Cp4.1LG17g09380 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g09380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Receptor-like protein kinase
Location	Cp4.1LG17 : 7240175 .. 7241529 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTTTCTCTCTCTGCATTAATGATTATACTCCTTTGCTTTTCTAGGTAAGAAACTTGATTACAATTGCATGCTTAATCCATGGCTTGGTGGCATTCATCTTGAATAGGTATACTGACAAGAGCGACATTTTCAGCTTTGGGGTGATACTGAGCGTTTTGTTAACTGGTAGAGATCCGAGGGAGCGGGCATTGTCGAACCGAGAGGATGGGAGTGGCAGTGGGGGGAGTGTAGGACGGTGGCTCGAGGAATCAGTGGAGCCGCGAGAATTGCCCGAGGACAGGCCCTGCAGCGATGAGTTACTTGTGATGCTGACCCAATTACAGAGCTTTTGAAGCAGTTGGCTCAGTCCGATTATGGCAAACGATCTACTCATGCTCCAATAGTCGCAAAATTCTCAGATATTTAAGCTCTTCAACAAAAAAGATTAACCACCGAATAAAAACATATCTACGGATTCGCTTCAAGAATGTTCTTGATATGAGAAAAATGAAAAAGAAAATGATAGATAAAGGGACAATACTAATATTCTAAGAATAATACATCCATTCAAGCCTTCACAACCACTAGTTTGTTCTTTTTTCCTCTAAATAATTGGTCCAAAACCTTATCCAGTCGCGAGATATCTGCCATCTTTTATCTGTTTAACCTTTTTTAAGTCTGAATCCTACTCTCAAGAAGTATCCAAGCATCAACTTCGCAGCAGATTGATCCATTCTTCACCACTTTCCTTAGCATCTCCATCATCATGCTCTCTCTTCCCACCAACCACCAAATCAAAGGCCTTCTCAATGCCTATGAGGTCCCTACGAAGGCACCCCACCTCTCAAACTCAACGTCAACGTCCCACCCTACAAATAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACAGTTGACTACAATATGTCTGATTCAATACCCCTTTTCGTTTGCTGCTCTTCTGTGTCTGTTTCTACAGAGCTTTTCCAGCTGAGGCTTGTGACACTATTGGAGGGGAAACTTGTGATGTTGAAATGTATCCGGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGCGCAGTGTTTCGGAGCCTGTCGATAGAGAGTATCGACAGTATGACTGTCCCAAGATGTAAGATCTCAACAAAACAACCCATTTGCACCAACTCATTTCTTGTGAAGCAACACTACTTTAAACATCTATAGGCAATATGATACATTATTCTTGAGATTTAACGATTGTTGCAGAGTCTTTCCAGCGGAGGCTTGTGATGATCTGGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGGGTTTACTATAAAATCTTAACGGGAACCAGGATTTGTAAACAAGGGTTGAGCCCA

mRNA sequence

ATGTCAAACTTGATTACAATTGCATGCTTAATCCATGGCTTGGTGGCATTCATCTTGAATAGGTATACTGACAAGAGCGACATTTTCAGCTTTGGGGTGATACTGAGCGTTTTGTTAACTGGTAGAGATCCGAGGGAGCGGGCATTGTCGAACCGAGAGGATGGGAGTGGCAGTGGGGGGAGTGTAGGACGGTGGCTCGAGGAATCAGTGGAGCCGCGAGAATTGCCCGAGGACAGGCCCTGCAGCGATGAGTTACTTTCTGAATCCTACTCTCAAGAAGTATCCAAGCATCAACTTCGCAGCAGATTGATCCATTCTTCACCACTTTCCTTAGCATCTCCATCATCATGCTCTCTCTTCCCACCAACCACCAAATCAAAGGCCTTCTCAATGCCTATGAGGTCCCTACGAAGGCACCCCACCTCTCAAACTCAACGTCAACGTCCCACCCTACAAATAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACAGTTGACTACAATATGTCTGATTCAATACCCCTTTTCGTTTGCTGCTCTTCTGTGTCTGTTTCTACAGAGCTTTTCCAGCTGAGGCTTGTGACACTATTGGAGGGGAAACTTGTGATTAAAGCTAAAACCAGAGGCCAAGAAGGGGGCGCAGTGTTTCGGAGCCTGTCGATAGAGAGTATCGACAGTATGACTGTCCCAAGATGTAAGATCTCAACAAAACAACCCATTTGCACCAACTCATTTCTTCGGAGGCTTGTGATGATCTGGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGGGTTTACTATAAAATCTTAACGGGAACCAGGATTTGTAAACAAGGGTTGAGCCCA

Coding sequence (CDS)

ATGTCAAACTTGATTACAATTGCATGCTTAATCCATGGCTTGGTGGCATTCATCTTGAATAGGTATACTGACAAGAGCGACATTTTCAGCTTTGGGGTGATACTGAGCGTTTTGTTAACTGGTAGAGATCCGAGGGAGCGGGCATTGTCGAACCGAGAGGATGGGAGTGGCAGTGGGGGGAGTGTAGGACGGTGGCTCGAGGAATCAGTGGAGCCGCGAGAATTGCCCGAGGACAGGCCCTGCAGCGATGAGTTACTTTCTGAATCCTACTCTCAAGAAGTATCCAAGCATCAACTTCGCAGCAGATTGATCCATTCTTCACCACTTTCCTTAGCATCTCCATCATCATGCTCTCTCTTCCCACCAACCACCAAATCAAAGGCCTTCTCAATGCCTATGAGGTCCCTACGAAGGCACCCCACCTCTCAAACTCAACGTCAACGTCCCACCCTACAAATAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACAGTTGACTACAATATGTCTGATTCAATACCCCTTTTCGTTTGCTGCTCTTCTGTGTCTGTTTCTACAGAGCTTTTCCAGCTGAGGCTTGTGACACTATTGGAGGGGAAACTTGTGATTAAAGCTAAAACCAGAGGCCAAGAAGGGGGCGCAGTGTTTCGGAGCCTGTCGATAGAGAGTATCGACAGTATGACTGTCCCAAGATGTAAGATCTCAACAAAACAACCCATTTGCACCAACTCATTTCTTCGGAGGCTTGTGATGATCTGGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGGGTTTACTATAAAATCTTAACGGGAACCAGGATTTGTAAACAAGGGTTGAGCCCA

Protein sequence

MSNLITIACLIHGLVAFILNRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYNMSDSIPLFVCCSSVSVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESIDSMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVYYKILTGTRICKQGLSP

Homology

[Close]

BLAST of Cp4.1LG17g09380 vs. Swiss-Prot
Match: CRN_ARATH (Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana GN=CRN PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.4e-09
Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
           NRYTDKSDIFSFG+IL VLLTGRDP         + S SGGS+G+WL+   +  E  E  
Sbjct: 298 NRYTDKSDIFSFGMILGVLLTGRDPTHPFC----EESASGGSLGQWLKHLQQSGEARE-- 357

Query: 80  PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
                +L E   ++     LR  +I  S      PSS  L    T+  +F
Sbjct: 358 ALDKTILGEEVEEDEMLMALRITIICLSDFPADRPSSDELVHMLTQLHSF 401

[Close]

BLAST of Cp4.1LG17g09380 vs. TrEMBL
Match: A0A0A0KAB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091860 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+E+SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVEQSVEPRE--- 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCS 119
                  ++ E   +E  +  L  R+       LA    CS
Sbjct: 339 --ALDKTIIGEGMEEEEEEMVLALRIAGVCTSELAEDRPCS 374

[Close]

BLAST of Cp4.1LG17g09380 vs. TrEMBL
Match: E5GB59_CUCME (Receptor-like protein kinase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+++SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVKQSVEPRE-AL 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
           D+    E + E   +E+    LR   + +S L+   P S  L    T+ ++F
Sbjct: 339 DKSIRGEGMEEEEEEEMVL-ALRIAGVCTSELAEDRPCSDELLVMLTQLQSF 388

[Close]

BLAST of Cp4.1LG17g09380 vs. TrEMBL
Match: Q39636_CUCSA (CR9 protein OS=Cucumis sativus GN=CR9 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1


Query: 109 LSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYN 168
           LS+ASPS CSL PPT KS AFS+P RS+ R       + + TL+ KASAVGQDPSTVDY+
Sbjct: 7   LSIASPS-CSLLPPTAKSMAFSIPTRSMPR-------QSKGTLKAKASAVGQDPSTVDYS 66

Query: 169 MSDSIPLFVCCSSV---SVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESID 228
              S+     C +V   +   E++             +K K   ++G +V   +  E + 
Sbjct: 67  SMSSVFPAEACDTVGGEACDVEMYP-----------EVKLKPEAKKGNSVTEPVEREYLQ 126

Query: 229 SMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVY 268
                  K       C +          GGEFCDPEYQKGVY
Sbjct: 127 ---YDSPKTVFPAEACDD---------LGGEFCDPEYQKGVY 137

[Close]

BLAST of Cp4.1LG17g09380 vs. TrEMBL
Match: A0A103XVW0_CYNCS (Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_000022 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.4e-08
Identity = 75/255 (29.41%), Postives = 103/255 (40.39%), Query Frame = 1


Query: 20   NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
            ++YT+KSDIFSFGVIL VLLTGRDP +        G GS G +G W    +E  +  E  
Sbjct: 1204 SKYTEKSDIFSFGVILGVLLTGRDPSDPLFG---IGEGSRGDMGMWFRAVLEAGDGRE-- 1263

Query: 80   PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAFSMPMRSLRRH 139
                 LL E   ++     +R   +  S +    PSS  L P  T+      P       
Sbjct: 1264 ALDKSLLGEEMEEDEMLMAVRIAAVCLSDMPADRPSSDELVPMLTQLHILKPPQ------ 1323

Query: 140  PTSQTQRQRPTLQIKASAVGQDPST-------VDYN-MSDSI-PLFVC--CSSVSVSTEL 199
                 Q   P+++ KA+A     S+       VDYN M+ S+ P   C     V+   E+
Sbjct: 1324 -----QMSTPSIKFKAAASSSSSSSSSDTLPQVDYNSMASSVFPAEACETVGGVACDVEM 1383

Query: 200  FQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESIDSMTVPRCKISTKQPICTNSFLRR 259
            F        E KL  +A+ +             +   S  V R  +    P     F+  
Sbjct: 1384 FP-------ETKLREEAEPKA------------KVTTSQAVDREYVEYNNP--KTVFIAE 1421

Query: 260  LVMIWGGEFCDPEYQ 264
                 GGEFCD  YQ
Sbjct: 1444 ACDDLGGEFCDAAYQ 1421

[Close]

BLAST of Cp4.1LG17g09380 vs. TrEMBL
Match: A0A164TGP6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024629 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-08
Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 1


Query: 21  RYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDRP 80
           RY+DKSDIFSFGVIL +LLTGRDP    L    + + SGGS+GRWL +  E  E  E   
Sbjct: 238 RYSDKSDIFSFGVILGILLTGRDP----LDPFFEETSSGGSLGRWLHQVQEAGEAQE--A 297

Query: 81  CSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
               ++ E   ++     LR  ++  S L    PSS  L P  T+  +F
Sbjct: 298 LDKSIIGEEVEEDEMLMALRIAVVCQSDLPADRPSSDELVPMLTQLHSF 340

[Close]

BLAST of Cp4.1LG17g09380 vs. TAIR10
Match: AT5G13290.2 (AT5G13290.2 Protein kinase superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
           NRYTDKSDIFSFG+IL VLLTGRDP         + S SGGS+G+WL+   +  E  E  
Sbjct: 298 NRYTDKSDIFSFGMILGVLLTGRDPTHPFC----EESASGGSLGQWLKHLQQSGEARE-- 357

Query: 80  PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
                +L E   ++     LR  +I  S      PSS  L    T+  +F
Sbjct: 358 ALDKTILGEEVEEDEMLMALRITIICLSDFPADRPSSDELVHMLTQLHSF 401

[Close]

BLAST of Cp4.1LG17g09380 vs. NCBI nr
Match: gi|449445592|ref|XP_004140556.1| (PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-13
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+E+SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVEQSVEPRE--- 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCS 119
                  ++ E   +E  +  L  R+       LA    CS
Sbjct: 339 --ALDKTIIGEGMEEEEEEMVLALRIAGVCTSELAEDRPCS 374

[Close]

BLAST of Cp4.1LG17g09380 vs. NCBI nr
Match: gi|525506955|ref|NP_001267523.1| (light-regulated protein-like [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1


Query: 109 LSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYN 168
           LS+ASPS CSL PPT KS AFS+P RS+ R       + + TL+ KASAVGQDPSTVDY+
Sbjct: 7   LSIASPS-CSLLPPTAKSMAFSIPTRSMPR-------QSKGTLKAKASAVGQDPSTVDYS 66

Query: 169 MSDSIPLFVCCSSV---SVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESID 228
              S+     C +V   +   E++             +K K   ++G +V   +  E + 
Sbjct: 67  SMSSVFPAEACDTVGGEACDVEMYP-----------EVKLKPEAKKGNSVTEPVEREYLQ 126

Query: 229 SMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVY 268
                  K       C +          GGEFCDPEYQKGVY
Sbjct: 127 ---YDSPKTVFPAEACDD---------LGGEFCDPEYQKGVY 137

[Close]

BLAST of Cp4.1LG17g09380 vs. NCBI nr
Match: gi|659119914|ref|XP_008459910.1| (PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 20  NRYTDKSDIFSFGVILSVLLTGRDP--RERALSNREDGSGSGGSVGRWLEESVEPRELPE 79
           +RYTDKSDI+SFGVIL VLLTGRDP   E+  S+R D SGSGGS+GRW+++SVEPRE   
Sbjct: 279 SRYTDKSDIYSFGVILRVLLTGRDPIETEQVSSDRGDSSGSGGSLGRWVKQSVEPRE-AL 338

Query: 80  DRPCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAF 130
           D+    E + E   +E+    LR   + +S L+   P S  L    T+ ++F
Sbjct: 339 DKSIRGEGMEEEEEEEMVL-ALRIAGVCTSELAEDRPCSDELLVMLTQLQSF 388

[Close]

BLAST of Cp4.1LG17g09380 vs. NCBI nr
Match: gi|659119906|ref|XP_008459906.1| (PREDICTED: light-regulated protein-like [Cucumis melo])

HSP 1 Score: 73.6 bits (179), Expect = 6.4e-10
Identity = 59/162 (36.42%), Postives = 78/162 (48.15%), Query Frame = 1


Query: 109 LSLASPSSCSLFPPTTKSKAFSMPMRSLRRHPTSQTQRQRPTLQIKASAVGQDPSTVDYN 168
           LS+A PS CSL PPT K  AFS+  RSL R       + + TL+ KASAVGQ+PSTVDY+
Sbjct: 7   LSIAPPS-CSLLPPTAKLMAFSIQTRSLPR-------QSQGTLKAKASAVGQEPSTVDYS 66

Query: 169 MSDSIPLFVCCSSV---SVSTELFQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESID 228
              S+     C +V   +   E++             +K K   ++G +V   +  E + 
Sbjct: 67  SMSSVFPAEACDTVGGEACDVEMYP-----------EVKLKPEAKKGSSVTEPVEREYLQ 126

Query: 229 SMTVPRCKISTKQPICTNSFLRRLVMIWGGEFCDPEYQKGVY 268
                  K       C +          GGEFCDPEYQKGVY
Sbjct: 127 ---YDSPKTVFPAEACDD---------LGGEFCDPEYQKGVY 137

[Close]

BLAST of Cp4.1LG17g09380 vs. NCBI nr
Match: gi|976911207|gb|KVH97863.1| (Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-08
Identity = 75/255 (29.41%), Postives = 103/255 (40.39%), Query Frame = 1


Query: 20   NRYTDKSDIFSFGVILSVLLTGRDPRERALSNREDGSGSGGSVGRWLEESVEPRELPEDR 79
            ++YT+KSDIFSFGVIL VLLTGRDP +        G GS G +G W    +E  +  E  
Sbjct: 1204 SKYTEKSDIFSFGVILGVLLTGRDPSDPLFG---IGEGSRGDMGMWFRAVLEAGDGRE-- 1263

Query: 80   PCSDELLSESYSQEVSKHQLRSRLIHSSPLSLASPSSCSLFPPTTKSKAFSMPMRSLRRH 139
                 LL E   ++     +R   +  S +    PSS  L P  T+      P       
Sbjct: 1264 ALDKSLLGEEMEEDEMLMAVRIAAVCLSDMPADRPSSDELVPMLTQLHILKPPQ------ 1323

Query: 140  PTSQTQRQRPTLQIKASAVGQDPST-------VDYN-MSDSI-PLFVC--CSSVSVSTEL 199
                 Q   P+++ KA+A     S+       VDYN M+ S+ P   C     V+   E+
Sbjct: 1324 -----QMSTPSIKFKAAASSSSSSSSSDTLPQVDYNSMASSVFPAEACETVGGVACDVEM 1383

Query: 200  FQLRLVTLLEGKLVIKAKTRGQEGGAVFRSLSIESIDSMTVPRCKISTKQPICTNSFLRR 259
            F        E KL  +A+ +             +   S  V R  +    P     F+  
Sbjct: 1384 FP-------ETKLREEAEPKA------------KVTTSQAVDREYVEYNNP--KTVFIAE 1421

Query: 260  LVMIWGGEFCDPEYQ 264
                 GGEFCD  YQ
Sbjct: 1444 ACDDLGGEFCDAAYQ 1421

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRN_ARATH	5.4e-09	40.91	Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis ...	[more]

BLAST of Cp4.1LG17g09380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAB3_CUCSA	1.9e-13	49.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091860 PE=4 SV=1	[more]
E5GB59_CUCME	1.3e-12	48.21	Receptor-like protein kinase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
Q39636_CUCSA	1.3e-12	38.27	CR9 protein OS=Cucumis sativus GN=CR9 PE=2 SV=1	[more]
A0A103XVW0_CYNCS	2.4e-08	29.41	Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00...	[more]
A0A164TGP6_DAUCA	3.2e-08	41.28	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024629 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g09380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13290.2	3.1e-10	40.91	Protein kinase superfamily protein	[more]

BLAST of Cp4.1LG17g09380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445592\|ref\|XP_004140556.1\|	2.8e-13	49.50	PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cuc...	[more]
gi\|525506955\|ref\|NP_001267523.1\|	1.8e-12	38.27	light-regulated protein-like [Cucumis sativus]	[more]
gi\|659119914\|ref\|XP_008459910.1\|	1.8e-12	48.21	PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Cuc...	[more]
gi\|659119906\|ref\|XP_008459906.1\|	6.4e-10	36.42	PREDICTED: light-regulated protein-like [Cucumis melo]	[more]
gi\|976911207\|gb\|KVH97863.1\|	3.5e-08	29.41	Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009653	anatomical structure morphogenesis
biological_process	GO:0048507	meristem development
biological_process	GO:0008152	metabolic process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0019222	regulation of metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g09380.1	Cp4.1LG17g09380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 21..149 score: 1.6
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 21..150 score: 1.
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 16..68 score: 2.0
None	No IPR available	PANTHER	PTHR27000:SF71	SUBFAMILY NOT NAMED	coord: 16..68 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g09380	CmaCh17G014030	Cucurbita maxima (Rimu)	cmacpeB389
Cp4.1LG17g09380	CmoCh17G013530	Cucurbita moschata (Rifu)	cmocpeB352
Cp4.1LG17g09380	CmoCh08G000250	Cucurbita moschata (Rifu)	cmocpeB851
Cp4.1LG17g09380	Cla001482	Watermelon (97103) v1	cpewmB341
Cp4.1LG17g09380	Csa6G091870	Cucumber (Chinese Long) v2	cpecuB322
Cp4.1LG17g09380	CSPI06G07390	Wild cucumber (PI 183967)	cpecpiB323
Cp4.1LG17g09380	Lsi09G017660	Bottle gourd (USVL1VR-Ls)	cpelsiB249
Cp4.1LG17g09380	MELO3C022355.2	Melon (DHL92) v3.6.1	cpemedB332
Cp4.1LG17g09380	CsaV3_6G007770	Cucumber (Chinese Long) v3	cpecucB0403
Cp4.1LG17g09380	Bhi12G002129	Wax gourd	cpewgoB0389
Cp4.1LG17g09380	Carg03808	Silver-seed gourd	carcpeB1359
Cp4.1LG17g09380	Carg11562	Silver-seed gourd	carcpeB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g09380	Cp4.1LG12g10120	Cucurbita pepo (Zucchini)	cpecpeB170

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g09380	Cucumber (Gy14) v1	cgycpeB0911
Cp4.1LG17g09380	Cucurbita maxima (Rimu)	cmacpeB914
Cp4.1LG17g09380	Watermelon (Charleston Gray)	cpewcgB298
Cp4.1LG17g09380	Melon (DHL92) v3.5.1	cpemeB284
Cp4.1LG17g09380	Cucumber (Gy14) v2	cgybcpeB783