Cp4.1LG17g09380.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g09380.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Receptor-like protein kinase
Location	Cp4.1LG17 : 7240175 .. 7241529 (-)
Sequence length	849

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTTTCTCTCTCTGCATTAATGATTATACTCCTTTGCTTTTCTAGGTAAGAAACTTGATTACAATTGCATGCTTAATCCATGGCTTGGTGGCATTCATCTTGAATAGGTATACTGACAAGAGCGACATTTTCAGCTTTGGGGTGATACTGAGCGTTTTGTTAACTGGTAGAGATCCGAGGGAGCGGGCATTGTCGAACCGAGAGGATGGGAGTGGCAGTGGGGGGAGTGTAGGACGGTGGCTCGAGGAATCAGTGGAGCCGCGAGAATTGCCCGAGGACAGGCCCTGCAGCGATGAGTTACTTGTGATGCTGACCCAATTACAGAGCTTTTGAAGCAGTTGGCTCAGTCCGATTATGGCAAACGATCTACTCATGCTCCAATAGTCGCAAAATTCTCAGATATTTAAGCTCTTCAACAAAAAAGATTAACCACCGAATAAAAACATATCTACGGATTCGCTTCAAGAATGTTCTTGATATGAGAAAAATGAAAAAGAAAATGATAGATAAAGGGACAATACTAATATTCTAAGAATAATACATCCATTCAAGCCTTCACAACCACTAGTTTGTTCTTTTTTCCTCTAAATAATTGGTCCAAAACCTTATCCAGTCGCGAGATATCTGCCATCTTTTATCTGTTTAACCTTTTTTAAGTCTGAATCCTACTCTCAAGAAGTATCCAAGCATCAACTTCGCAGCAGATTGATCCATTCTTCACCACTTTCCTTAGCATCTCCATCATCATGCTCTCTCTTCCCACCAACCACCAAATCAAAGGCCTTCTCAATGCCTATGAGGTCCCTACGAAGGCACCCCACCTCTCAAACTCAACGTCAACGTCCCACCCTACAAATAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACAGTTGACTACAATATGTCTGATTCAATACCCCTTTTCGTTTGCTGCTCTTCTGTGTCTGTTTCTACAGAGCTTTTCCAGCTGAGGCTTGTGACACTATTGGAGGGGAAACTTGTGATGTTGAAATGTATCCGGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGCGCAGTGTTTCGGAGCCTGTCGATAGAGAGTATCGACAGTATGACTGTCCCAAGATGTAAGATCTCAACAAAACAACCCATTTGCACCAACTCATTTCTTGTGAAGCAACACTACTTTAAACATCTATAGGCAATATGATACATTATTCTTGAGATTTAACGATTGTTGCAGAGTCTTTCCAGCGGAGGCTTGTGATGATCTGGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGGGTTTACTATAAAATCTTAACGGGAACCAGGATTTGTAAACAAGGGTTGAGCCCA

mRNA sequence

ATGTCAAACTTGATTACAATTGCATGCTTAATCCATGGCTTGGTGGCATTCATCTTGAATAGGTATACTGACAAGAGCGACATTTTCAGCTTTGGGGTGATACTGAGCGTTTTGTTAACTGGTAGAGATCCGAGGGAGCGGGCATTGTCGAACCGAGAGGATGGGAGTGGCAGTGGGGGGAGTGTAGGACGGTGGCTCGAGGAATCAGTGGAGCCGCGAGAATTGCCCGAGGACAGGCCCTGCAGCGATGAGTTACTTTCTGAATCCTACTCTCAAGAAGTATCCAAGCATCAACTTCGCAGCAGATTGATCCATTCTTCACCACTTTCCTTAGCATCTCCATCATCATGCTCTCTCTTCCCACCAACCACCAAATCAAAGGCCTTCTCAATGCCTATGAGGTCCCTACGAAGGCACCCCACCTCTCAAACTCAACGTCAACGTCCCACCCTACAAATAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACAGTTGACTACAATATGTCTGATTCAATACCCCTTTTCGTTTGCTGCTCTTCTGTGTCTGTTTCTACAGAGCTTTTCCAGCTGAGGCTTGTGACACTATTGGAGGGGAAACTTGTGATTAAAGCTAAAACCAGAGGCCAAGAAGGGGGCGCAGTGTTTCGGAGCCTGTCGATAGAGAGTATCGACAGTATGACTGTCCCAAGATGTAAGATCTCAACAAAACAACCCATTTGCACCAACTCATTTCTTCGGAGGCTTGTGATGATCTGGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGGGTTTACTATAAAATCTTAACGGGAACCAGGATTTGTAAACAAGGGTTGAGCCCA

Coding sequence (CDS)

ATGTCAAACTTGATTACAATTGCATGCTTAATCCATGGCTTGGTGGCATTCATCTTGAATAGGTATACTGACAAGAGCGACATTTTCAGCTTTGGGGTGATACTGAGCGTTTTGTTAACTGGTAGAGATCCGAGGGAGCGGGCATTGTCGAACCGAGAGGATGGGAGTGGCAGTGGGGGGAGTGTAGGACGGTGGCTCGAGGAATCAGTGGAGCCGCGAGAATTGCCCGAGGACAGGCCCTGCAGCGATGAGTTACTTTCTGAATCCTACTCTCAAGAAGTATCCAAGCATCAACTTCGCAGCAGATTGATCCATTCTTCACCACTTTCCTTAGCATCTCCATCATCATGCTCTCTCTTCCCACCAACCACCAAATCAAAGGCCTTCTCAATGCCTATGAGGTCCCTACGAAGGCACCCCACCTCTCAAACTCAACGTCAACGTCCCACCCTACAAATAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACAGTTGACTACAATATGTCTGATTCAATACCCCTTTTCGTTTGCTGCTCTTCTGTGTCTGTTTCTACAGAGCTTTTCCAGCTGAGGCTTGTGACACTATTGGAGGGGAAACTTGTGATTAAAGCTAAAACCAGAGGCCAAGAAGGGGGCGCAGTGTTTCGGAGCCTGTCGATAGAGAGTATCGACAGTATGACTGTCCCAAGATGTAAGATCTCAACAAAACAACCCATTTGCACCAACTCATTTCTTCGGAGGCTTGTGATGATCTGGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGGGTTTACTATAAAATCTTAACGGGAACCAGGATTTGTAAACAAGGGTTGAGCCCA

Protein sequence

MSNLITIACLIHGLVAFILNRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYNMSDSIPLFVCCSSVSVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESIDSMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVYYKILTGTRICKQGLSP

Homology

[Close]

BLAST of Cp4.1LG17g09380.1 vs. Swiss-Prot
Match: CRN_ARATH (Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana GN=CRN PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.4e-09
Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
           NRYTDKSDIFSFG+IL VLLTGRDP         + S SGGS+G+WL+   +  E  E  
Sbjct: 298 NRYTDKSDIFSFGMILGVLLTGRDPTHPFC----EESASGGSLGQWLKHLQQSGEARE-- 357

Query: 80  PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
                +L E   ++     LR  +I  S      PSS  L    T+  +F
Sbjct: 358 ALDKTILGEEVEEDEMLMALRITIICLSDFPADRPSSDELVHMLTQLHSF 401

[Close]

BLAST of Cp4.1LG17g09380.1 vs. TrEMBL
Match: A0A0A0KAB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091860 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+E+SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVEQSVEPRE--- 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCS 119
                  ++ E   +E  +  L  R+       LA    CS
Sbjct: 339 --ALDKTIIGEGMEEEEEEMVLALRIAGVCTSELAEDRPCS 374

[Close]

BLAST of Cp4.1LG17g09380.1 vs. TrEMBL
Match: E5GB59_CUCME (Receptor-like protein kinase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+++SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVKQSVEPRE-AL 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
           D+    E + E   +E+    LR   + +S L+   P S  L    T+ ++F
Sbjct: 339 DKSIRGEGMEEEEEEEMVL-ALRIAGVCTSELAEDRPCSDELLVMLTQLQSF 388

[Close]

BLAST of Cp4.1LG17g09380.1 vs. TrEMBL
Match: Q39636_CUCSA (CR9 protein OS=Cucumis sativus GN=CR9 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1


Query: 109 LSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYN 168
           LS+ASPS CSL PPT KS AFS+P RS+ R       + + TL+ KASAVGQDPSTVDY+
Sbjct: 7   LSIASPS-CSLLPPTAKSMAFSIPTRSMPR-------QSKGTLKAKASAVGQDPSTVDYS 66

Query: 169 MSDSIPLFVCCSSV---SVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESID 228
              S+     C +V   +   E++             +K K   ++G +V   +  E + 
Sbjct: 67  SMSSVFPAEACDTVGGEACDVEMYP-----------EVKLKPEAKKGNSVTEPVEREYLQ 126

Query: 229 SMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVY 268
                  K       C +          GGEFCDPEYQKGVY
Sbjct: 127 ---YDSPKTVFPAEACDD---------LGGEFCDPEYQKGVY 137

[Close]

BLAST of Cp4.1LG17g09380.1 vs. TrEMBL
Match: A0A103XVW0_CYNCS (Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_000022 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.4e-08
Identity = 75/255 (29.41%), Postives = 103/255 (40.39%), Query Frame = 1


Query: 20   NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
            ++YT+KSDIFSFGVIL VLLTGRDP +        G GS G +G W    +E  +  E  
Sbjct: 1204 SKYTEKSDIFSFGVILGVLLTGRDPSDPLFG---IGEGSRGDMGMWFRAVLEAGDGRE-- 1263

Query: 80   PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAFSMPMRSLRRH 139
                 LL E   ++     +R   +  S +    PSS  L P  T+      P       
Sbjct: 1264 ALDKSLLGEEMEEDEMLMAVRIAAVCLSDMPADRPSSDELVPMLTQLHILKPPQ------ 1323

Query: 140  PTSQTQRQRPTLQIKASAVGQDPST-------VDYN-MSDSI-PLFVC--CSSVSVSTEL 199
                 Q   P+++ KA+A     S+       VDYN M+ S+ P   C     V+   E+
Sbjct: 1324 -----QMSTPSIKFKAAASSSSSSSSSDTLPQVDYNSMASSVFPAEACETVGGVACDVEM 1383

Query: 200  FQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESIDSMTVPRCKISTKQPICTNSFLRR 259
            F        E KL  +A+ +             +   S  V R  +    P     F+  
Sbjct: 1384 FP-------ETKLREEAEPKA------------KVTTSQAVDREYVEYNNP--KTVFIAE 1421

Query: 260  LVMIWGGEFCDPEYQ 264
                 GGEFCD  YQ
Sbjct: 1444 ACDDLGGEFCDAAYQ 1421

[Close]

BLAST of Cp4.1LG17g09380.1 vs. TrEMBL
Match: A0A164TGP6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024629 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-08
Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 1


Query: 21  RYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDRP 80
           RY+DKSDIFSFGVIL +LLTGRDP    L    + + SGGS+GRWL +  E  E  E   
Sbjct: 238 RYSDKSDIFSFGVILGILLTGRDP----LDPFFEETSSGGSLGRWLHQVQEAGEAQE--A 297

Query: 81  CSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
               ++ E   ++     LR  ++  S L    PSS  L P  T+  +F
Sbjct: 298 LDKSIIGEEVEEDEMLMALRIAVVCQSDLPADRPSSDELVPMLTQLHSF 340

[Close]

BLAST of Cp4.1LG17g09380.1 vs. TAIR10
Match: AT5G13290.2 (AT5G13290.2 Protein kinase superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
           NRYTDKSDIFSFG+IL VLLTGRDP         + S SGGS+G+WL+   +  E  E  
Sbjct: 298 NRYTDKSDIFSFGMILGVLLTGRDPTHPFC----EESASGGSLGQWLKHLQQSGEARE-- 357

Query: 80  PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
                +L E   ++     LR  +I  S      PSS  L    T+  +F
Sbjct: 358 ALDKTILGEEVEEDEMLMALRITIICLSDFPADRPSSDELVHMLTQLHSF 401

[Close]

BLAST of Cp4.1LG17g09380.1 vs. NCBI nr
Match: gi|449445592|ref|XP_004140556.1| (PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-13
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+E+SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVEQSVEPRE--- 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCS 119
                  ++ E   +E  +  L  R+       LA    CS
Sbjct: 339 --ALDKTIIGEGMEEEEEEMVLALRIAGVCTSELAEDRPCS 374

[Close]

BLAST of Cp4.1LG17g09380.1 vs. NCBI nr
Match: gi|525506955|ref|NP_001267523.1| (light-regulated protein-like [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1


Query: 109 LSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYN 168
           LS+ASPS CSL PPT KS AFS+P RS+ R       + + TL+ KASAVGQDPSTVDY+
Sbjct: 7   LSIASPS-CSLLPPTAKSMAFSIPTRSMPR-------QSKGTLKAKASAVGQDPSTVDYS 66

Query: 169 MSDSIPLFVCCSSV---SVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESID 228
              S+     C +V   +   E++             +K K   ++G +V   +  E + 
Sbjct: 67  SMSSVFPAEACDTVGGEACDVEMYP-----------EVKLKPEAKKGNSVTEPVEREYLQ 126

Query: 229 SMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVY 268
                  K       C +          GGEFCDPEYQKGVY
Sbjct: 127 ---YDSPKTVFPAEACDD---------LGGEFCDPEYQKGVY 137

[Close]

BLAST of Cp4.1LG17g09380.1 vs. NCBI nr
Match: gi|659119914|ref|XP_008459910.1| (PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+++SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVKQSVEPRE-AL 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
           D+    E + E   +E+    LR   + +S L+   P S  L    T+ ++F
Sbjct: 339 DKSIRGEGMEEEEEEEMVL-ALRIAGVCTSELAEDRPCSDELLVMLTQLQSF 388

[Close]

BLAST of Cp4.1LG17g09380.1 vs. NCBI nr
Match: gi|659119906|ref|XP_008459906.1| (PREDICTED: light-regulated protein-like [Cucumis melo])

HSP 1 Score: 73.6 bits (179), Expect = 6.4e-10
Identity = 59/162 (36.42%), Postives = 78/162 (48.15%), Query Frame = 1


Query: 109 LSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYN 168
           LS+A PS CSL PPT K  AFS+  RSL R       + + TL+ KASAVGQ+PSTVDY+
Sbjct: 7   LSIAPPS-CSLLPPTAKLMAFSIQTRSLPR-------QSQGTLKAKASAVGQEPSTVDYS 66

Query: 169 MSDSIPLFVCCSSV---SVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESID 228
              S+     C +V   +   E++             +K K   ++G +V   +  E + 
Sbjct: 67  SMSSVFPAEACDTVGGEACDVEMYP-----------EVKLKPEAKKGSSVTEPVEREYLQ 126

Query: 229 SMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVY 268
                  K       C +          GGEFCDPEYQKGVY
Sbjct: 127 ---YDSPKTVFPAEACDD---------LGGEFCDPEYQKGVY 137

[Close]

BLAST of Cp4.1LG17g09380.1 vs. NCBI nr
Match: gi|976911207|gb|KVH97863.1| (Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-08
Identity = 75/255 (29.41%), Postives = 103/255 (40.39%), Query Frame = 1


Query: 20   NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
            ++YT+KSDIFSFGVIL VLLTGRDP +        G GS G +G W    +E  +  E  
Sbjct: 1204 SKYTEKSDIFSFGVILGVLLTGRDPSDPLFG---IGEGSRGDMGMWFRAVLEAGDGRE-- 1263

Query: 80   PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAFSMPMRSLRRH 139
                 LL E   ++     +R   +  S +    PSS  L P  T+      P       
Sbjct: 1264 ALDKSLLGEEMEEDEMLMAVRIAAVCLSDMPADRPSSDELVPMLTQLHILKPPQ------ 1323

Query: 140  PTSQTQRQRPTLQIKASAVGQDPST-------VDYN-MSDSI-PLFVC--CSSVSVSTEL 199
                 Q   P+++ KA+A     S+       VDYN M+ S+ P   C     V+   E+
Sbjct: 1324 -----QMSTPSIKFKAAASSSSSSSSSDTLPQVDYNSMASSVFPAEACETVGGVACDVEM 1383

Query: 200  FQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESIDSMTVPRCKISTKQPICTNSFLRR 259
            F        E KL  +A+ +             +   S  V R  +    P     F+  
Sbjct: 1384 FP-------ETKLREEAEPKA------------KVTTSQAVDREYVEYNNP--KTVFIAE 1421

Query: 260  LVMIWGGEFCDPEYQ 264
                 GGEFCD  YQ
Sbjct: 1444 ACDDLGGEFCDAAYQ 1421

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09380.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRN_ARATH	5.4e-09	40.91	Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis ...	[more]

BLAST of Cp4.1LG17g09380.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAB3_CUCSA	1.9e-13	49.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091860 PE=4 SV=1	[more]
E5GB59_CUCME	1.3e-12	48.21	Receptor-like protein kinase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
Q39636_CUCSA	1.3e-12	38.27	CR9 protein OS=Cucumis sativus GN=CR9 PE=2 SV=1	[more]
A0A103XVW0_CYNCS	2.4e-08	29.41	Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00...	[more]
A0A164TGP6_DAUCA	3.2e-08	41.28	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024629 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g09380.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13290.2	3.1e-10	40.91	Protein kinase superfamily protein	[more]

BLAST of Cp4.1LG17g09380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445592\|ref\|XP_004140556.1\|	2.8e-13	49.50	PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cuc...	[more]
gi\|525506955\|ref\|NP_001267523.1\|	1.8e-12	38.27	light-regulated protein-like [Cucumis sativus]	[more]
gi\|659119914\|ref\|XP_008459910.1\|	1.8e-12	48.21	PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cuc...	[more]
gi\|659119906\|ref\|XP_008459906.1\|	6.4e-10	36.42	PREDICTED: light-regulated protein-like [Cucumis melo]	[more]
gi\|976911207\|gb\|KVH97863.1\|	3.5e-08	29.41	Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009653	anatomical structure morphogenesis
biological_process	GO:0048507	meristem development
biological_process	GO:0008152	metabolic process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g09380	Cp4.1LG17g09380	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g09380.1:cds:005	Cp4.1LG17g09380.1:cds:005	CDS
Cp4.1LG17g09380.1:cds:004	Cp4.1LG17g09380.1:cds:004	CDS
Cp4.1LG17g09380.1:cds:003	Cp4.1LG17g09380.1:cds:003	CDS
Cp4.1LG17g09380.1:cds:002	Cp4.1LG17g09380.1:cds:002	CDS
Cp4.1LG17g09380.1:cds:001	Cp4.1LG17g09380.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g09380.1	Cp4.1LG17g09380.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 21..149 score: 1.6
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 21..150 score: 1.
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 16..68 score: 2.0
None	No IPR available	PANTHER	PTHR27000:SF71	SUBFAMILY NOT NAMED	coord: 16..68 score: 2.0