVMG 143
           RP  E   SSSSSSQ    +QMG YL+QS+AGS+P S      P  FW    NT N    
Sbjct: 162 RPKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN---- 221

Query: 144 GDPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGAGGGN 203
              +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG 
Sbjct: 222 ---LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGG 281

Query: 204 HSSSE-GHLNILAGLN-PYRSVSTTG---IMEQQGSGSHSHHGGGGDDRHDSTSHHS 240
               E  H  +LA LN  YR V+ TG     +Q   G H H+         STSHHS
Sbjct: 282 GGGGEHSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHN----HQEDGSTSHHS 325

[Close]

BLAST of Cp4.1LG18g07860.1 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 75/262 (28.63%), Postives = 106/262 (40.46%), Query Frame = 1


Query: 12  YYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLS 71
           +++P+     P  +LFPG  + +   +T+ LNF +           P  ++    S    
Sbjct: 233 FHHPHLQGRAPTSSLFPG--IDNFTPTTSFLNFHN-----------PTKQEGDQDS---- 292

Query: 72  DAAEEISIGRKRRPSTEQELSSSSSS-QH-QMGGYLLQSS-AGSIPASHGGGQVPANF-- 131
              EE++  +KRR  T  +L       QH Q+GGY LQSS +GS   +    Q+P NF  
Sbjct: 293 ---EELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 352

Query: 132 -------------------WMLTNTNNQVMGGDPIWTFPSVNN----------SGLYRGT 191
                               M  +      GG+P+WTFPS+N           SG+  G 
Sbjct: 353 VAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGA 412

Query: 192 MSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQG 240
           +SSGLHFMNF AP+A + GQQ    A   NH  +E   N   G               + 
Sbjct: 413 VSSGLHFMNFAAPMAFLTGQQ--QLATTSNHEINEDSNNNEGG---------------RS 457

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TrEMBL
Match: A0A0A0LRN4_CUCSA (Transcription factor OS=Cucumis sativus GN=Csa_1G009680 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.5e-110
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 63  MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 122

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 123 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 182

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 183 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 242

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHH--GGGG 240
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHH  GGGG
Sbjct: 243 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 302

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TrEMBL
Match: A0A061FY58_THECC (TCP domain-like protein I OS=Theobroma cacao GN=TCM_013943 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76
Identity = 168/251 (66.93%), Postives = 192/251 (76.49%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSS + N NFS+ Q RR+LFPG GL + P   A LNFQS++  NS+ QAK EL
Sbjct: 164 MSVPSQLRSSGF-NSNFSMQQ-RRSLFPGIGLETTP---AFLNFQSSSNLNSMFQAKQEL 223

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN+TS L++S+  EE ++GRKRRP  +       SSQHQMG YLLQSS G+IPASHG  
Sbjct: 224 RDNSTS-LEISET-EEGTLGRKRRPEPDL------SSQHQMGSYLLQSSTGAIPASHG-- 283

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWM+TN+NNQVM GDPIWTFPSVNNS LYRGTMSSGLHFMNFPAP+AL+PGQQ G
Sbjct: 284 QIPANFWMVTNSNNQVMSGDPIWTFPSVNNSALYRGTMSSGLHFMNFPAPMALLPGQQLG 343

Query: 181 S------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG------G 240
           S      G  GG+   SEGHLN+LAGLNPYR VS  G+ E Q SGSHSHHGGG      G
Sbjct: 344 SSGVTSGGGSGGSSGISEGHLNMLAGLNPYRQVSGIGVSESQASGSHSHHGGGGGGGGCG 399

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TrEMBL
Match: A0A067K8C7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11614 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 169/254 (66.54%), Postives = 190/254 (74.80%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRS+S+ NPNFS+ Q RR+LFPG GL + P+ T  LNFQS+N+ N++LQAK EL
Sbjct: 165 MSVPSQLRSASF-NPNFSMQQ-RRSLFPGIGLETSPTPT-FLNFQSSNL-NAVLQAKQEL 224

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RD  TSSL+LS   EE S+GRKRRP  EQ+LSS    QHQMG YLLQSS G+IPA+H   
Sbjct: 225 RD--TSSLELSTETEE-SLGRKRRP--EQDLSSQ---QHQMGSYLLQSSTGAIPATHS-- 284

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWML N NNQVM GDPIWTFPSVNNSGLYR T SSGLHFMNFP PVAL+P QQ G
Sbjct: 285 QIPANFWMLANPNNQVMSGDPIWTFPSVNNSGLYRSTTSSGLHFMNFPTPVALLPSQQLG 344

Query: 181 S-----------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG-- 240
           S           G  GGN   +EGHLN+LAGLNPYR     G+ E Q SGSHSHHGGG  
Sbjct: 345 SSSISGGGGSAGGGSGGNSGITEGHLNMLAGLNPYRH---PGVSESQASGSHSHHGGGGG 401

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TrEMBL
Match: U5FYG4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05430g PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 167/247 (67.61%), Postives = 189/247 (76.52%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MS+PS LRS S+ NPNFSL Q  R+LFPG GL +    T  L+FQS+N  N++LQAK EL
Sbjct: 163 MSIPSHLRSGSF-NPNFSLQQRSRSLFPGIGLETSQPPT-FLSFQSSNNLNAVLQAKQEL 222

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN  SSL+LS   EE S+ RKRR  +EQ+LS S   QHQMG YLLQSSAG+IPASHG  
Sbjct: 223 RDN--SSLELSTETEE-SLSRKRR--SEQDLSPSQ--QHQMGNYLLQSSAGAIPASHG-- 282

Query: 121 QVPANFWMLTNTN-NQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
           Q+PANFWML N+N NQVM GDPIWTFPSVNNS +YRG+MSSGLHFMNFPAPV L+P QQ 
Sbjct: 283 QIPANFWMLANSNNNQVMSGDPIWTFPSVNNSSVYRGSMSSGLHFMNFPAPVTLLPSQQL 342

Query: 181 GS----GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGG---DDRH 240
           GS    GA GGN   SEGHLN+LAGLNPYR    +G+ E Q SGSHSHHGGGG   DDRH
Sbjct: 343 GSTSIGGASGGNSGISEGHLNMLAGLNPYR---PSGLSESQASGSHSHHGGGGGGSDDRH 395

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TrEMBL
Match: U5GE74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04600g PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.9e-72
Identity = 167/248 (67.34%), Postives = 190/248 (76.61%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MS+PSQLRS S+ +PNFSL Q  R+LFPG GL +    T  L+FQS+N  N+++QAK EL
Sbjct: 162 MSIPSQLRSGSF-SPNFSLQQRSRSLFPGIGLETSQPPT-FLSFQSSNNLNAMMQAKQEL 221

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN  SSL+LS   EE S  RKRRP  EQ+LSSS   QHQMG YLLQSS+G++PASHG  
Sbjct: 222 RDN--SSLELSTETEE-SFNRKRRP--EQDLSSSQ--QHQMGSYLLQSSSGAVPASHG-- 281

Query: 121 QVPANFWMLTNTN-NQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
           Q+PANFWML N+N NQVM GDPIWTFPSVNNSGLYR TMSSGLHFMNFPAPV L+P QQ 
Sbjct: 282 QIPANFWMLANSNNNQVMSGDPIWTFPSVNNSGLYRSTMSSGLHFMNFPAPVTLLPSQQL 341

Query: 181 GS----GAGGGNHSSSE-GHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGG---DDR 240
           GS    G+  GN   SE GHLN+LAGLNPYR+   +GI E Q SGSHSHHGGGG   DDR
Sbjct: 342 GSTSIGGSSAGNSGMSELGHLNMLAGLNPYRA---SGISESQASGSHSHHGGGGGGSDDR 395

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-15
Identity = 71/177 (40.11%), Postives = 87/177 (49.15%), Query Frame = 1


Query: 84  RPSTEQELSSSSSSQ----HQMGGYLLQSSAGSIPASHGGGQVPANFWML-TNTNNQVMG 143
           RP  E   SSSSSSQ    +QMG YL+QS+AGS+P S      P  FW    NT N    
Sbjct: 162 RPKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN---- 221

Query: 144 GDPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGAGGGN 203
              +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG 
Sbjct: 222 ---LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGG 281

Query: 204 HSSSE-GHLNILAGLN-PYRSVSTTG---IMEQQGSGSHSHHGGGGDDRHDSTSHHS 240
               E  H  +LA LN  YR V+ TG     +Q   G H H+         STSHHS
Sbjct: 282 GGGGEHSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHN----HQEDGSTSHHS 325

[Close]

BLAST of Cp4.1LG18g07860.1 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 68.2 bits (165), Expect = 8.0e-12
Identity = 75/262 (28.63%), Postives = 106/262 (40.46%), Query Frame = 1


Query: 12  YYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLS 71
           +++P+     P  +LFPG  + +   +T+ LNF +           P  ++    S    
Sbjct: 233 FHHPHLQGRAPTSSLFPG--IDNFTPTTSFLNFHN-----------PTKQEGDQDS---- 292

Query: 72  DAAEEISIGRKRRPSTEQELSSSSSS-QH-QMGGYLLQSS-AGSIPASHGGGQVPANF-- 131
              EE++  +KRR  T  +L       QH Q+GGY LQSS +GS   +    Q+P NF  
Sbjct: 293 ---EELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 352

Query: 132 -------------------WMLTNTNNQVMGGDPIWTFPSVNN----------SGLYRGT 191
                               M  +      GG+P+WTFPS+N           SG+  G 
Sbjct: 353 VAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGA 412

Query: 192 MSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQG 240
           +SSGLHFMNF AP+A + GQQ    A   NH  +E   N   G               + 
Sbjct: 413 VSSGLHFMNFAAPMAFLTGQQ--QLATTSNHEINEDSNNNEGG---------------RS 457

[Close]

BLAST of Cp4.1LG18g07860.1 vs. NCBI nr
Match: gi|659105880|ref|XP_008453196.1| (PREDICTED: transcription factor TCP14 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 220/248 (88.71%), Postives = 225/248 (90.73%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSS G+IPASHGG
Sbjct: 224 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSTGTIPASHGG 283

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 284 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 343

Query: 181 GSGAGGG--------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDR 240
           GS  GGG        N SS+EGHLNILAGLNPYRSVS TG+ME QGSGS SHHGGGGDDR
Sbjct: 344 GSSTGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHGGGGDDR 403

[Close]

BLAST of Cp4.1LG18g07860.1 vs. NCBI nr
Match: gi|778655944|ref|XP_004138164.2| (PREDICTED: transcription factor TCP14 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 7.8e-110
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 169 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 228

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 229 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 288

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 289 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 348

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHH--GGGG 240
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHH  GGGG
Sbjct: 349 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 408

[Close]

BLAST of Cp4.1LG18g07860.1 vs. NCBI nr
Match: gi|700208568|gb|KGN63664.1| (Transcription factor [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 7.8e-110
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 63  MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 122

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 123 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 182

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 183 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 242

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHH--GGGG 240
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHH  GGGG
Sbjct: 243 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 302

[Close]

BLAST of Cp4.1LG18g07860.1 vs. NCBI nr
Match: gi|590667789|ref|XP_007037311.1| (TCP domain-like protein I [Theobroma cacao])

HSP 1 Score: 293.9 bits (751), Expect = 2.5e-76
Identity = 168/251 (66.93%), Postives = 192/251 (76.49%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSS + N NFS+ Q RR+LFPG GL + P   A LNFQS++  NS+ QAK EL
Sbjct: 164 MSVPSQLRSSGF-NSNFSMQQ-RRSLFPGIGLETTP---AFLNFQSSSNLNSMFQAKQEL 223

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN+TS L++S+  EE ++GRKRRP  +       SSQHQMG YLLQSS G+IPASHG  
Sbjct: 224 RDNSTS-LEISET-EEGTLGRKRRPEPDL------SSQHQMGSYLLQSSTGAIPASHG-- 283

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWM+TN+NNQVM GDPIWTFPSVNNS LYRGTMSSGLHFMNFPAP+AL+PGQQ G
Sbjct: 284 QIPANFWMVTNSNNQVMSGDPIWTFPSVNNSALYRGTMSSGLHFMNFPAPMALLPGQQLG 343

Query: 181 S------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG------G 240
           S      G  GG+   SEGHLN+LAGLNPYR VS  G+ E Q SGSHSHHGGG      G
Sbjct: 344 SSGVTSGGGSGGSSGISEGHLNMLAGLNPYRQVSGIGVSESQASGSHSHHGGGGGGGGCG 399

[Close]

BLAST of Cp4.1LG18g07860.1 vs. NCBI nr
Match: gi|802652980|ref|XP_012080249.1| (PREDICTED: transcription factor TCP14 [Jatropha curcas])

HSP 1 Score: 283.5 bits (724), Expect = 3.4e-73
Identity = 169/254 (66.54%), Postives = 190/254 (74.80%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRS+S+ NPNFS+ Q RR+LFPG GL + P+ T  LNFQS+N+ N++LQAK EL
Sbjct: 165 MSVPSQLRSASF-NPNFSMQQ-RRSLFPGIGLETSPTPT-FLNFQSSNL-NAVLQAKQEL 224

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RD  TSSL+LS   EE S+GRKRRP  EQ+LSS    QHQMG YLLQSS G+IPA+H   
Sbjct: 225 RD--TSSLELSTETEE-SLGRKRRP--EQDLSSQ---QHQMGSYLLQSSTGAIPATHS-- 284

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWML N NNQVM GDPIWTFPSVNNSGLYR T SSGLHFMNFP PVAL+P QQ G
Sbjct: 285 QIPANFWMLANPNNQVMSGDPIWTFPSVNNSGLYRSTTSSGLHFMNFPTPVALLPSQQLG 344

Query: 181 S-----------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG-- 240
           S           G  GGN   +EGHLN+LAGLNPYR     G+ E Q SGSHSHHGGG  
Sbjct: 345 SSSISGGGGSAGGGSGGNSGITEGHLNMLAGLNPYRH---PGVSESQASGSHSHHGGGGG 401

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g07860.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP15_ARATH	2.8e-14	40.11	Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1	[more]
TCP14_ARATH	1.4e-10	28.63	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g07860.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRN4_CUCSA	5.5e-110	87.65	Transcription factor OS=Cucumis sativus GN=Csa_1G009680 PE=4 SV=1	[more]
A0A061FY58_THECC	1.8e-76	66.93	TCP domain-like protein I OS=Theobroma cacao GN=TCM_013943 PE=4 SV=1	[more]
A0A067K8C7_JATCU	2.4e-73	66.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11614 PE=4 SV=1	[more]
U5FYG4_POPTR	1.6e-72	67.61	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05430g PE=4 SV=1	[more]
U5GE74_POPTR	5.9e-72	67.34	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04600g PE=4 SV=1	[more]

BLAST of Cp4.1LG18g07860.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69690.1	1.6e-15	40.11	TCP family transcription factor	[more]
AT3G47620.1	8.0e-12	28.63	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]

BLAST of Cp4.1LG18g07860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105880\|ref\|XP_008453196.1\|	3.2e-111	88.71	PREDICTED: transcription factor TCP14 [Cucumis melo]	[more]
gi\|778655944\|ref\|XP_004138164.2\|	7.8e-110	87.65	PREDICTED: transcription factor TCP14 [Cucumis sativus]	[more]
gi\|700208568\|gb\|KGN63664.1\|	7.8e-110	87.65	Transcription factor [Cucumis sativus]	[more]
gi\|590667789\|ref\|XP_007037311.1\|	2.5e-76	66.93	TCP domain-like protein I [Theobroma cacao]	[more]
gi\|802652980\|ref\|XP_012080249.1\|	3.4e-73	66.54	PREDICTED: transcription factor TCP14 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG18g07860	Cp4.1LG18g07860	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g07860.1:cds:001	Cp4.1LG18g07860.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g07860.1	Cp4.1LG18g07860.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 1..238 score: 5.8
None	No IPR available	PANTHER	PTHR31072:SF11	SUBFAMILY NOT NAMED	coord: 1..238 score: 5.8