Cp4.1LG18g07860 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g07860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transcription factor
Location	Cp4.1LG18 : 7484052 .. 7484771 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

mRNA sequence

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

Coding sequence (CDS)

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

Protein sequence

MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGGQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS

Homology

[Close]

BLAST of Cp4.1LG18g07860 vs. Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 71/177 (40.11%), Postives = 87/177 (49.15%), Query Frame = 1


Query: 84  RPSTEQELSSSSSSQ----HQMGGYLLQSSAGSIPASHGGGQVPANFWML-TNTNNQVMG 143
           RP  E   SSSSSSQ    +QMG YL+QS+AGS+P S      P  FW    NT N    
Sbjct: 162 RPKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN---- 221

Query: 144 GDPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGAGGGN 203
              +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG 
Sbjct: 222 ---LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGG 281

Query: 204 HSSSE-GHLNILAGLN-PYRSVSTTG---IMEQQGSGSHSHHGGGGDDRHDSTSHHS 240
               E  H  +LA LN  YR V+ TG     +Q   G H H+         STSHHS
Sbjct: 282 GGGGEHSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHN----HQEDGSTSHHS 325

[Close]

BLAST of Cp4.1LG18g07860 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 75/262 (28.63%), Postives = 106/262 (40.46%), Query Frame = 1


Query: 12  YYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLS 71
           +++P+     P  +LFPG  + +   +T+ LNF +           P  ++    S    
Sbjct: 233 FHHPHLQGRAPTSSLFPG--IDNFTPTTSFLNFHN-----------PTKQEGDQDS---- 292

Query: 72  DAAEEISIGRKRRPSTEQELSSSSSS-QH-QMGGYLLQSS-AGSIPASHGGGQVPANF-- 131
              EE++  +KRR  T  +L       QH Q+GGY LQSS +GS   +    Q+P NF  
Sbjct: 293 ---EELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 352

Query: 132 -------------------WMLTNTNNQVMGGDPIWTFPSVNN----------SGLYRGT 191
                               M  +      GG+P+WTFPS+N           SG+  G 
Sbjct: 353 VAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGA 412

Query: 192 MSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQG 240
           +SSGLHFMNF AP+A + GQQ    A   NH  +E   N   G               + 
Sbjct: 413 VSSGLHFMNFAAPMAFLTGQQ--QLATTSNHEINEDSNNNEGG---------------RS 457

[Close]

BLAST of Cp4.1LG18g07860 vs. TrEMBL
Match: A0A0A0LRN4_CUCSA (Transcription factor OS=Cucumis sativus GN=Csa_1G009680 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.5e-110
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 63  MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 122

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 123 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 182

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 183 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 242

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHH--GGGG 240
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHH  GGGG
Sbjct: 243 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 302

[Close]

BLAST of Cp4.1LG18g07860 vs. TrEMBL
Match: A0A061FY58_THECC (TCP domain-like protein I OS=Theobroma cacao GN=TCM_013943 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76
Identity = 168/251 (66.93%), Postives = 192/251 (76.49%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSS + N NFS+ Q RR+LFPG GL + P   A LNFQS++  NS+ QAK EL
Sbjct: 164 MSVPSQLRSSGF-NSNFSMQQ-RRSLFPGIGLETTP---AFLNFQSSSNLNSMFQAKQEL 223

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN+TS L++S+  EE ++GRKRRP  +       SSQHQMG YLLQSS G+IPASHG  
Sbjct: 224 RDNSTS-LEISET-EEGTLGRKRRPEPDL------SSQHQMGSYLLQSSTGAIPASHG-- 283

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWM+TN+NNQVM GDPIWTFPSVNNS LYRGTMSSGLHFMNFPAP+AL+PGQQ G
Sbjct: 284 QIPANFWMVTNSNNQVMSGDPIWTFPSVNNSALYRGTMSSGLHFMNFPAPMALLPGQQLG 343

Query: 181 S------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG------G 240
           S      G  GG+   SEGHLN+LAGLNPYR VS  G+ E Q SGSHSHHGGG      G
Sbjct: 344 SSGVTSGGGSGGSSGISEGHLNMLAGLNPYRQVSGIGVSESQASGSHSHHGGGGGGGGCG 399

[Close]

BLAST of Cp4.1LG18g07860 vs. TrEMBL
Match: A0A067K8C7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11614 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 169/254 (66.54%), Postives = 190/254 (74.80%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRS+S+ NPNFS+ Q RR+LFPG GL + P+ T  LNFQS+N+ N++LQAK EL
Sbjct: 165 MSVPSQLRSASF-NPNFSMQQ-RRSLFPGIGLETSPTPT-FLNFQSSNL-NAVLQAKQEL 224

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RD  TSSL+LS   EE S+GRKRRP  EQ+LSS    QHQMG YLLQSS G+IPA+H   
Sbjct: 225 RD--TSSLELSTETEE-SLGRKRRP--EQDLSSQ---QHQMGSYLLQSSTGAIPATHS-- 284

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWML N NNQVM GDPIWTFPSVNNSGLYR T SSGLHFMNFP PVAL+P QQ G
Sbjct: 285 QIPANFWMLANPNNQVMSGDPIWTFPSVNNSGLYRSTTSSGLHFMNFPTPVALLPSQQLG 344

Query: 181 S-----------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG-- 240
           S           G  GGN   +EGHLN+LAGLNPYR     G+ E Q SGSHSHHGGG  
Sbjct: 345 SSSISGGGGSAGGGSGGNSGITEGHLNMLAGLNPYRH---PGVSESQASGSHSHHGGGGG 401

[Close]

BLAST of Cp4.1LG18g07860 vs. TrEMBL
Match: U5FYG4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05430g PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 167/247 (67.61%), Postives = 189/247 (76.52%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MS+PS LRS S+ NPNFSL Q  R+LFPG GL +    T  L+FQS+N  N++LQAK EL
Sbjct: 163 MSIPSHLRSGSF-NPNFSLQQRSRSLFPGIGLETSQPPT-FLSFQSSNNLNAVLQAKQEL 222

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN  SSL+LS   EE S+ RKRR  +EQ+LS S   QHQMG YLLQSSAG+IPASHG  
Sbjct: 223 RDN--SSLELSTETEE-SLSRKRR--SEQDLSPSQ--QHQMGNYLLQSSAGAIPASHG-- 282

Query: 121 QVPANFWMLTNTN-NQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
           Q+PANFWML N+N NQVM GDPIWTFPSVNNS +YRG+MSSGLHFMNFPAPV L+P QQ 
Sbjct: 283 QIPANFWMLANSNNNQVMSGDPIWTFPSVNNSSVYRGSMSSGLHFMNFPAPVTLLPSQQL 342

Query: 181 GS----GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGG---DDRH 240
           GS    GA GGN   SEGHLN+LAGLNPYR    +G+ E Q SGSHSHHGGGG   DDRH
Sbjct: 343 GSTSIGGASGGNSGISEGHLNMLAGLNPYR---PSGLSESQASGSHSHHGGGGGGSDDRH 395

[Close]

BLAST of Cp4.1LG18g07860 vs. TrEMBL
Match: U5GE74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04600g PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.9e-72
Identity = 167/248 (67.34%), Postives = 190/248 (76.61%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MS+PSQLRS S+ +PNFSL Q  R+LFPG GL +    T  L+FQS+N  N+++QAK EL
Sbjct: 162 MSIPSQLRSGSF-SPNFSLQQRSRSLFPGIGLETSQPPT-FLSFQSSNNLNAMMQAKQEL 221

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN  SSL+LS   EE S  RKRRP  EQ+LSSS   QHQMG YLLQSS+G++PASHG  
Sbjct: 222 RDN--SSLELSTETEE-SFNRKRRP--EQDLSSSQ--QHQMGSYLLQSSSGAVPASHG-- 281

Query: 121 QVPANFWMLTNTN-NQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
           Q+PANFWML N+N NQVM GDPIWTFPSVNNSGLYR TMSSGLHFMNFPAPV L+P QQ 
Sbjct: 282 QIPANFWMLANSNNNQVMSGDPIWTFPSVNNSGLYRSTMSSGLHFMNFPAPVTLLPSQQL 341

Query: 181 GS----GAGGGNHSSSE-GHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGG---DDR 240
           GS    G+  GN   SE GHLN+LAGLNPYR+   +GI E Q SGSHSHHGGGG   DDR
Sbjct: 342 GSTSIGGSSAGNSGMSELGHLNMLAGLNPYRA---SGISESQASGSHSHHGGGGGGSDDR 395

[Close]

BLAST of Cp4.1LG18g07860 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-15
Identity = 71/177 (40.11%), Postives = 87/177 (49.15%), Query Frame = 1


Query: 84  RPSTEQELSSSSSSQ----HQMGGYLLQSSAGSIPASHGGGQVPANFWML-TNTNNQVMG 143
           RP  E   SSSSSSQ    +QMG YL+QS+AGS+P S      P  FW    NT N    
Sbjct: 162 RPKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN---- 221

Query: 144 GDPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGAGGGN 203
              +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG 
Sbjct: 222 ---LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGG 281

Query: 204 HSSSE-GHLNILAGLN-PYRSVSTTG---IMEQQGSGSHSHHGGGGDDRHDSTSHHS 240
               E  H  +LA LN  YR V+ TG     +Q   G H H+         STSHHS
Sbjct: 282 GGGGEHSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHN----HQEDGSTSHHS 325

[Close]

BLAST of Cp4.1LG18g07860 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 68.2 bits (165), Expect = 8.0e-12
Identity = 75/262 (28.63%), Postives = 106/262 (40.46%), Query Frame = 1


Query: 12  YYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLS 71
           +++P+     P  +LFPG  + +   +T+ LNF +           P  ++    S    
Sbjct: 233 FHHPHLQGRAPTSSLFPG--IDNFTPTTSFLNFHN-----------PTKQEGDQDS---- 292

Query: 72  DAAEEISIGRKRRPSTEQELSSSSSS-QH-QMGGYLLQSS-AGSIPASHGGGQVPANF-- 131
              EE++  +KRR  T  +L       QH Q+GGY LQSS +GS   +    Q+P NF  
Sbjct: 293 ---EELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 352

Query: 132 -------------------WMLTNTNNQVMGGDPIWTFPSVNN----------SGLYRGT 191
                               M  +      GG+P+WTFPS+N           SG+  G 
Sbjct: 353 VAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGA 412

Query: 192 MSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQG 240
           +SSGLHFMNF AP+A + GQQ    A   NH  +E   N   G               + 
Sbjct: 413 VSSGLHFMNFAAPMAFLTGQQ--QLATTSNHEINEDSNNNEGG---------------RS 457

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: gi|659105880|ref|XP_008453196.1| (PREDICTED: transcription factor TCP14 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 220/248 (88.71%), Postives = 225/248 (90.73%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSS G+IPASHGG
Sbjct: 224 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSTGTIPASHGG 283

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 284 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 343

Query: 181 GSGAGGG--------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDR 240
           GS  GGG        N SS+EGHLNILAGLNPYRSVS TG+ME QGSGS SHHGGGGDDR
Sbjct: 344 GSSTGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHGGGGDDR 403

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: gi|778655944|ref|XP_004138164.2| (PREDICTED: transcription factor TCP14 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 7.8e-110
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 169 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 228

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 229 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 288

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 289 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 348

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHH--GGGG 240
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHH  GGGG
Sbjct: 349 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 408

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: gi|700208568|gb|KGN63664.1| (Transcription factor [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 7.8e-110
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 63  MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 122

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 123 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 182

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 183 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 242

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHH--GGGG 240
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHH  GGGG
Sbjct: 243 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 302

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: gi|590667789|ref|XP_007037311.1| (TCP domain-like protein I [Theobroma cacao])

HSP 1 Score: 293.9 bits (751), Expect = 2.5e-76
Identity = 168/251 (66.93%), Postives = 192/251 (76.49%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSS + N NFS+ Q RR+LFPG GL + P   A LNFQS++  NS+ QAK EL
Sbjct: 164 MSVPSQLRSSGF-NSNFSMQQ-RRSLFPGIGLETTP---AFLNFQSSSNLNSMFQAKQEL 223

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDN+TS L++S+  EE ++GRKRRP  +       SSQHQMG YLLQSS G+IPASHG  
Sbjct: 224 RDNSTS-LEISET-EEGTLGRKRRPEPDL------SSQHQMGSYLLQSSTGAIPASHG-- 283

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWM+TN+NNQVM GDPIWTFPSVNNS LYRGTMSSGLHFMNFPAP+AL+PGQQ G
Sbjct: 284 QIPANFWMVTNSNNQVMSGDPIWTFPSVNNSALYRGTMSSGLHFMNFPAPMALLPGQQLG 343

Query: 181 S------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG------G 240
           S      G  GG+   SEGHLN+LAGLNPYR VS  G+ E Q SGSHSHHGGG      G
Sbjct: 344 SSGVTSGGGSGGSSGISEGHLNMLAGLNPYRQVSGIGVSESQASGSHSHHGGGGGGGGCG 399

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: gi|802652980|ref|XP_012080249.1| (PREDICTED: transcription factor TCP14 [Jatropha curcas])

HSP 1 Score: 283.5 bits (724), Expect = 3.4e-73
Identity = 169/254 (66.54%), Postives = 190/254 (74.80%), Query Frame = 1


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRS+S+ NPNFS+ Q RR+LFPG GL + P+ T  LNFQS+N+ N++LQAK EL
Sbjct: 165 MSVPSQLRSASF-NPNFSMQQ-RRSLFPGIGLETSPTPT-FLNFQSSNL-NAVLQAKQEL 224

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RD  TSSL+LS   EE S+GRKRRP  EQ+LSS    QHQMG YLLQSS G+IPA+H   
Sbjct: 225 RD--TSSLELSTETEE-SLGRKRRP--EQDLSSQ---QHQMGSYLLQSSTGAIPATHS-- 284

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           Q+PANFWML N NNQVM GDPIWTFPSVNNSGLYR T SSGLHFMNFP PVAL+P QQ G
Sbjct: 285 QIPANFWMLANPNNQVMSGDPIWTFPSVNNSGLYRSTTSSGLHFMNFPTPVALLPSQQLG 344

Query: 181 S-----------GAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGG-- 240
           S           G  GGN   +EGHLN+LAGLNPYR     G+ E Q SGSHSHHGGG  
Sbjct: 345 SSSISGGGGSAGGGSGGNSGITEGHLNMLAGLNPYRH---PGVSESQASGSHSHHGGGGG 401

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g07860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP15_ARATH	2.8e-14	40.11	Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1	[more]
TCP14_ARATH	1.4e-10	28.63	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g07860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRN4_CUCSA	5.5e-110	87.65	Transcription factor OS=Cucumis sativus GN=Csa_1G009680 PE=4 SV=1	[more]
A0A061FY58_THECC	1.8e-76	66.93	TCP domain-like protein I OS=Theobroma cacao GN=TCM_013943 PE=4 SV=1	[more]
A0A067K8C7_JATCU	2.4e-73	66.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11614 PE=4 SV=1	[more]
U5FYG4_POPTR	1.6e-72	67.61	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05430g PE=4 SV=1	[more]
U5GE74_POPTR	5.9e-72	67.34	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04600g PE=4 SV=1	[more]

BLAST of Cp4.1LG18g07860 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69690.1	1.6e-15	40.11	TCP family transcription factor	[more]
AT3G47620.1	8.0e-12	28.63	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]

BLAST of Cp4.1LG18g07860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105880\|ref\|XP_008453196.1\|	3.2e-111	88.71	PREDICTED: transcription factor TCP14 [Cucumis melo]	[more]
gi\|778655944\|ref\|XP_004138164.2\|	7.8e-110	87.65	PREDICTED: transcription factor TCP14 [Cucumis sativus]	[more]
gi\|700208568\|gb\|KGN63664.1\|	7.8e-110	87.65	Transcription factor [Cucumis sativus]	[more]
gi\|590667789\|ref\|XP_007037311.1\|	2.5e-76	66.93	TCP domain-like protein I [Theobroma cacao]	[more]
gi\|802652980\|ref\|XP_012080249.1\|	3.4e-73	66.54	PREDICTED: transcription factor TCP14 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009725	response to hormone
biological_process	GO:0010229	inflorescence development
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0008283	cell proliferation
biological_process	GO:0044699	single-organism process
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0033993	response to lipid
biological_process	GO:0001101	response to acid chemical
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g07860.1	Cp4.1LG18g07860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 1..238 score: 5.8
None	No IPR available	PANTHER	PTHR31072:SF11	SUBFAMILY NOT NAMED	coord: 1..238 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g07860	Cucsa.197650	Cucumber (Gy14) v1	cgycpeB0556
Cp4.1LG18g07860	CmaCh10G001860	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g07860	CmoCh10G002030	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g07860	CmoCh11G001590	Cucurbita moschata (Rifu)	cmocpeB109
Cp4.1LG18g07860	Cla019117	Watermelon (97103) v1	cpewmB373
Cp4.1LG18g07860	Csa1G009680	Cucumber (Chinese Long) v2	cpecuB361
Cp4.1LG18g07860	MELO3C017168	Melon (DHL92) v3.5.1	cpemeB328
Cp4.1LG18g07860	ClCG06G016250	Watermelon (Charleston Gray)	cpewcgB336
Cp4.1LG18g07860	CSPI01G02220	Wild cucumber (PI 183967)	cpecpiB361
Cp4.1LG18g07860	Lsi06G014720	Bottle gourd (USVL1VR-Ls)	cpelsiB298
Cp4.1LG18g07860	MELO3C017168.2	Melon (DHL92) v3.6.1	cpemedB386
Cp4.1LG18g07860	CsaV3_1G002280	Cucumber (Chinese Long) v3	cpecucB0442
Cp4.1LG18g07860	Bhi02G000235	Wax gourd	cpewgoB0459
Cp4.1LG18g07860	CsGy1G002270	Cucumber (Gy14) v2	cgybcpeB053
Cp4.1LG18g07860	Carg18184	Silver-seed gourd	carcpeB0871
Cp4.1LG18g07860	Carg10408	Silver-seed gourd	carcpeB0508

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG18g07860	Cp4.1LG09g01870	Cucurbita pepo (Zucchini)	cpecpeB031
Cp4.1LG18g07860	Cp4.1LG01g12420	Cucurbita pepo (Zucchini)	cpecpeB346
Cp4.1LG18g07860	Cp4.1LG04g15080	Cucurbita pepo (Zucchini)	cpecpeB361

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g07860	Cucumber (Chinese Long) v3	cpecucB0448
Cp4.1LG18g07860	Cucurbita pepo (Zucchini)	cpecpeB347
Cp4.1LG18g07860	Cucurbita pepo (Zucchini)	cpecpeB353
Cp4.1LG18g07860	Cucumber (Gy14) v1	cgycpeB0254
Cp4.1LG18g07860	Cucurbita maxima (Rimu)	cmacpeB127
Cp4.1LG18g07860	Wild cucumber (PI 183967)	cpecpiB366
Cp4.1LG18g07860	Cucumber (Chinese Long) v2	cpecuB366